Develop Reference

Python - build application for mac with pyqt5

Welcome, I have a written program in Python with using PyQt5, a problem lies in that I want to build him to form of one file EXE for Windows which I was able to make with a help of pyinstaller and everything is working well on freshly installed system without any additional installations, but I have a problem with MacOS when I'm trying to do it with pyInstaller or py2app I'm getting errors during the opening of file .app
I've tried those commands:
PyInstaller:
pyinstaller --windowed --onefile filename.spec
(Link to file .spec is under)
When starting application (after a while) is closing without any error
Py2App:
python setup.py py2app
(Link to file setup.py is under)
During performing this command we can see that all libraries of type PyQt5 are added and application have weight of 196 MB so they're there but at startup I'm getting a error report (Link to this report under)
If I use command "python setup.py py2app -A' then application is working but it's taking only 222kb and I can assume that on this computer which an application will be running there has to be all libraries. And I want to avoid it.
I want to get one file which I'm sending to 1 person and without any installations of additional libraries application is starting up.
Setup.py:
from setuptools import setup
APP=['nazwa_pliku.py']
OPTIONS = {
'argv_emulation': True,
'includes': [
'PyQt5', 'PyQt5.QtCore', 'PyQt5.QtGui', 'PyQt5.QtWidgets',
'getmac', 'requests', 'shutil', 'zipfile', 'hashlib'
]
}
DATA_FILES = [('', ['resources'])]
setup(
app=APP,
options={'py2app': OPTIONS},
data_files=DATA_FILES,
setup_requires=['py2app']
)
PyInstaller (.spec):
# -*- mode: python ; coding: utf-8 -*-
block_cipher = None
a = Analysis(['nazwa_pliku.py'],
pathex=['PyQt5', 'PyQt5.QtCore', 'PyQt5.QtGui', 'PyQt5.QtWidgets', 'getmac', 'requests', 'shutil', 'zipfile', 'hashlib'],
binaries=[],
datas=[],
hiddenimports=[],
hookspath=[],
hooksconfig={},
runtime_hooks=[],
excludes=[],
win_no_prefer_redirects=False,
win_private_assemblies=False,
cipher=block_cipher,
noarchive=False)
pyz = PYZ(a.pure, a.zipped_data,
cipher=block_cipher)
exe = EXE(pyz,
a.scripts,
a.binaries,
a.zipfiles,
a.datas,
[],
name='nazwa_pliku',
debug=False,
bootloader_ignore_signals=False,
strip=False,
upx=True,
upx_exclude=[],
runtime_tmpdir=None,
console=False,
disable_windowed_traceback=False,
target_arch=None,
codesign_identity=None,
entitlements_file=None )
app = BUNDLE(exe,
name='nazwa_pliku.app',
icon=None,
bundle_identifier=None)
Problem report:
Process: nazwa_pliku [1657]
Path: /Users/USER/Downloads/*/nazwa_pliku.app/Contents/MacOS/nazwa_pliku
Identifier: org.pythonmac.unspecified.nazwa_pliku
Version: 0.0.0 (0.0.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: nazwa_pliku [1657]
User ID: 501
Date/Time: 2022-01-27 08:27:10.807 -0800
OS Version: macOS 11.0.1 (20B29)
Report Version: 12
Anonymous UUID: B619491E-F16C-B54A-87DC-CEF880698C90
Time Awake Since Boot: 1200 seconds
System Integrity Protection: enabled
Crashed Thread: 0 Dispatch queue: com.apple.main-thread
Exception Type: EXC_CRASH (SIGABRT)
Exception Codes: 0x0000000000000000, 0x0000000000000000
Exception Note: EXC_CORPSE_NOTIFY
Application Specific Information:
abort() called
Thread 0 Crashed:: Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff202f8462 __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff20326610 pthread_kill + 263
2 libsystem_c.dylib 0x00007fff20279720 abort + 120
3 QtCore 0x0000000106d19529 qt_message_fatal(QtMsgType, QMessageLogContext const&, QString const&) + 9
4 QtCore 0x0000000106d1ac74 QMessageLogger::fatal(char const*, ...) const + 202
5 QtGui 0x00000001067273d9 QGuiApplicationPrivate::createPlatformIntegration() + 7193
6 QtGui 0x00000001067273fb QGuiApplicationPrivate::createEventDispatcher() + 27
7 QtCore 0x0000000106ef91af QCoreApplicationPrivate::init() + 1599
8 QtGui 0x0000000106721b59 QGuiApplicationPrivate::init() + 57
9 QtWidgets 0x000000010613cada QApplicationPrivate::init() + 26
10 QtWidgets.abi3.so 0x0000000105db55d8 0x105c6a000 + 1357272
11 sip.cpython-310-darwin.so 0x000000010735175b 0x10734b000 + 26459
12 org.python.python 0x0000000104e2cdf5 0x104d1b000 + 1121781
13 org.python.python 0x0000000104da1fe7 _PyObject_MakeTpCall + 135
14 org.python.python 0x0000000104ee322d 0x104d1b000 + 1868333
15 org.python.python 0x0000000104ed8635 _PyEval_EvalFrameDefault + 19717
16 org.python.python 0x0000000104ed1fe2 0x104d1b000 + 1798114
17 org.python.python 0x0000000104ee316f 0x104d1b000 + 1868143
18 org.python.python 0x0000000104ed8635 _PyEval_EvalFrameDefault + 19717
19 org.python.python 0x0000000104ed1fe2 0x104d1b000 + 1798114
20 org.python.python 0x0000000104ecc2db 0x104d1b000 + 1774299
21 org.python.python 0x0000000104e08ca6 0x104d1b000 + 973990
22 org.python.python 0x0000000104ee316f 0x104d1b000 + 1868143
23 org.python.python 0x0000000104ed8635 _PyEval_EvalFrameDefault + 19717
24 org.python.python 0x0000000104ed1fe2 0x104d1b000 + 1798114
25 org.python.python 0x0000000104ee316f 0x104d1b000 + 1868143
26 org.python.python 0x0000000104ed8635 _PyEval_EvalFrameDefault + 19717
27 org.python.python 0x0000000104ed1fe2 0x104d1b000 + 1798114
28 org.python.python 0x0000000104f4736d 0x104d1b000 + 2278253
29 org.python.python 0x0000000104f46b2d _PyRun_SimpleFileObject + 365
30 org.python.python 0x0000000104f4a5cd PyRun_SimpleFileExFlags + 109
31 org.pythonmac.unspecified.nazwa_pliku 0x0000000102fbbec5 0x102fb7000 + 20165
32 org.pythonmac.unspecified.nazwa_pliku 0x0000000102fba357 main + 257
33 libdyld.dylib 0x00007fff20341631 start + 1
Thread 1:
0 libsystem_pthread.dylib 0x00007fff20322458 start_wqthread + 0
Thread 2:
0 libsystem_pthread.dylib 0x00007fff20322458 start_wqthread + 0
Thread 3:
0 libsystem_pthread.dylib 0x00007fff20322458 start_wqthread + 0
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x0000000112224e00 rcx: 0x00007ffeecc45348 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x0000000000000006 rbp: 0x00007ffeecc45370 rsp: 0x00007ffeecc45348
r8: 0x00000000000130a8 r9: 0x00007fff88a9fe68 r10: 0x0000000112224e00 r11: 0x0000000000000246
r12: 0x0000000000000307 r13: 0x0000000107283658 r14: 0x0000000000000006 r15: 0x0000000000000016
rip: 0x00007fff202f8462 rfl: 0x0000000000000246 cr2: 0x00007fc002ca6000
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Thread 0 instruction stream not available.
Thread 0 last branch register state not available.
