How to make a progressive line graph with each timestep? - python

import matplotlib.pyplot as plt
from matplotlib.patches import Rectangle
import numpy as np
import random
MAXROWS = 20
MAXCOLS = 20
def flipCoords(row, col, limits):
xpos = col
ypos = row
return (xpos, ypos)
def plot_runner_scatter(runners, limits):
xlist = []
ylist = []
slist = []
clist = []
mlist = []
for k in range(len(runners)):
ylist.append(runners[k].getRow())
xlist.append(runners[k].getCol())
slist.append(80)
clist.append(k)
plt.scatter(xlist,ylist,s=slist,c=clist,marker=6,edgecolors='white')
def main():
runnerNames = ["1","2","3","4","5"]
limits = [MAXROWS, MAXCOLS]
light = True
numRunners = 5
runnerList = []
for j in range(numRunners):
runnerList.append(Runner(limits, runnerNames[j]))
runnerList[j].row = 0
runnerList[j].col = (MAXCOLS/numRunners)/2 + j*(MAXCOLS/numRunners)
for t in range(5):
ax = plt.axes()
print("### Timestep ", t, "###")
for i in range(8):
xlist = [2,7,12,17,4,10,16,10]
ylist = [2,2,2,2,9,9,9,15]
rect1width = 2
rect1height = 2
rect = Rectangle((xlist[i],ylist[i]), rect1width, rect1height)
rect.set_color('k')
rect.zorder = 0
ax.add_patch(rect)
if light:
plt.title("RUN! at timestep "+ str(t) +" first one wins")
ax.set_facecolor("orange")
else:
plt.title("Beware! lights are off at timestep "+ str(t) +" watch your step")
ax.set_facecolor("gray")
for i in range(numRunners):
if light and not runnerList[i].felloff:
runnerList[i].run()
for j in range(8):
if runnerList[i].row == (ylist[j]+1) and ((xlist[j]) < runnerList[i].col < (xlist[j] + rect1width)):
runnerList[i].row -= 1
runnerList[i].col += 1
print(runnerList[i].name, "survives at row", runnerList[i].row, "and col", runnerList[i].col)
elif not light and not runnerList[i].felloff:
runnerList[i].blinded()
for j in range(8):
if runnerList[i].row == (ylist[j]+1) and ((xlist[j]) < runnerList[i].col < (xlist[j] + rect1width)):
runnerList[i].felloff = True
runnerList[i].getFallen()
if runnerList[i].row < 0 or runnerList[i].col < 0 or runnerList[i].col > MAXCOLS:
runnerList[i].felloff = True
runnerList[i].getFallen()
if not runnerList[i].felloff:
print(runnerList[i].name, "survives at row", runnerList[i].row, "and col", runnerList[i].col)
else:
print(runnerList[i].name, "fell off the platform at row", runnerList[i].row, "and col", runnerList[i].col)
if random.randint(1,4) == 1:
light = not light
for i in range(numRunners):
plot_runner_scatter(runnerList, limits)
plt.xlabel("Columns")
plt.ylabel("Rows")
for i in range(numRunners):
plt.annotate(runnerList[i].name, flipCoords(runnerList[i].getRow(), runnerList[i].getCol(), limits), color = "white")
plt.xlim(-1,MAXCOLS)
plt.ylim(-1,MAXROWS)
plt.pause(1)
plt.clf()
for i in range(numRunners):
if runnerList[i].row == 20:
print("Runner", runnerList[i].name, "WINS THE RACE!")
break
if __name__ == "__main__":
main()
This is a simulation where there are runners in a platform and they have to race to the end. I want to have a line graph with 4 lines where on the y axis is the row of each runner and x axis is the time. So as the simulation goes on the row of each runner is updated with time. How can I achieve this?

