Modify function and keep code workability - python

I'm not a professional coder, but I use Python time to time for my scientific needs. So I want to learn what is the most Pythonic way to do the following:
I'm working with an already existed module, and some class there looks like that
class ATS(Instrument):
def __init__(self, ..., dll_path: str):
...
self._dll = ctypes.cdll.LoadLibrary(dll_path)
...
def _call_dll(self, func_name: str, *args) -> None:
func = getattr(self._dll, func_name)
output = func(*args)
...
I found that I need to use different DLLs to call its own functions (unfortunately, the names of the functions in different DLLs can be the same).
The question is: What is the most Pythonic way to modify that _call_dll function to explicitly specify which DLL I want to use to call a particular function. In the same time, I want to keep workability of the rest of the code, where old version of _call_dll is used.
I see several ways to do this, but I'm not sure which one is most professional and good-styling.
Create its own _call_dll_n function for each dll_n I want to use, but it's not compact and nice.
Add some prefix to the function name to specify DLL, like
class ATS(Instrument):
def __init__(self, ..., dll_path, dll_path_1, ...):
...
self._dll = ctypes.cdll.LoadLibrary(dll_path)
self._dll_1 = ctypes.cdll.LoadLibrary(dll_path_1)
...
def _call_dll(self, pre_func_name: str, *args) -> None:
if prefix_func_name[:5] == 'dll_1':
dll = self._dll_1
func_name = pre_func_name[5:]
func = getattr(dll, func_name)
...
else:
dll = self._dll # Default DLL.
func_name = pre_func_name
Make my_call_dll:
def _my_call_dll(self, func_name: str, dll = None, *args))
if dll is None:
self._call_dll(self, func_name, *args)
else:
dll_bckp = self._dll
self._dll = dll
self._call_dll(self, func_name, *args)
self._dll = dll_bckp
Your help on this particular example is appreciated, but also more general ideas about how to work and modify already existed functions/classes are very welcome.

You don't need to modify the code; the ATS class, as you presented it, already allows for what you've described. Instead: create multiple instances of ATS, each one specifying which DLL to use.
Your description of the problem entails two parts:
A mapping, from some key to the DLL file path.
An API wrapper, allowing you to specify a key into the above mapping when you call the API.
In Python, the built-in ‘dict’ type is the natural way to implement a mapping. You can use a plain string as the key.
import os.path
# You might get the path to your DLL files some other way,
# for example by reading a process environment variable.
# In this example I just hard-code the path root.
dll_file_path_root = os.path.join('/usr/lib', 'ats')
dll_file_paths = {
'foo': os.path.join(dll_file_path_root, 'foo.dll'),
'bar': os.path.join(dll_file_path_root, 'bar_v5.dll'),
'baz': os.path.join(dll_file_path_root, 'super_baz.dll'),
}
The existing ATS class, as you present it above, already implements an API wrapper. Each instance will hold a reference (its internal-use _dll attribute) for which DLL that ATS instance will talk to. The class will initialise each instance of ATS with whatever DLL you specify. So:
# Create an ATS instance that holds a reference to the ‘foo.dll’ library.
foo_ats = ATS(dll_path=dll_file_paths['foo'])
# Create an ATS instance that holds a reference to the ‘bar_v5.dll’ library.
bar_ats = ATS(dll_path=dll_file_paths['bar'])
# Call the ‘lorem’ function in the ‘foo.dll’ library.
foo_ats._call_dll(func_name='lorem')
# Call the ‘lorem’ function in the ‘bar_v5.dll’ library.
bar_ats._call_dll(func_name='lorem')
This is one of the primary benefits of defining classes: They encapsulate the common behaviour of a class of objects, while allowing each object to have individual attributes that differentiate them.

Related

Pickle dynamically generated classes with flexible parent classes?