Binary Images:
0x102fb7000 - 0x102fbefff +org.pythonmac.unspecified.nazwa_pliku (0.0.0 - 0.0.0) <ABECB05C-E91D-336E-81D6-4A467D071EE8> /Users/USER/Downloads/*/nazwa_pliku.app/Contents/MacOS/nazwa_pliku
0x104d1b000 - 0x105092fff +org.python.python (3.10.1, [c] 2001-2021 Python Software Foundation. - 3.10.1) <1071A8DD-3E3D-3958-95BF-BA33F1F82BE5> /Users/USER/Downloads/*/nazwa_pliku.app/Contents/Frameworks/Python.framework/Versions/3.10/Python
0x105304000 - 0x10530bfff +zlib.cpython-310-darwin.so (0) <87FA5122-1EC5-3030-B8B6-D9F6A4EE2EA8> /Users/USER/Downloads/*/nazwa_pliku.app/Contents/Resources/zlib.cpython-310-darwin.so
0x105417000 - 0x10542afff +_ctypes.so (0) <A0E1A89B-9D11-36E4-9D58-393EBF9F0D8A> /Users/USER/Downloads/*/nazwa_pliku.app/Contents/Resources/lib/python3.10/lib-dynload/_ctypes.so
0x105438000 - 0x10543ffff +_struct.so (0) <9399186E-C4E1-3BC6-9DB3-FB26E3BF1AA3> /Users/USER/Downloads/*/nazwa_pliku.app/Contents/Resources/lib/python3.10/lib-dynload/_struct.so
0x105acc000 - 0x105ae7fff +_pickle.so (0) <FDD8E805-90D8-39A2-838D-B1EFCE959BD7> /Users/USER/Downloads/*/nazwa_pliku.app/Contents/Resources/lib/python3.10/lib-dynload/_pickle.so
0x105af5000 - 0x105b04fff +_socket.so (0) <92B8B527-7B8F-318E-B2A5-7DF9472FD531> /Users/USER/Downloads/*/nazwa_pliku.app/Contents/Resources/lib/python3.10/lib-dynload/_socket.so
0x105b11000 - 0x105b1cfff +math.so (0) <66D1DAE5-3559-30ED-826D-9B2143C1BB28> /Users/USER/Downloads/*/nazwa_pliku.app/Contents/Resources/lib/python3.10/lib-dynload/math.so
0x105b28000 - 0x105b2ffff +select.so (0) <988B1C8F-D008-3880-8A84-32E5B631D225>
Thanks in advance

py2app build errors Terminating app due to uncaught exception 'NSInvalidArgumentException'

I am new to building standalone files using py2app for MacOS. I am getting the following error when I launch the app after the build
Terminating app due to uncaught exception 'NSInvalidArgumentException' reason: '-[__NSCFString count]: unrecognized selector sent to instance 0x6000026004e0'
I would highly appreciate if someone points me how to resolve this issue.
Below is my setup file
from setuptools import setup
APP = ['jarvis_starter.py']
DATA_FILES = ['Template2.pptx']
OPTIONS = {'iconfile':'jarvislogo.icns',
'argv_emulation': True,
'packages': 'certifi',
'plist': {
'PyRuntimeLocations':'/Library/Frameworks/Python.framework/Versions/3.7/lib/libpython3.7.dylib',
'LSPrefersPPC':True,
}
}
setup(
app=APP,
data_files=DATA_FILES,
options={'py2app': OPTIONS},
setup_requires=['py2app'],
)
I am posting error log below
Path: /Users/USER/Documents/*/jarvis_starter.app/Contents/MacOS/jarvis_starter
Identifier: org.pythonmac.unspecified.jarvis_starter
Version: 0.0.0 (0.0.0)
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: jarvis_starter [64308]
User ID: 501
Date/Time: 2020-01-26 17:59:07.513 -0800
OS Version: Mac OS X 10.15.2 (19C57)
Report Version: 12
Bridge OS Version: 3.0 (14Y908)
Anonymous UUID: 0333FAC2-3E0F-7B44-E2C1-9EEFF2508FB0
Sleep/Wake UUID: E6B1DB47-C4DB-424F-834B-90F142B2FBF5
Time Awake Since Boot: 390000 seconds
Time Since Wake: 700 seconds
System Integrity Protection: enabled
Crashed Thread: 0 Dispatch queue: com.apple.main-thread
Exception Type: EXC_CRASH (SIGABRT)
Exception Codes: 0x0000000000000000, 0x0000000000000000
Exception Note: EXC_CORPSE_NOTIFY
Application Specific Information:
*** Terminating app due to uncaught exception 'NSInvalidArgumentException', reason: '-[__NSCFString count]: unrecognized selector sent to instance 0x6000026004e0'
abort() called
terminating with uncaught exception of type NSException
Application Specific Backtrace 1:
0 CoreFoundation 0x00007fff2bfd48ab __exceptionPreprocess + 250
1 libobjc.A.dylib 0x00007fff62245805 objc_exception_throw + 48
2 CoreFoundation 0x00007fff2c053b61 -[NSObject(NSObject) __retain_OA] + 0
3 CoreFoundation 0x00007fff2bf38adf ___forwarding___ + 1427
4 CoreFoundation 0x00007fff2bf384b8 _CF_forwarding_prep_0 + 120
5 jarvis_starter 0x0000000100001674 py2app_main + 372
6 jarvis_starter 0x0000000100000f48 main + 344
7 jarvis_starter 0x0000000100000dc4 start + 52
8 ??? 0x0000000000000001 0x0 + 1
Thread 0 Crashed:: Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff636fa7fa __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff637b7bc1 pthread_kill + 432
2 libsystem_c.dylib 0x00007fff63681a1c abort + 120
3 libc++abi.dylib 0x00007fff6071fbe8 abort_message + 231
4 libc++abi.dylib 0x00007fff6071fd9c demangling_terminate_handler() + 262
5 libobjc.A.dylib 0x00007fff6224778a _objc_terminate() + 96
6 libc++abi.dylib 0x00007fff6072cdc7 std::__terminate(void (*)()) + 8
7 libc++abi.dylib 0x00007fff6072cb6c __cxxabiv1::failed_throw(__cxxabiv1::__cxa_exception*) + 27
8 libc++abi.dylib 0x00007fff6071e45d __cxa_throw + 113
9 libobjc.A.dylib 0x00007fff62245933 objc_exception_throw + 350
10 com.apple.CoreFoundation 0x00007fff2c053b61 -[NSObject(NSObject) doesNotRecognizeSelector:] + 132
11 com.apple.CoreFoundation 0x00007fff2bf38adf ___forwarding___ + 1427
12 com.apple.CoreFoundation 0x00007fff2bf384b8 _CF_forwarding_prep_0 + 120
13 org.pythonmac.unspecified.jarvis_starter 0x0000000100001674 py2app_main + 372
14 org.pythonmac.unspecified.jarvis_starter 0x0000000100000f48 main + 344
15 org.pythonmac.unspecified.jarvis_starter 0x0000000100000dc4 start + 52
Thread 1:
0 libsystem_pthread.dylib 0x00007fff637b3818 start_wqthread + 0
Thread 2:
0 libsystem_pthread.dylib 0x00007fff637b3818 start_wqthread + 0
Thread 3:
0 libsystem_pthread.dylib 0x00007fff637b3818 start_wqthread + 0
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x0000000109351dc0 rcx: 0x00007ffeefbfbfe8 rdx: 0x0000000000000000
rdi: 0x0000000000000307 rsi: 0x0000000000000006 rbp: 0x00007ffeefbfc010 rsp: 0x00007ffeefbfbfe8
r8: 0x00007ffeefbfbeb0 r9: 0x00007ffeefbfc080 r10: 0x0000000109351dc0 r11: 0x0000000000000246