Related

plt.matshow().set_data() is not updating the AxesImage

Here's a program that I am trying to run for Potts Model. It gives the plot once and then keeps repeating the line <Figure size 432x288 with 0 Axes>. What's the solution to get various plots after certain time steps showing the evolution of the system?
import math
import numpy as np
import matplotlib.pyplot as plt
def largest_primes_under(N):
n = N - 1
while n >= 2:
if all(n % d for d in range(2, int(n ** 0.5 + 1))):
return n
n -= 1
def Neighbors(Lattice,i,j,n=1):
''' Returns an flat array of all neighboring sites in the n-th coordination sphere including the center'''
N, M = Lattice.shape
rows = [(i-1) % N, i, (i+1) % N]
cols = [(j-1) % N, j, (j+1) % M]
return Lattice[rows][:, cols].flatten()
def calc_dE(Lattice, x, y, z):
N, M = Lattice.shape
old_energy = 0
new_energy = 0
for i in [0,1,-1]:
for j in [0,1,-1]:
if i == 0 and j == 0:
continue
if Lattice[x%N,y%M] == Lattice[(x+i)%N,(y+j)%M]:
old_energy += 1
elif z == Lattice[(x+i)%N,(y+j)%M]:
new_energy += 1
return old_energy-new_energy
N, M = 100,100
orientations = 3
MCS = int(10)
a = largest_primes_under(N*M)
L = np.random.randint(1,orientations+1,size=(N,M))
mat = plt.matshow(L,cmap = plt.get_cmap('plasma', orientations+1), vmin = -0.5, vmax = orientations+0.5, interpolation='kaiser')
plt.axis('off')
for t in range(1,MCS+1):
rand = np.random.random_integers(N*M)
for i in range(0,N**2):
index = (a*i + rand) % (N**2)
x = index % N
y = index // N
n = Neighbors(L,x,y)
if len(n)-1 == 0:
continue
else:
z = np.random.choice(n)
dE = calc_dE(L,x,y,z)
if (dE < 0):
L[x%N,y%N] = z
elif np.random.sample() < math.exp(-dE*2.5):
L[x%N,y%N] = z
mat.set_data(L)
plt.draw()
plt.pause(0.1)
mat.set_data(L) is not updating the data
In the for-loop, replace mat.set_data(L) with:
mat = plt.matshow(L, cmap = plt.get_cmap('plasma', orientations+1), vmin = -0.5, vmax = orientations+0.5, interpolation='kaiser')
The plots successfully showed up when I tested the code with the change.
Also np.random.random_integers(N*M) is deprecated in numpy v1.20.1. In the code below, np.random.randint(N*M) is used, but this change isn't related to the question in the OP.
for t in range(1, MCS+1):
rand = np.random.randint(N*M)
for i in range(0, N**2):
index = (a*i + rand) % (N**2)
x = index % N
y = index // N
n = Neighbors(L, x, y)
if len(n)-1 == 0:
continue
else:
z = np.random.choice(n)
dE = calc_dE(L, x, y, z)
if (dE < 0):
L[x%N, y%N] = z
elif np.random.sample() < math.exp(-dE*2.5):
L[x%N, y%N] = z
mat = plt.matshow(L, cmap = plt.get_cmap('plasma', orientations+1), vmin = -0.5, vmax = orientations+0.5, interpolation='kaiser')
# mat.set_data(L)
plt.draw()
plt.pause(0.1)
Alternative
In this case it might be more interesting to animate the progression
Implemented with Animate quadratic grid changes (matshow)
In the following code, save_count=MCS takes the place of the original outer loop for t in range(1, MCS+1), where t was just a throwaway variable.
import matplotlib.animation as animation
def generate_data():
rand = np.random.randint(N*M)
for i in range(0, N**2):
index = (a*i + rand) % (N**2)
x = index % N
y = index // N
n = Neighbors(L, x, y)
if len(n)-1 == 0:
continue
else:
z = np.random.choice(n)
dE = calc_dE(L, x, y, z)
if (dE < 0):
L[x%N, y%N] = z
elif np.random.sample() < math.exp(-dE*2.5):
L[x%N, y%N] = z
return L
def update(data):
mat.set_data(data)
return mat
def data_gen():
while True:
yield generate_data()
N, M = 100, 100
orientations = 3
MCS = 10
a = largest_primes_under(N*M)
L = np.random.randint(1, orientations+1, size=(N, M))
fig, ax = plt.subplots()
mat = ax.matshow(generate_data(), cmap=plt.get_cmap('plasma', orientations+1), vmin=-0.5, vmax=orientations+0.5, interpolation='kaiser')
plt.colorbar(mat)
ani = animation.FuncAnimation(fig, update, data_gen, interval=500, save_count=MCS)
plt.show()
ani.save('animation.gif')