There are a family of classes for which I wish to optionally extend and override some functionality. For these classes, I wish to add the same functionality, as they are all compatible. I am using Python 3.8+. The way I achieved this was by creating the class as a type with the additional functionality and passing the parent class as the bases. As a basic example:
class A:
def __init__(self, a, **kwargs):
self.a = a
self.params = kwargs
class B:
def __init__(self, b, **kwargs):
self.b = b
self.params = kwargs
def extend_class_with_print_params(base_class):
def print_params(self):
for k, v in self.params.items():
print(k, v)
return type(
f"Extended{base_class.__name__}",
(base_class,),
dict(print_params=print_params),
)
In the above, I define A and B. The function extend_class_with_print_params adds functionality compatible with both. My actual use case is adding pre-train and post-predict hooks to some instances of specific sklearn predictors, which is why I need the parent to be configurable.
import joblib
from test_classes import *
normal_a = A(a=10)
joblib.dump(normal_a, "normal_a")
normal_a = joblib.load("normal_a")
extended_a = extend_class_with_print_params(A)(a=15, alpha=0.1, beta=0.2)
joblib.dump(extended_a, "extended_a")
extended_a = joblib.load("extended_a")
When dumping extended_a, the following error is thrown:
_pickle.PicklingError: Can't pickle <class 'test_classes.ExtendedA'>: it's not found as test_classes.ExtendedA
As suggested in one of the below posts, I attempted setting new_class_name in globals to point to the new class before returning in the function. This allowed me to successfully dump, but not load the file in a different session, which makes sense since the globals would be reset. In general, I would also prefer not to modify globals anyway.
I have tried but failed to work out a solution using __reduce__ based on the following:
Pickling dynamically generated classes?
How can I pickle a dynamically created nested class in python?
Pickle a dynamically parameterized sub-class
I didn't find the above methods clearly to apply to my situation. The content may be relevant and directly applicable, but I failed to find a way.
I'm also entirely open to changing my pattern (even if it means not dynamically defining the class). In short, I have the following requirements:
Extend and override some arbitrary parent class's functionality, but not in all cases, since it will be optional whether to extend/override the class
The objects must be pickle-able
The objects must be pickled using joblib or the pickle library, not something like cloudpickle
It's probably best to avoid dynamically generating a class. Ideally, you can account for added functionality from the beginning. If you have control over classes A and B, you could do a pattern like this:
class A:
hook: Callable
def __init__(self, b, **kwargs):
self.b = b
self.params = kwargs
def print_param_hook(self):
if self.hook:
self.hook(self.params.items())
else:
raise ArithmeticError("No hook function supplied!")
def set_hook(self, hook: Callable):
self.hook = hook
def hook(items):
for k, v in items:
print(k, v)
a = A("foo", y="bar")
a.set_hook(hook1)
a.print_param_hook()
Here, A is defined with a pre-existing method that will call a generic function provided by the user. This, of course, constrains what sort of arguments your hook function can take.
Another option is to make a subclass of A and add your method to the subclass. Continuing the above example:
class SubA(A):
def print_params(self):
for k, v in self.params.items():
print(k, v)
subA = SubA("foo", y="bar")
subA.print_params()
Finally, if you must add an arbitrary method to a class, you can do this using setattr:
def attr_hook(self):
for k, v in self.params.items():
print(k, v)
setattr(A, 'attr_hook', attr_hook)
new_a = A("foo", y="bar")
new_a.attr_hook()
Note that this will affect every instance of A created, including those created before setattr, which isn't super desirable. You can read more about using setattr in this way in this blog post, including how to make a decorator to make it more seamless.
All of the options are completely pickleable:
import pickle
with open("test.pyc", "wb") as file:
pickle.dump(new_a, file)
with open("test.pyc", "rb") as file:
b = pickle.load(file)
b.attr_hook()

Defining same method override on lots of classes: DRY?

Suppose I have a large number of classes defined by an import of a large library codebase, which I don't want to hack around with for reasons of maintainability. They all inherit from BaseClass, and BaseClass contains a method which I want to augment. I think the following is a workable solution
class MyMixin(object):
def method( self, args):
... # 1. a few lines of code copied from BaseClass's def of method
... # 2. some lines of my code that can't go before or after the copied code
... # 3. and the rest of the copied code
class MyAbcClass( MyMixin, AbcClass):
pass
# many similar lines
class MyZzzClass( MyMixin, ZzzClass):
pass
The question. Is there a way to take, say, a list of ("MyXxxClass", XxxClass) tuples, and write code that defines the MyXxxClasses? And is it sufficiently comprehensible that it beats the repetition in the above?
Use three-arg type to define the classes, then set them on the module's global dictionary:
todefine = [('MyAbcClass', AbcClass), ...]
for name, base in todefine:
globals()[name] = type(name, (MyMixin, base), {})
If the names to define follow the fixed pattern you gave (`"My" + base class name), you can repeat yourself even less by dynamically constructing the name to define:
todefine = [AbcClass, ...]
for base in todefine:
name = "My" + base.__name__
globals()[name] = type(name, (MyMixin, base), {})
And if you are trying to wrap all the classes from a given module, you can avoid even explicitly listing the classes by introspecting the module to generate todefine programmatically (if you know the module has or lacks __all__ you can just use the appropriate approach instead of trying one and defaulting to the other):
import inspect
try:
# For modules that define __all__, we want all exported classes
# even if they weren't originally defined in the module
todefine = filter(inspect.isclass, (getattr(somemodule, name) for name in somemodule.__all__))
except AttributeError:
# If __all__ not defined, heuristic approach; exclude private names
# defined with leading underscore, and objects that were imported from
# other modules (so if the module does from itertools import chain,
# we don't wrap chain)
todefine = (obj for name, obj in vars(somemodule).items() if not name.startswith('_') and inspect.isclass(obj) and inspect.getmodule(obj) is somemodule)