r12: 0x0000000000000307 r13: 0x0000003000000008 r14: 0x0000000000000006 r15: 0x0000000000000016
rip: 0x00007fff636fa7fa rfl: 0x0000000000000246 cr2: 0x0000000000000000
Logical CPU: 0
Error Code: 0x00000000
Trap Number: 0
Binary Images:
0x100000000 - 0x100005fff +org.pythonmac.unspecified.jarvis_starter (0.0.0 - 0.0.0) <E4EAF2F4-CF49-3C47-B544-F79C80860A1D> /Users/USER/Documents/*/jarvis_starter.app/Contents/MacOS/jarvis_starter
0x109288000 - 0x109318cb7 dyld (733.8) <EEA931D0-403E-3BC8-862A-CBA037DE4A74> /usr/lib/dyld
0x7fff27c7d000 - 0x7fff27c7dfff com.apple.Accelerate (1.11 - Accelerate 1.11) <EEBE6680-1AAB-3192-AA7C-450537B07F27> /System/Library/Frameworks/Accelerate.framework/Versions/A/Accelerate
0x7fff27c95000 - 0x7fff28300fef com.apple.vImage (8.1 - 524.2) <2BDE5231-B5ED-313E-918A-876ACE1C0FCF> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vImage.framework/Versions/A/vImage
0x7fff28301000 - 0x7fff2856afff libBLAS.dylib (1303.60.1) <94F6B3C0-5039-3F66-8B2E-98791287E459> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
0x7fff2856b000 - 0x7fff2885aff7 libBNNS.dylib (144.40.3) <F15D7D9E-0B9F-34FF-B144-DCA264614C54> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBNNS.dylib
0x7fff2885c000 - 0x7fff28c01fff libLAPACK.dylib (1303.60.1) <DCC36295-FF39-35A1-8DF1-1E8A714E2265> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib
0x7fff28c02000 - 0x7fff28c17ff8 libLinearAlgebra.dylib (1303.60.1) <E3C0CC64-906B-3B44-B8AA-3075BA20E161> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLinearAlgebra.dylib
0x7fff28c18000 - 0x7fff28c1dff3 libQuadrature.dylib (7) <17EC31E3-3D77-3B5A-8ADD-6A3DBC1531E7> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libQuadrature.dylib
0x7fff28c1e000 - 0x7fff28c8efff libSparse.dylib (103) <350DAE1C-C990-343F-A98A-1B4317EAA869> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libSparse.dylib
0x7fff28c8f000 - 0x7fff28ca1fef libSparseBLAS.dylib (1303.60.1) <8C0C7291-AC3A-3808-9D45-E359A5E03F0E> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libSparseBLAS.dylib
0x7fff28ca2000 - 0x7fff28e7bffb libvDSP.dylib (735.40.1) <BD49856D-39CE-397F-A069-

Mac : Application exited with code 255, illegal signal 0X04

I am working on a python app which includes a CEFPython3 browser inside the app. The app is getting correctly compiled and when I run our_app.py, everything works just fine. But when I package it with py2app, then I get these errors. What exactly is the problem? I tried searching other threads, but each user seems to have a different issue.
Note : In our app, we are setting a flag for GPU for CEFPython3 as disable-gpu=true
Error log :
{\rtf1\ansi\ansicpg1252\cocoartf1561\cocoasubrtf200
{\fonttbl\f0\fswiss\fcharset0 Helvetica;}
{\colortbl;\red255\green255\blue255;}
{\*\expandedcolortbl;;}
\paperw11900\paperh16840\margl1440\margr1440\vieww28600\viewh15000\viewkind0
\pard\tx566\tx1133\tx1700\tx2267\tx2834\tx3401\tx3968\tx4535\tx5102\tx5669\tx6236\tx6803\pardirnatural\partightenfactor0
\f0\fs24 \cf0 May 24 13:04:48 Akshays-MacBook-Air syslogd[46]: ASL Sender Statistics\
May 24 13:05:28 Akshays-MacBook-Air com.apple.xpc.launchd[1] (org.pythonmac.unspecified.APP_NAME.12348[954]): Service exited with abnormal code: 255\
May 24 13:05:37 Akshays-MacBook-Air sudo[964]: akshaysulakhe : TTY=ttys000 ; PWD=/Users/akshaysulakhe/Downloads/APP_NAMEwx ; USER=root ; COMMAND=/sbin/dmesg\
May 24 13:05:51 Akshays-MacBook-Air sudo[971]: akshaysulakhe : TTY=ttys000 ; PWD=/Users/akshaysulakhe/Downloads/APP_NAMEwx ; USER=root ; COMMAND=/sbin/dmesg\
May 24 13:06:09 Akshays-MacBook-Air com.apple.xpc.launchd[1] (com.apple.quicklook[973]): Endpoint has been activated through legacy launch(3) APIs. Please switch to XPC or bootstrap_check_in(): com.apple.quicklook\
May 24 13:07:04 Akshays-MacBook-Air sudo[974]: akshaysulakhe : TTY=ttys000 ; PWD=/Users/akshaysulakhe/Downloads/APP_NAMEwx ; USER=root ; COMMAND=/bin/launchctl remove com.cylance.agent_service\
May 24 13:07:10 Akshays-MacBook-Air com.apple.xpc.launchd[1] (org.pythonmac.unspecified.APP_NAME.12352[966]): Service exited with abnormal code: 255\
May 24 13:07:14 Akshays-MacBook-Air com.apple.xpc.launchd[1] (org.pythonmac.unspecified.APP_NAME.12356[976]): Service exited with abnormal code: 255\
May 24 13:07:19 Akshays-MacBook-Air com.apple.xpc.launchd[1] (com.apple.quicklook[981]): Endpoint has been activated through legacy launch(3) APIs. Please switch to XPC or bootstrap_check_in(): com.apple.quicklook\
May 24 13:07:35 Akshays-MacBook-Air com.apple.xpc.launchd[1] (org.pythonmac.unspecified.APP_NAME.12356[987]): Service exited with abnormal code: 255\
May 24 13:08:30 Akshays-MacBook-Air com.apple.xpc.launchd[1] (com.apple.quicklook[992]): Endpoint has been activated through legacy launch(3) APIs. Please switch to XPC or bootstrap_check_in(): com.apple.quicklook\
May 24 13:09:27 Akshays-MacBook-Air TextEdit[993]: assertion failed: 17D102: libxpc.dylib + 72637 [F7E5F1BC-614B-39CB-B6CE-92A9C7B7EC0B]: 0x89\
May 24 13:09:28 Akshays-MacBook-Air com.apple.xpc.launchd[1] (com.apple.imfoundation.IMRemoteURLConnectionAgent): Unknown key for integer: _DirtyJetsamMemoryLimit\
May 24 13:12:19 Akshays-MacBook-Air com.apple.xpc.launchd[1] (com.apple.imfoundation.IMRemoteURLConnectionAgent): Unknown key for integer: _DirtyJetsamMemoryLimit\
}
Crash_log :
{\rtf1\ansi\ansicpg1252\cocoartf1561\cocoasubrtf200
{\fonttbl\f0\fswiss\fcharset0 Helvetica;}
{\colortbl;\red255\green255\blue255;}
{\*\expandedcolortbl;;}
\paperw11900\paperh16840\margl1440\margr1440\vieww10800\viewh8400\viewkind0
\pard\tx566\tx1133\tx1700\tx2267\tx2834\tx3401\tx3968\tx4535\tx5102\tx5669\tx6236\tx6803\pardirnatural\partightenfactor0
\f0\fs24 \cf0 Process: APP_NAME [846]\
Path: /Users/USER/Downloads/*/APP_NAME.app/Contents/MacOS/APP_NAME\
Identifier: org.pythonmac.unspecified.APP_NAME\
Version: 0.0.0 (0.0.0)\
Code Type: X86-64 (Native)\
Parent Process: ??? [1]\
Responsible: APP_NAME [846]\
User ID: 501\
\
Date/Time: 2018-05-24 12:44:16.609 +0530\
OS Version: Mac OS X 10.13.3 (17D102)\
Report Version: 12\
Anonymous UUID: 83F4A79A-60D6-23EF-2BDC-2B052BA014A7\
\
Sleep/Wake UUID: CE376F54-DDE9-4CB5-960D-A08762CAFD0C\
\
Time Awake Since Boot: 7900 seconds\
Time Since Wake: 1900 seconds\
\
System Integrity Protection: enabled\
\
Crashed Thread: 0 Dispatch queue: com.apple.main-thread\
\
Exception Type: EXC_BAD_INSTRUCTION (SIGILL)\
Exception Codes: 0x0000000000000001, 0x0000000000000000\
Exception Note: EXC_CORPSE_NOTIFY\
\
Termination Signal: Illegal instruction: 4\
Termination Reason: Namespace SIGNAL, Code 0x4\
Terminating Process: exc handler [0]\
\
Thread 0 Crashed:: Dispatch queue: com.apple.main-thread\
0 org.chromium.ContentShell.framework 0x0000000107e5e1f7 0x106a38000 + 21127671\
1 org.chromium.ContentShell.framework 0x0000000107e87e4e 0x106a38000 + 21298766\
2 org.chromium.ContentShell.framework 0x0000000107e87c44 0x106a38000 + 21298244\
3 org.chromium.ContentShell.framework 0x0000000106a3a2c4 cef_initialize + 276\
4 cefpython_py36.so 0x0000000106931213 CefInitialize(CefMainArgs const&, CefStructBase<CefSettingsTraits> const&, scoped_refptr<CefApp>, void*) + 163\
5 cefpython_py36.so 0x00000001068d20ff __pyx_pf_14cefpython_py36_22Initialize(_object*, _object*, _object*, _object*) + 43535\
6 cefpython_py36.so 0x00000001068c74d4 __pyx_pw_14cefpython_py36_23Initialize(_object*, _object*, _object*) + 164\
7 org.python.python 0x0000000101867685 _PyCFunction_FastCallDict + 229\
8 org.python.python 0x00000001018678a8 _PyCFunction_FastCallKeywords + 136\
9 org.python.python 0x00000001018f05e4 call_function + 612\
10 org.python.python 0x00000001018f2506 _PyEval_EvalFrameDefault + 6918\
11 org.python.python 0x00000001018f032e fast_function + 606\
VIRTUAL REGION \
REGION TYPE SIZE COUNT (non-coalesced) \
=========== ======= ======= \
Activity Tracing 256K 2 \
CoreUI image file 116K 2 \
Kernel Alloc Once 8K 2 \
MALLOC 52.9M 46 \
MALLOC guard page 32K 9 \
MALLOC_LARGE (reserved) 512K 3 reserved VM address space (unallocated)\
STACK GUARD 56.0M 7 \
Stack 10.5M 7 \
VM_ALLOCATE 40K 4 \
__DATA 40.6M 321 \
__FONT_DATA 4K 2 \
__LINKEDIT 201.1M 36 \
__TEXT 329.0M 319 \
__UNICODE 560K 2 \
mapped file 33.5M 5 \
shared memory 628K 10 \
=========== ======= ======= \
TOTAL 725.8M 761 \
TOTAL, minus reserved VM space 725.3M 761 \
\
}
setup.py from py2app :
from setuptools import setup
APP = ['Our_APP.py']
DATA_FILES = []
OPTIONS = {}
setup(
app=APP,
data_files=DATA_FILES,
options={'py2app': OPTIONS},
setup_requires=['py2app','cefpython3'],
)

See how the exit code 255 is handled in the wxpython.py example:
if MAC:
# On Mac things work differently, other steps are required
self.browser.CloseBrowser()
self.clear_browser_references()
self.Destroy()
global g_count_windows
g_count_windows -= 1
if g_count_windows == 0:
cef.Shutdown()
wx.GetApp().ExitMainLoop()
# Call _exit otherwise app exits with code 255 (Issue #162).
# noinspection PyProtectedMember
os._exit(0)
Full source:
https://github.com/cztomczak/cefpython/blob/2fb9ae156802c12b9941f61661318386dbf3bfe2/examples/wxpython.py#L167
Corresponding issue in the tracker:
https://github.com/cztomczak/cefpython/issues/162

High Sierra + Python + Postgresql error: Illegal instruction: 4

I can connect to Postgres via the command line no problem, however if I try to connect via Python using the psycopg2 module I get the error below. Interestingly I have just tried connecting with PSeqal.app and it crashes with the same error.
Environment:
MacOS: 10.13.3
Xcode 9.2
Python: 3.6.4
Connection module: psycopg2
Postgresql: 10.3
Script:
Here is my simple connection script which is trying to connect via Python to Postgresql:
def connect(self, params):
""" Connect to the PostgreSQL database server """
conn = None
try:
# connect to the PostgreSQL server
logging.info('Connecting to the PostgreSQL database...')
conn = psycopg2.connect(**params)
# create a cursor
self.cursor = conn.cursor()
except (Exception, psycopg2.DatabaseError) as error:
print(error)
finally:
if conn is not None:
conn.close()
logging.warning('Database connection closed.')
Error:
Script output:
$ python3 testdb.py
Illegal instruction: 4
Apple error (partial):
Process: Python [79534]
Path: /usr/local/Cellar/python3/3.6.4_2/Frameworks/Python.framework/Versions/3.6/Resources/Python.app/Contents/MacOS/Python
Identifier: Python
Version: 3.6.4 (3.6.4)
Code Type: X86-64 (Native)
Parent Process: bash [657]
Responsible: Python [79534]
User ID: 501
Date/Time: 2018-03-02 15:30:27.642 +1300
OS Version: Mac OS X 10.13.3 (17D102)
Report Version: 12
Anonymous UUID: xx
Time Awake Since Boot: 21000 seconds
System Integrity Protection: disabled
Crashed Thread: 0 Dispatch queue: com.apple.main-thread
Exception Type: EXC_BAD_INSTRUCTION (SIGILL)
Exception Codes: 0x0000000000000001, 0x0000000000000000
Exception Note: EXC_CORPSE_NOTIFY
Termination Signal: Illegal instruction: 4
Termination Reason: Namespace SIGNAL, Code 0x4
Terminating Process: exc handler [0]
Thread 0 Crashed:: Dispatch queue: com.apple.main-thread
0 libpq.5.10.dylib 0x00000001118e8d27 initPQExpBuffer + 32
1 libpq.5.10.dylib 0x00000001118dba93 PQconninfoParse + 43
2 _psycopg.cpython-36m-darwin.so 0x0000000111897cf1 psyco_parse_dsn + 113
3 org.python.python 0x000000010fd4681a _PyCFunction_FastCallDict + 463
4 org.python.python 0x000000010fdaad8e call_function + 489
5 org.python.python 0x000000010fda3c43 _PyEval_EvalFrameDefault + 4811
6 org.python.python 0x000000010fdab4f0 _PyEval_EvalCodeWithName + 1719
7 org.python.python 0x000000010fda293d PyEval_EvalCodeEx + 57
8 org.python.python 0x000000010fd2ec76 function_call + 339
9 org.python.python 0x000000010fd0e9f2 PyObject_Call + 101
10 org.python.python 0x000000010fda3eac _PyEval_EvalFrameDefault + 5428