Dynamic classes import and object building

I have a python package which gathers multiple modules. In those modules, I have multiple classes heriting from a Component class. I'd like to make the load of those classes dynamic and to build some object dynamically.
ex:
package/module1.py
/module2.py
in module1.py, there is multiple classes heriting from the class Component, the same with module2.py, of course the number of classes and package is unknown. The final user define which object has to be built in a config file. In order to iter throught modules, I use the pkgutil.iter_modules which is working. From my function in charge to build the components, I do like this:
[...]
myPckge = __import__('package.module1', globals(), locals(), ['class1'], -1)
cmpt_object = locals()[component_name](self, component_prefix, *args)
[...]
However, this is not working as the class is not recognized, the following works but is not dynamic:
cmpt_object = myPckge.class1(self, component_prefix, *args)
thanks for your reply
you can use execfile() to load modules on the fly and then use exec() to create new objects from them. But I dont understand why you're doing this!
To find the subclasses of a class in a specified module, you can do something like:
import inspect
def find_subclasses(module, parent_cls):
return [clazz for name, clazz in inspect.getmembers(module)
if inspect.isclass(clazz) and
issubclass(clazz, parent_cls) and
clazz.__module__ == module.__name__ and # do not keep imported classes
clazz is not parent_cls]
Note that parent_cls doesn't have to be the direct parent of a class for it to be returned.
Then you can dynamically load classes from a module, knowing the module's name and directory, and the parent class of the classes you want.
import imp
def load_classes(module_name, module_dir, parent_cls):
fle, path, descr = imp.find_module(module_name, [module_dir])
if fle:
module = imp.load_module(module_name, fle, path, descr)
classes = find_subclasses(module, parent_cls)
return classes
return [] # module not found

How do I extend a python module? Adding new functionality to the `python-twitter` package