11 org.python.python 0x000000010fdab4f0 _PyEval_EvalCodeWithName + 1719
12 org.python.python 0x000000010fda293d PyEval_EvalCodeEx + 57
13 org.python.python 0x000000010fd2ec76 function_call + 339
14 org.python.python 0x000000010fd0e9f2 PyObject_Call + 101
15 org.python.python 0x000000010fda3eac _PyEval_EvalFrameDefault + 5428
16 org.python.python 0x000000010fdabe93 _PyFunction_FastCall + 121
17 org.python.python 0x000000010fdaad65 call_function + 448
18 org.python.python 0x000000010fda3c43 _PyEval_EvalFrameDefault + 4811
19 org.python.python 0x000000010fdabe93 _PyFunction_FastCall + 121
20 org.python.python 0x000000010fd0eb71 _PyObject_FastCallDict + 196
21 org.python.python 0x000000010fd0ec94 _PyObject_Call_Prepend + 156
22 org.python.python 0x000000010fd0e9f2 PyObject_Call + 101
23 org.python.python 0x000000010fd598ae slot_tp_init + 57
24 org.python.python 0x000000010fd5683c type_call + 184
25 org.python.python 0x000000010fd0eb3c _PyObject_FastCallDict + 143
26 org.python.python 0x000000010fdaad5e call_function + 441
27 org.python.python 0x000000010fda3c43 _PyEval_EvalFrameDefault + 4811
28 org.python.python 0x000000010fdabe93 _PyFunction_FastCall + 121
29 org.python.python 0x000000010fd0eb71 _PyObject_FastCallDict + 196
30 org.python.python 0x000000010fd0ec94 _PyObject_Call_Prepend + 156
31 org.python.python 0x000000010fd0e9f2 PyObject_Call + 101
32 org.python.python 0x000000010fd598ae slot_tp_init + 57
33 org.python.python 0x000000010fd5683c type_call + 184
34 org.python.python 0x000000010fd0eb3c _PyObject_FastCallDict + 143
35 org.python.python 0x000000010fdaad5e call_function + 441
36 org.python.python 0x000000010fda3c43 _PyEval_EvalFrameDefault + 4811
37 org.python.python 0x000000010fdab4f0 _PyEval_EvalCodeWithName + 1719
38 org.python.python 0x000000010fda28fe PyEval_EvalCode + 42
39 org.python.python 0x000000010fdcb24e run_mod + 54
40 org.python.python 0x000000010fdca26f PyRun_FileExFlags + 160
41 org.python.python 0x000000010fdc994c PyRun_SimpleFileExFlags + 285
42 org.python.python 0x000000010fddd770 Py_Main + 3484
43 org.python.python 0x000000010fd01e1d 0x10fd00000 + 7709
44 libdyld.dylib 0x00007fff6c260115 start + 1
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x00007f86c3db9200 rbx: 0x00007ffedfefe3a0 rcx: 0x0000000000000100 rdx: 0x0000000000010000
rdi: 0x0000000000000b93 rsi: 0x00000000ffff0001 rbp: 0x00007ffedfefe390 rsp: 0x00007ffedfefe380
r8: 0x000000006c3db930 r9: 0x000000000000000f r10: 0x00000000ffff0000 r11: 0x00007f86c3d00000
r12: 0x0000000110665738 r13: 0x0000000111c68510 r14: 0x0000000111cb80b0 r15: 0x00007ffedfefe3a0
rip: 0x00000001118e8d27 rfl: 0x0000000000010206 cr2: 0x00000001118ef90e
Logical CPU: 2
Error Code: 0x00000000
Trap Number: 6
What I have tried so far:
Upgraded Python to 3.6.4 from 3.5.1
Rebuilt all dependent libraries including psycopg2 to make sure they are High Sierra compatible (I hope)
Reinstalled Postgres from scratch
Upgraded Xcode + tools
So I'm at a bit of a loss as to what to try next? Has anyone else run into this? Any pointers to where to look? Anything that helps me get this working would be greatly appreciated thanks!

So it looked like the psycopg2 library was the culprit and this fixed it for me:
$pip3 uninstall psycopg2
...
Successfully uninstalled psycopg2-binary-2.7.4
$pip3 install psycopg2-binary --no-binary :all:
Collecting psycopg2-binary
Downloading psycopg2-binary-2.7.4.tar.gz (426kB)
100% |---| 430kB 649kB/s
Skipping bdist_wheel for psycopg2-binary, due to binaries being disabled for it.
Installing collected packages: psycopg2-binary
Running setup.py install for psycopg2-binary ... done
Successfully installed psycopg2-binary-2.7.4
$python3 test.py
Connecting to the PostgreSQL database...
All good.
Database connection closed.
The reason I believe is something to do with the fact I was trying to build psycopg2 on a 2010 era MBP specifically and it has a compatibility issue with the hardware - probably the 2.66 GHz Intel Core i7 processor this machine has.
Thank you #Laurenz Albe and #joop for quick replies, pointers and insights, you helped narrow me down to this answer which I hope will stay stable for the duration of this job ;) Cheers!

According to the stack trace, that error occurs in the PostgreSQL client, in this harmless piece of code:
/*
* initPQExpBuffer
*
* Initialize a PQExpBufferData struct (with previously undefined contents)
* to describe an empty string.
*/
void
initPQExpBuffer(PQExpBuffer str)
{
str->data = (char *) malloc(INITIAL_EXPBUFFER_SIZE);
if (str->data == NULL)
{
str->data = (char *) oom_buffer; /* see comment above */
str->maxlen = 0;
str->len = 0;
}
else
{
str->maxlen = INITIAL_EXPBUFFER_SIZE;
str->len = 0;
str->data[0] = '\0';
}
}
I found this and this question dealing with similar problems.
Illegal instruction should mean that execution encountered an instruction code that does not exist, which is either a compiler bug or means that the code was built for a processor with a different instruction set.
The problem is likely somewhere in the procedure with which PostgreSQL was built. You should bring this complaint to the packagers who built the binaries you are using.

osx 10.10.5 Python 2.7 "Fatal Python error: PyThreadState_Get: no current thread Abort trap: 6" error

I am using homebrew python 2.7 and I installed nupic
$ pip install nupic
Then I get error when i try to import nupic
$ python
Python 2.7.11 (default, Jan 22 2016, 08:28:37)
[GCC 4.2.1 Compatible Apple LLVM 7.0.2 (clang-700.1.81)] on darwin
Type "help", "copyright", "credits" or "license" for more information.
>>> from nupic.bindings.algorithms import SpatialPooler as SP
Fatal Python error: PyThreadState_Get: no current thread
Abort trap: 6
$
After I get the error:
Fatal Python error: PyThreadState_Get: no current thread
Abort trap: 6
Python exits and it asks if i want to report it to apple.
Here is the report.
Process: Python [72449]
Path: /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/Resources/Python.app/Contents/MacOS/Python
Identifier: Python
Version: 2.7.11 (2.7.11)
Code Type: X86-64 (Native)
Parent Process: bash [93469]
Responsible: Terminal [93466]
User ID: 501
Date/Time: 2016-02-06 17:30:50.442 +0900
OS Version: Mac OS X 10.10.5 (14F1021)
Report Version: 11
Anonymous UUID: 855D5299-1DD9-879D-F358-9483D5CA0033
Sleep/Wake UUID: A2948A3A-B3AB-4F3C-8214-250AAC8AB13F
Time Awake Since Boot: 75000 seconds
Time Since Wake: 7800 seconds
Crashed Thread: 0 Dispatch queue: com.apple.main-thread
Exception Type: EXC_CRASH (SIGABRT)
Exception Codes: 0x0000000000000000, 0x0000000000000000
Application Specific Information:
abort() called
Thread 0 Crashed:: Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff85532286 __pthread_kill + 10
1 libsystem_c.dylib 0x00007fff932e79b3 abort + 129
2 org.python.python 0x000000010a8fa2a3 Py_FatalError + 49
3 org.python.python 0x000000010a8f9785 PyThreadState_Get + 28
4 org.python.python 0x000000010a8f6522 Py_InitModule4_64 + 62
5 _algorithms.so 0x000000010a0d7c7c init_algorithms + 796
6 org.python.python 0x0000000108fdb98b _PyImport_LoadDynamicModule + 140
7 org.python.python 0x0000000108fdb422 imp_load_module + 243
8 org.python.python 0x0000000108fc5be5 PyEval_EvalFrameEx + 26858
9 org.python.python 0x0000000108fc9745 fast_function + 264
10 org.python.python 0x0000000108fc5b0b PyEval_EvalFrameEx + 26640
11 org.python.python 0x0000000108fbf109 PyEval_EvalCodeEx + 1583
12 org.python.python 0x0000000108fbead4 PyEval_EvalCode + 54
13 org.python.python 0x0000000108fd7f0f PyImport_ExecCodeModuleEx + 241
14 org.python.python 0x0000000108fdac27 load_source_module + 1089
15 org.python.python 0x0000000108fda689 import_submodule + 267
16 org.python.python 0x0000000108fda24f load_next + 284
17 org.python.python 0x0000000108fd946b PyImport_ImportModuleLevel + 1195
18 org.python.python 0x0000000108fba70a builtin___import__ + 135
19 org.python.python 0x0000000108f45ef0 PyObject_Call + 99
20 org.python.python 0x0000000108fc9087 PyEval_CallObjectWithKeywords + 165
21 org.python.python 0x0000000108fc438a PyEval_EvalFrameEx + 20623
22 org.python.python 0x0000000108fbf109 PyEval_EvalCodeEx + 1583
23 org.python.python 0x0000000108fbead4 PyEval_EvalCode + 54
24 org.python.python 0x0000000108fe2eb9 run_mod + 53
25 org.python.python 0x0000000108fe2f5c PyRun_FileExFlags + 133
26 org.python.python 0x0000000108fe2aab PyRun_SimpleFileExFlags + 698
27 org.python.python 0x0000000108ff445d Py_Main + 3137
28 libdyld.dylib 0x00007fff9331a5c9 start + 1
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x0000000000000006 rcx: 0x00007fff56ccd9f8 rdx: 0x0000000000000000
rdi: 0x0000000000000713 rsi: 0x0000000000000006 rbp: 0x00007fff56ccda20 rsp: 0x00007fff56ccd9f8
r8: 0x00007fff56ccda10 r9: 0x00007fff75557300 r10: 0x0000000008000000 r11: 0x0000000000000206
r12: 0x0000000109d92e94 r13: 0x000000010a4a9010 r14: 0x00007fff75557300 r15: 0x000000010906c310
rip: 0x00007fff85532286 rfl: 0x0000000000000206 cr2: 0x00007fff75ea9fd8
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Binary Images:
0x108f31000 - 0x108f32fff +org.python.python (2.7.11 - 2.7.11) <798BC1F6-00F9-31F0-81E0-2B45D55E8D9B> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/Resources/Python.app/Contents/MacOS/Python
0x108f3b000 - 0x109031ff7 +org.python.python (2.7.11, [c] 2001-2015 Python Software Foundation. - 2.7.11) <006A4B30-6420-3484-A665-DA24EC4C7EC0> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/Python
0x10924f000 - 0x109251fff +_locale.so (0) <20687CD8-F52A-3BAD-88FB-9BE03FEFC81C> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_locale.so
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0x1092dc000 - 0x109433fff +multiarray.so (???) <5B71DE58-9764-3D6B-A574-757C96F5F7F7> /usr/local/lib/python2.7/site-packages/numpy/core/multiarray.so
0x1094ed000 - 0x1094f6ff7 +datetime.so (0) <C56B55F8-7D34-3234-88BA-AF4C61C763B3> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/datetime.so
0x1094ff000 - 0x10955eff7 +umath.so (???) <73DFD541-C165-3D3E-BBD1-C90CFB6E3D3D> /usr/local/lib/python2.7/site-packages/numpy/core/umath.so
0x1095cb000 - 0x1095cefff +_collections.so (0) <CD07A4D1-4505-353A-8D97-466AF00273AC> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_collections.so
0x1095d3000 - 0x1095d6fff +operator.so (0) <7AFEBDE5-555B-326F-B651-76D5E736B62C> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/operator.so
0x1095dc000 - 0x1095e1fff +itertools.so (0) <828A4F03-17C4-3640-AE55-740BFC4409CF> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/itertools.so
0x1095ea000 - 0x1095ebfff +_heapq.so (0) <1AEE9933-BC4F-3E4E-8AB5-4D9BBB76636A> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_heapq.so
0x1095ef000 - 0x1095fafff +cPickle.so (0) <7085F368-7F9B-311E-AC2B-2ECF506FE4FA> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/cPickle.so
0x109640000 - 0x109641fff +cStringIO.so (0) <106617DC-C0B4-367F-AE02-790002237B0A> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/cStringIO.so
0x109646000 - 0x10964bff7 +_dotblas.so (???) <809BDF78-123C-38FC-863D-9D82F05D21A9> /usr/local/lib/python2.7/site-packages/numpy/core/_dotblas.so
0x10964f000 - 0x109650fff +_functools.so (0) <9F51DD89-251B-32CB-B020-FC70B28C090B> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_functools.so
0x109653000 - 0x10967aff7 +scalarmath.so (???) <C15C5850-42F0-3586-B8F6-A666A343561F> /usr/local/lib/python2.7/site-packages/numpy/core/scalarmath.so
0x1097cc000 - 0x1097ceff7 +time.so (0) <6EC635F4-E9F9-3DF4-8F22-313F7D892629> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/time.so
0x109813000 - 0x109814fff +grp.so (0) <2DF43676-F9A0-3C6A-8EF2-8E19A6416BF8> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/grp.so
0x109817000 - 0x109826fff +_io.so (0) <5614CD2E-13DF-30CC-A724-4D7D8E37F9B5> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_io.so
0x109838000 - 0x10983bfff +binascii.so (0) <A61ACC22-2A70-39A5-B30D-0436E6A38AAF> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/binascii.so
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0x109844000 - 0x109882fff +libssl.1.0.0.dylib (0) <733D4350-77AD-3504-ABFC-E1C41261B9D2> /usr/local/opt/openssl/lib/libssl.1.0.0.dylib