What are the best practices for extending an existing Python module – in this case, I want to extend the python-twitter package by adding new methods to the base API class.
I've looked at tweepy, and I like that as well; I just find python-twitter easier to understand and extend with the functionality I want.
I have the methods written already – I'm trying to figure out the most Pythonic and least disruptive way to add them into the python-twitter package module, without changing this modules’ core.
A few ways.
The easy way:
Don't extend the module, extend the classes.
exttwitter.py
import twitter
class Api(twitter.Api):
pass
# override/add any functions here.
Downside : Every class in twitter must be in exttwitter.py, even if it's just a stub (as above)
A harder (possibly un-pythonic) way:
Import * from python-twitter into a module that you then extend.
For instance :
basemodule.py
class Ball():
def __init__(self,a):
self.a=a
def __repr__(self):
return "Ball(%s)" % self.a
def makeBall(a):
return Ball(a)
def override():
print "OVERRIDE ONE"
def dontoverride():
print "THIS WILL BE PRESERVED"
extmodule.py
from basemodule import *
import basemodule
def makeBalls(a,b):
foo = makeBall(a)
bar = makeBall(b)
print foo,bar
def override():
print "OVERRIDE TWO"
def dontoverride():
basemodule.dontoverride()
print "THIS WAS PRESERVED"
runscript.py
import extmodule
#code is in extended module
print extmodule.makeBalls(1,2)
#returns Ball(1) Ball(2)
#code is in base module
print extmodule.makeBall(1)
#returns Ball(1)
#function from extended module overwrites base module
extmodule.override()
#returns OVERRIDE TWO
#function from extended module calls base module first
extmodule.dontoverride()
#returns THIS WILL BE PRESERVED\nTHIS WAS PRESERVED
I'm not sure if the double import in extmodule.py is pythonic - you could remove it, but then you don't handle the usecase of wanting to extend a function that was in the namespace of basemodule.
As far as extended classes, just create a new API(basemodule.API) class to extend the Twitter API module.
Don't add them to the module. Subclass the classes you want to extend and use your subclasses in your own module, not changing the original stuff at all.
Here’s how you can directly manipulate the module list at runtime – spoiler alert: you get the module type from types module:
from __future__ import print_function
import sys
import types
import typing as tx
def modulize(namespace: tx.Dict[str, tx.Any],
modulename: str,
moduledocs: tx.Optional[str] = None) -> types.ModuleType:
""" Convert a dictionary mapping into a legit Python module """
# Create a new module with a trivially namespaced name:
namespacedname: str = f'__dynamic_modules__.{modulename}'
module = types.ModuleType(namespacedname, moduledocs)
module.__dict__.update(namespace)
# Inspect the new module:
name: str = module.__name__
doc: tx.Optional[str] = module.__doc__
contents: str = ", ".join(sorted(module.__dict__.keys()))
print(f"Module name: {name}")
print(f"Module contents: {contents}")
if doc:
print(f"Module docstring: {doc}")
# Add to sys.modules, as per import machinery:
sys.modules.update({ modulename : module })
# Return the new module instance:
return module
… you could then use such a function like so:
ns = {
'func' : lambda: print("Yo Dogg"), # these can also be normal non-lambda funcs
'otherfunc' : lambda string=None: print(string or 'no dogg.'),
'__all__' : ('func', 'otherfunc'),
'__dir__' : lambda: ['func', 'otherfunc'] # usually this’d reference __all__
}
modulize(ns, 'wat', "WHAT THE HELL PEOPLE")
import wat
# Call module functions:
wat.func()
wat.otherfunc("Oh, Dogg!")
# Inspect module:
contents = ", ".join(sorted(wat.__dict__.keys()))
print(f"Imported module name: {wat.__name__}")
print(f"Imported module contents: {contents}")
print(f"Imported module docstring: {wat.__doc__}")
… You could also create your own module subclass, by specifying types.ModuleType as the ancestor of your newly declared class, of course; I have never personally found this necessary to do.
(Also, you don’t have to get the module type from the types module – you can always just do something like ModuleType = type(os) after importing os – I specifically pointed out this one source of the type because it is non-obvious; unlike many of its other builtin types, Python doesn’t offer up access to the module type in the global namespace.)
The real action is in the sys.modules dict, where (if you are appropriately intrepid) you can replace existing modules as well as adding your new ones.
Say you have an older module called mod that you use like this:
import mod
obj = mod.Object()
obj.method()
mod.function()
# and so on...
And you want to extend it, without replacing it for your users. Easily done. You can give your new module a different name, newmod.py or place it by same name at a deeper path and keep the same name, e.g. /path/to/mod.py. Then your users can import it in either of these ways:
import newmod as mod # e.g. import unittest2 as unittest idiom from Python 2.6
or
from path.to import mod # useful in a large code-base
In your module, you'll want to make all the old names available:
from mod import *
or explicitly name every name you import:
from mod import Object, function, name2, name3, name4, name5, name6, name7, name8, name9, name10, name11, name12, name13, name14, name15, name16, name17, name18, name19, name20, name21, name22, name23, name24, name25, name26, name27, name28, name29, name30, name31, name32, name33, name34, name35, name36, name37, name38, name39
I think the import * will be more maintainable for this use-case - if the base module expands functionality, you'll seamlessly keep up (though you might shade new objects with the same name).
If the mod you are extending has a decent __all__, it will restrict the names imported.
You should also declare an __all__ and extend it with the extended module's __all__.
import mod
__all__ = ['NewObject', 'newfunction']
__all__ += mod.__all__
# if it doesn't have an __all__, maybe it's not good enough to extend
# but it could be relying on the convention of import * not importing
# names prefixed with underscores, (_like _this)
Then extend the objects and functionality as you normally would.
class NewObject(object):
def newmethod(self):
"""this method extends Object"""
def newfunction():
"""this function builds on mod's functionality"""
If the new objects provide functionality you intend to replace (or perhaps you are backporting the new functionality into an older code base) you can overwrite the names
May I suggest not to reinvent the Wheel here? I'm building a >6k line Twitter Client for 2 month now, at first I checked python-twitter too, but it's lagging a lot behind the recent API changes,, Development doesn't seem to be that active either, also there was(at least when I last checked) no support for OAuth/xAuth).
So after searching around a bit more I discovered tweepy:
http://github.com/joshthecoder/tweepy
Pros: Active development, OAauth/xAuth and up to date with the API.
Chances are high that what you need is already in there.
So I suggest going with that, it's working for me, the only thing I had to add was xAuth(that got merge back to tweepy :)
Oh an a shameless plug, if you need to parse Tweets and/or format them to HTML use my python version of the twitter-text-* libraries:
http://github.com/BonsaiDen/twitter-text-python
This thing is unittestetd an guaranteed to parse Tweets just like Twitter.com does it.
Define a new class, and instead of inherit it from the class you want to extend from the original module, add an instance of the original class as an attribute to your new class.
And here comes the trick: intercept all non-existing method calls on your new class and try to call it on the instance of the old class.
In your NewClass just define new or overridden methods as you like:
import originalmodule
class NewClass:
def __init__(self, *args, **kwargs):
self.old_class_instance = originalmodule.create_oldclass_instance(*args, **kwargs)
def __getattr__(self, methodname):
"""This is a wrapper for the original OldClass class.
If the called method is not part of this NewClass class,
the call will be intercepted and replaced by the method
in the original OldClass instance.
"""
def wrapper(*args, **kwargs):
return getattr(self.old_class_instance, methodname)(*args, **kwargs)
return wrapper
def new_method(self, arg1):
"""Does stuff with the OldClass instance"""
thing = self.old_class_instance.get_somelist(arg1)
# returns the first element only
return thing[0]
def overridden_method(self):
"""Overrides an existing method, if OldClass has a method with the same name"""
print("This message is coming from the NewClass and not from the OldClass")
In my case I used this solution when simple inheritance from the old class was not possible, because an instance had to be created not by its constructor, but with an init script from an other class/module. (It is the originalmodule.create_oldclass_instance in the example above.)