0x10989e000 - 0x109a0d8df +libcrypto.1.0.0.dylib (0) <87599B7D-0474-3047-8362-3279DAB41455> /usr/local/opt/openssl/lib/libcrypto.1.0.0.dylib
0x109a85000 - 0x109a86fff +_random.so (0) <09D7F46C-1C20-34AD-A904-5973542C197A> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_random.so
0x109a89000 - 0x109a8afff +fcntl.so (0) <0B4E0194-4046-32FB-B2E9-726CBE47D07E> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/fcntl.so
0x109acd000 - 0x109ad1ff7 +_compiled_base.so (???) <5D442C0C-6B62-3A70-968E-2670052500AB> /usr/local/lib/python2.7/site-packages/numpy/lib/_compiled_base.so
0x109b15000 - 0x109b17fff +lapack_lite.so (???) <6C3A7FF9-1A79-3146-B70C-E69A67999400> /usr/local/lib/python2.7/site-packages/numpy/linalg/lapack_lite.so
0x109b1b000 - 0x109b30fff +_umath_linalg.so (???) <E242EBAE-3418-38E6-896F-CCD1C52F22BF> /usr/local/lib/python2.7/site-packages/numpy/linalg/_umath_linalg.so
0x109b3c000 - 0x109b3cfff +future_builtins.so (0) <D6C14BF6-23BB-3C57-A53D-5BE766837860> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/future_builtins.so
0x109b7f000 - 0x109b87fff +fftpack_lite.so (???) <2F049C9E-E682-30A2-B732-FC7A036D13AF> /usr/local/lib/python2.7/site-packages/numpy/fft/fftpack_lite.so
0x109bcb000 - 0x109c3bff7 +mtrand.so (???) <DE2327A6-D66E-3B85-A7D1-DD5F868D2ED6> /usr/local/lib/python2.7/site-packages/numpy/random/mtrand.so
0x109ccf000 - 0x109cdefff +_ctypes.so (0) <D6A61F6C-676E-3B72-B8DF-8C7B3C094E0C> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_ctypes.so
0x109ce9000 - 0x109cecfff +_struct.so (0) <6AA070ED-02B7-3DE3-9851-0FA49DB24FA9> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_struct.so
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0x109def000 - 0x109df2fff +zlib.so (0) <FCB3E46D-4B9C-3A51-8F99-A2720E72AD75> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/zlib.so
0x109e36000 - 0x109e3efff +_socket.so (0) <1D54A3B9-A146-3B52-A2EC-A531CB2815B1> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_socket.so
0x109e48000 - 0x109e52fff +_ssl.so (0) <67DA7263-C866-3DFF-836E-659C527E0494> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_ssl.so
0x109edc000 - 0x109eddfff +_scproxy.so (0) <3E573FA0-10A0-3614-AD54-07320FFC3452> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/_scproxy.so
0x109f60000 - 0x109f68fff +parser.so (0) <1EA858FF-78CC-3A56-B732-E870DF04287E> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/parser.so
0x109fac000 - 0x109fcafff +pyexpat.so (0) <A2CE4072-E964-3DBD-AB26-E989C7395BA6> /usr/local/Cellar/python/2.7.11/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/pyexpat.so
0x10a0d5000 - 0x10a51ffff +_algorithms.so (0) <B32F93B6-B3D0-3EEC-A802-D6376794C564> /usr/local/lib/python2.7/site-packages/nupic/bindings/_algorithms.so
0x10a857000 - 0x10a949fff org.python.python (2.7.10 - 2.7.10) <E4356925-959C-36B1-9991-1D925E7B6C94> /System/Library/Frameworks/Python.framework/Versions/2.7/Python
0x7fff68d9b000 - 0x7fff68dd1887 dyld (353.2.3) <B1B370A5-479F-3533-8AD7-97B687D4F989> /usr/lib/dyld
0x7fff83936000 - 0x7fff83947ff7 libz.1.dylib (55) <88C7C7DE-04B8-316F-8B74-ACD9F3DE1AA1> /usr/lib/libz.1.dylib
0x7fff83eab000 - 0x7fff83eabff7 liblaunch.dylib (559.40.1) <4F81CA3A-D2CE-3030-A89D-42F3DAD7BA8F> /usr/lib/system/liblaunch.dylib
0x7fff83eac000 - 0x7fff83eb4ffb libcopyfile.dylib (118.1.2) <0C68D3A6-ACDD-3EF3-991A-CC82C32AB836> /usr/lib/system/libcopyfile.dylib
0x7fff84d34000 - 0x7fff84d35ff3 libSystem.B.dylib (1213) <1866C519-C5F3-3D09-8C17-A8F703664521> /usr/lib/libSystem.B.dylib
0x7fff84ec9000 - 0x7fff84f0fff7 libauto.dylib (186) <A260789B-D4D8-316A-9490-254767B8A5F1> /usr/lib/libauto.dylib
0x7fff8551c000 - 0x7fff85539fff libsystem_kernel.dylib (2782.50.1) <1EE815DA-FF1B-3A53-AE9B-C98BD8177A9D> /usr/lib/system/libsystem_kernel.dylib
0x7fff8555f000 - 0x7fff85561fff libsystem_configuration.dylib (699.40.2) <56F94DCE-DBDE-3615-8F07-DE6270D9F8BE> /usr/lib/system/libsystem_configuration.dylib
0x7fff85597000 - 0x7fff8559bfff libcache.dylib (69) <45E9A2E7-99C4-36B2-BEE3-0C4E11614AD1> /usr/lib/system/libcache.dylib
0x7fff856fc000 - 0x7fff856fdff7 libsystem_blocks.dylib (65) <9615D10A-FCA7-3BE4-AA1A-1B195DACE1A1> /usr/lib/system/libsystem_blocks.dylib
0x7fff85b55000 - 0x7fff85b71ff7 libsystem_malloc.dylib (53.30.1) <DDA8928B-CC0D-3255-BD8A-3FEA0982B890> /usr/lib/system/libsystem_malloc.dylib
0x7fff85bf7000 - 0x7fff85f12fcf com.apple.vImage (8.0 - 8.0) <1183FE6A-FDB6-3B3B-928D-50C7909F2308> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vImage.framework/Versions/A/vImage
0x7fff85f2c000 - 0x7fff85f3dff3 libsystem_coretls.dylib (35.40.1) <155DA0A9-2046-332E-BFA3-D7974A51F731> /usr/lib/system/libsystem_coretls.dylib
0x7fff869cb000 - 0x7fff86b59fff libBLAS.dylib (1128) <497912C1-A98E-3281-BED7-E9C751552F61> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
0x7fff86e00000 - 0x7fff86e00ff7 libunc.dylib (29) <5676F7EA-C1DF-329F-B006-D2C3022B7D70> /usr/lib/system/libunc.dylib
0x7fff8798d000 - 0x7fff8799dff7 libbsm.0.dylib (34) <A3A2E56C-2B65-37C7-B43A-A1F926E1A0BB> /usr/lib/libbsm.0.dylib
0x7fff87b8e000 - 0x7fff87bbefff libsystem_m.dylib (3086.1) <1E12AB45-6D96-36D0-A226-F24D9FB0D9D6> /usr/lib/system/libsystem_m.dylib
0x7fff87be9000 - 0x7fff87bebff7 libsystem_coreservices.dylib (9) <41B7C578-5A53-31C8-A96F-C73E030B0938> /usr/lib/system/libsystem_coreservices.dylib
0x7fff87bec000 - 0x7fff87beefff libquarantine.dylib (76.20.1) <7AF90041-2768-378A-925A-D83161863642> /usr/lib/system/libquarantine.dylib
0x7fff88c2f000 - 0x7fff88ca7ff7 com.apple.SystemConfiguration (1.14.4 - 1.14) <3DFFD7F7-BD23-3F4C-A209-C4A0D99F6573> /System/Library/Frameworks/SystemConfiguration.framework/Versions/A/SystemConfiguration
0x7fff899a0000 - 0x7fff899f4fff libc++.1.dylib (120) <1B9530FD-989B-3174-BB1C-BDC159501710> /usr/lib/libc++.1.dylib
0x7fff89a03000 - 0x7fff89a03ff7 libkeymgr.dylib (28) <77845842-DE70-3CC5-BD01-C3D14227CED5> /usr/lib/system/libkeymgr.dylib
0x7fff8a39f000 - 0x7fff8a3a0ffb libremovefile.dylib (35) <3485B5F4-6CE8-3C62-8DFD-8736ED6E8531> /usr/lib/system/libremovefile.dylib
0x7fff8a3a1000 - 0x7fff8a3b8ff7 libLinearAlgebra.dylib (1128) <E78CCBAA-A999-3B65-8EC9-06DB15E67C37> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLinearAlgebra.dylib
0x7fff8a3b9000 - 0x7fff8a3e1fff libsystem_info.dylib (459.40.1) <2E16C4B3-A327-3957-9C41-143911979A1E> /usr/lib/system/libsystem_info.dylib
0x7fff8a5b8000 - 0x7fff8a5bdfff libsystem_stats.dylib (163.30.2) <D0E96837-3CF6-323D-B711-6DF6F660E530> /usr/lib/system/libsystem_stats.dylib
0x7fff8ad36000 - 0x7fff8ad3efff libsystem_platform.dylib (63) <64E34079-D712-3D66-9CE2-418624A5C040> /usr/lib/system/libsystem_platform.dylib
0x7fff8ad93000 - 0x7fff8b1a0ff7 libLAPACK.dylib (1128) <F9201AE7-B031-36DB-BCF8-971E994EF7C1> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib
0x7fff8b327000 - 0x7fff8b32eff7 libcompiler_rt.dylib (35) <BF8FC133-EE10-3DA6-9B90-92039E28678F> /usr/lib/system/libcompiler_rt.dylib
0x7fff8bda2000 - 0x7fff8bdb8ff7 libsystem_asl.dylib (267) <F153AC5B-0542-356E-88C8-20A62CA704E2> /usr/lib/system/libsystem_asl.dylib
0x7fff8bdf2000 - 0x7fff8bdf4fff libsystem_sandbox.dylib (358.20.5) <3F5E973F-C702-31AC-97BC-05F5C195683C> /usr/lib/system/libsystem_sandbox.dylib
0x7fff8c836000 - 0x7fff8ca3046f libobjc.A.dylib (647) <759E155D-BC42-3D4E-869B-6F57D477177C> /usr/lib/libobjc.A.dylib
0x7fff8cb22000 - 0x7fff8cb5afff libsystem_network.dylib (412.20.3) <6105C134-6722-3C0A-A4CE-5E1261E2E1CC> /usr/lib/system/libsystem_network.dylib
0x7fff8cbcb000 - 0x7fff8cbccfff libsystem_secinit.dylib (18) <581DAD0F-6B63-3A48-B63B-917AF799ABAA> /usr/lib/system/libsystem_secinit.dylib
0x7fff8cbcd000 - 0x7fff8cbd6ff7 libsystem_notify.dylib (133.1.1) <61147800-F320-3DAA-850C-BADF33855F29> /usr/lib/system/libsystem_notify.dylib
0x7fff8ccbc000 - 0x7fff8ccbcfff com.apple.Accelerate.vecLib (3.10 - vecLib 3.10) <9D749502-A228-3BF1-B52F-A182DEEB2C4D> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/vecLib
0x7fff8d03e000 - 0x7fff8d044fff libsystem_trace.dylib (72.20.1) <840F5301-B55A-3078-90B9-FEFFD6CD741A> /usr/lib/system/libsystem_trace.dylib
0x7fff8dd5f000 - 0x7fff8dd65ff7 libsystem_networkextension.dylib (167.40.3) <BA58B30B-8377-3B0A-8AE3-4F84021D9D4E> /usr/lib/system/libsystem_networkextension.dylib
0x7fff8dd66000 - 0x7fff8dd90ff7 libdispatch.dylib (442.50.1) <A61E703C-784A-3698-B513-75DD12AAD6DC> /usr/lib/system/libdispatch.dylib
0x7fff8e065000 - 0x7fff8e06aff7 libmacho.dylib (862) <126CA2ED-DE91-308F-8881-B9DAEC3C63B6> /usr/lib/system/libmacho.dylib
0x7fff8ef0d000 - 0x7fff8ef0dfff com.apple.Accelerate (1.10 - Accelerate 1.10) <2C8AF258-4F11-3BEC-A826-22D7199B3975> /System/Library/Frameworks/Accelerate.framework/Versions/A/Accelerate
0x7fff8ef4c000 - 0x7fff8ef55fff libsystem_pthread.dylib (105.40.1) <ACE90967-ECD0-3251-AEEB-461E3C6414F7> /usr/lib/system/libsystem_pthread.dylib
0x7fff8f9c2000 - 0x7fff8f9c3fff libDiagnosticMessagesClient.dylib (100) <2EE8E436-5CDC-34C5-9959-5BA218D507FB> /usr/lib/libDiagnosticMessagesClient.dylib
0x7fff9028b000 - 0x7fff9039dff7 libvDSP.dylib (516) <151B3CCB-77D3-3715-A3D0-7C74CD5C7FFC> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libvDSP.dylib
0x7fff914ff000 - 0x7fff91504ff7 libunwind.dylib (35.3) <BE7E51A0-B6EA-3A54-9CCA-9D88F683A6D6> /usr/lib/system/libunwind.dylib
0x7fff917f1000 - 0x7fff9186afe7 libcorecrypto.dylib (233.30.1) <5779FFA0-4D9A-3AD4-B7F2-618227621DC8> /usr/lib/system/libcorecrypto.dylib
0x7fff91adc000 - 0x7fff91ae4fff libsystem_dnssd.dylib (576.50.2) <9EC5AF92-D0D2-3BDE-92B6-D3730D3865C8> /usr/lib/system/libsystem_dnssd.dylib
0x7fff91eaf000 - 0x7fff91f5efe7 libvMisc.dylib (516) <6739E390-46E7-3BFA-9B69-B278562326E6> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libvMisc.dylib
0x7fff91f5f000 - 0x7fff922f7ff7 com.apple.CoreFoundation (6.9 - 1153.18) <5C0892B8-9691-341F-9279-CA3A74D59AA0> /System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation
0x7fff922fc000 - 0x7fff924e1ff7 libicucore.A.dylib (531.50) <CAA7ACE0-4012-3A13-864D-2B56B4B072FD> /usr/lib/libicucore.A.dylib
0x7fff92a54000 - 0x7fff92a7cfff libxpc.dylib (559.40.1) <5C829202-962E-3744-8B50-00D38CC88E84> /usr/lib/system/libxpc.dylib
0x7fff92acd000 - 0x7fff92af8fff libc++abi.dylib (125) <88A22A0F-87C6-3002-BFBA-AC0F2808B8B9> /usr/lib/libc++abi.dylib
0x7fff92c13000 - 0x7fff92c1efff libcommonCrypto.dylib (60061.30.1) <E789748D-F9A7-3CFF-B317-90DF348B1E95> /usr/lib/system/libcommonCrypto.dylib
0x7fff9328a000 - 0x7fff93316fe7 libsystem_c.dylib (1044.40.1) <F0635E0F-FE4B-34DB-ACF9-A58C1E9070E9> /usr/lib/system/libsystem_c.dylib
0x7fff93317000 - 0x7fff9331aff7 libdyld.dylib (353.2.3) <CFBBE540-D503-3AFC-B5D6-644F1E69949B> /usr/lib/system/libdyld.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 73166
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=109.5M resident=95.1M(87%) swapped_out_or_unallocated=14.4M(13%)
Writable regions: Total=53.9M written=13.3M(25%) resident=15.8M(29%) swapped_out=0K(0%) unallocated=38.1M(71%)
REGION TYPE VIRTUAL
=========== =======
Kernel Alloc Once 4K
MALLOC 44.8M
MALLOC (admin) 16K
STACK GUARD 56.0M
Stack 8192K
VM_ALLOCATE 16K
__DATA 2940K
__LINKEDIT 75.9M
__TEXT 33.6M
__UNICODE 552K
shared memory 4K
=========== =======
TOTAL 221.8M
Model: MacBookPro12,1, BootROM MBP121.0167.B14, 2 processors, Intel Core i5, 2.7 GHz, 8 GB, SMC 2.28f7
Graphics: Intel Iris Graphics 6100, Intel Iris Graphics 6100, Built-In
Memory Module: BANK 0/DIMM0, 4 GB, DDR3, 1867 MHz, 0x80AD, 0x483943434E4E4E424C54414C41522D4E5544
Memory Module: BANK 1/DIMM0, 4 GB, DDR3, 1867 MHz, 0x80AD, 0x483943434E4E4E424C54414C41522D4E5544
AirPort: spairport_wireless_card_type_airport_extreme (0x14E4, 0x133), Broadcom BCM43xx 1.0 (7.15.166.24.3)
Bluetooth: Version 4.3.6f3 16238, 3 services, 27 devices, 1 incoming serial ports
Network Service: Wi-Fi, AirPort, en0
Serial ATA Device: APPLE SSD SM0256G, 251 GB
USB Device: Internal Memory Card Reader
USB Device: Bluetooth USB Host Controller
Thunderbolt Bus: MacBook Pro, Apple Inc., 27.1
The problem does not happen if I run the native python installed on my mac. The following works just fine.
$ /usr/bin/python
Python 2.7.10 (default, Jul 14 2015, 19:46:27)
[GCC 4.2.1 Compatible Apple LLVM 6.0 (clang-600.0.39)] on darwin
Type "help", "copyright", "credits" or "license" for more information.
>>> from nupic.bindings.algorithms import SpatialPooler as SP
>>>
Any help would be greatly appreciated.