Dynamic function docstring

I'd like to write a python function that has a dynamically created docstring. In essence for a function func() I want func.__doc__ to be a descriptor that calls a custom __get__ function create the docstring on request. Then help(func) should return the dynamically generated docstring.
The context here is to write a python package wrapping a large number of command line tools in an existing analysis package. Each tool becomes a similarly named module function (created via function factory and inserted into the module namespace), with the function documentation and interface arguments dynamically generated via the analysis package.
You can't do what you're looking to do, in the way you want to do it.
From your description it seems like you could do something like this:
for tool in find_tools():
def __tool(*arg):
validate_args(tool, args)
return execute_tool(tool, args)
__tool.__name__ = tool.name
__tool.__doc__ = compile_docstring(tool)
setattr(module, tool.name, __tool)
i.e. create the documentation string dynamically up-front when you create the function.
Is the a reason why the docstring has to be dynamic from one call to __doc__ to the next?
Assuming there is, you'll have to wrap your function up in a class, using __call__ to trigger the action.
But even then you've got a problem. When help() is called to find the docstring, it is called on the class, not the instance, so this kind of thing:
class ToolWrapper(object):
def __init__(self, tool):
self.tool = tool
self.__name__ = tool.name
def _get_doc(self):
return compile_docstring(self.tool)
__doc__ = property(_get_doc)
def __call__(self, *args):
validate_args(args)
return execute_tool(tool, args)
won't work, because properties are instance, not class attributes. You can make the doc property work by having it on a metaclass, rather than the class itself
for tool in find_tools():
# Build a custom meta-class to provide __doc__.
class _ToolMetaclass(type):
def _get_doc(self):
return create_docstring(tool)
__doc__ = property(_get_doc)
# Build a callable class to wrap the tool.
class _ToolWrapper(object):
__metaclass__ = _ToolMetaclass
def _get_doc(self):
return create_docstring(tool)
__doc__ = property(_get_doc)
def __call__(self, *args):
validate_args(tool, args)
execute_tool(tool, args)
# Add the tool to the module.
setattr(module, tool.name, _ToolWrapper())
Now you can do
help(my_tool_name)
and get the custom docstring, or
my_tool_name.__doc__
for the same thing. The __doc__ property is in the _ToolWrapper class is needed to trap the latter case.
(Python 3 solution)
You could make use of Python's duck typing to implement a dynamic string:
import time
def fn():
pass
class mydoc( str ):
def expandtabs( self, *args, **kwargs ):
return "this is a dynamic strting created on {}".format( time.asctime() ).expandtabs( *args, **kwargs )
fn.__doc__ = mydoc()
help( fn )
Caveats:
This assumes that the help function is calling .expandtabs to get the text from the __doc__ object, which works in Python 3.7. A more robust solution would implement the other str methods in order to have our duck continue acting like a duck even if the help method changes. Also note that our mydoc class derives from str, this is because help, somewhat atypically, enforces strong typing by asserting isinstance(thing.__doc__, str). Like all solutions this is a bit hacky, but whether this is a problem largely depends on the full project requirements.
Instead of messing with the function, why not write your own help function?
my_global=42
def help(func):
print('%s: my_global=%s'%(func.func_name,my_global))
def foo():
pass
help(foo)

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