Trying to implement potential field navigation in matplotlib

I am trying to produce an algorithm where multiple agents (blue) work together as a team to capture a slightly faster enemy agent (red) by preforming surrounding and circling tactics in a 2D grid. So I am trying to make a robust multi-agent algorithm that would allow multi-agents would capture an intelligent and faster enemy agent
So I attempted to give the enemy agent navigation and obstacle avoidance abilities by using something known as potential field navigation. Basically, the enemy agent pretends there is an attraction force at the exit and a repulsive force by each blue agent
Click here for more details on potential fields
When I implemented this into the enemy agent, the agent being attracted to the exit is successful (except for the fact it slows down when it is close to it). The main problem I am having is with the repulsion field where the enemy is trying to avoid the blue particles. While it attempts to escape, it does things such as moving in a zig-zag pattern rapidly, run around a blue particle or group or particles in circles.
I would like the enemy agent to smoothly avoid the blue particles in an intelligent way.
Also, is someone knows how to turn repulsive field into a tangential field, that would be great. I would like tangential fields so that the red particle can slip through the blue particles.
Also, although the code is long, the only function that the enemy agent uses is goToExit(), so that function and any function that it calls will be the only ones relevant.
My code:
import numpy as np
from matplotlib import pyplot as plt
from matplotlib import animation
from random import randint
import random
import math
keep = False
keepX = 0
keepY = 0
### Variables that we can play with ###
interestPointVisual = False
huntEnemy = True
numOfAgents = 10
enemyTopSpeed = 0.5
topSpeed = 0.3
secondDoor = False
resultVisual = False
#obstacleAvoidance = False
chargeEnemy = True
maxFrame = 2000
agentRadius = 2
####################################
phaseCount = 0
fig = plt.figure()
fig.set_dpi(100)
fig.set_size_inches(5, 4.5)
# Declaring the enemy and ally agents
ax = plt.axes(xlim=(0, 100), ylim=(0, 100))
enemy = plt.Circle((10, -10), 0.95, fc='r')
agent = plt.Circle((10, -10), 0.95, fc='b')
if interestPointVisual:
interestColor = 'y'
interestSize = 0.55
else:
interestColor = 'w'
interestSize = 0.55
#interestSize = 0.000001
midpoint = plt.Circle((10, -10), interestSize, fc=interestColor)
eastpoint = plt.Circle((10, -10), interestSize, fc=interestColor)
northpoint = plt.Circle((10, -10), interestSize, fc=interestColor)
westpoint = plt.Circle((10, -10), interestSize, fc=interestColor)
northeastpoint = plt.Circle((10, -10), interestSize, fc=interestColor)
mideastpoint = plt.Circle((10, -10), interestSize, fc=interestColor)
midwestpoint = plt.Circle((10, -10), interestSize, fc=interestColor)
northwestpoint = plt.Circle((10, -10), interestSize, fc=interestColor)
# Adding the exits
rect_size = 5
x_se_s = 47
x_se = 50
y_se = 0
southExit = plt.Rectangle([x_se_s - rect_size / 2, y_se - rect_size / 2], rect_size + 3, rect_size -2 , facecolor='black', edgecolor='black')
x_ne = 50
y_ne = 101
if secondDoor:
northExit = plt.Rectangle([x_ne - rect_size / 2, y_ne - rect_size / 2], rect_size + 3, rect_size -2 , facecolor='black', edgecolor='black')
patches_ac = []
if interestPointVisual:
ax.add_patch(midpoint)
ax.add_patch(northpoint)
ax.add_patch(eastpoint)
ax.add_patch(westpoint)
ax.add_patch(mideastpoint)
ax.add_patch(midwestpoint)
ax.add_patch(northeastpoint)
ax.add_patch(northwestpoint)
# enemy, north, east, south, west
# 0 represents unoccupied, 1 represent occupied
global occupied_ar
global victory
global agentID
global timeStep
global agentLocationAR
ax.add_patch(agent)
for x in range(0, numOfAgents - 1):
agent_clone = plt.Circle((10, -10), 0.95, fc='b')
agent_clone.center = (random.randint(1, 100), random.randint(1, 100))
patches_ac.append(agent_clone)
ax.add_patch(agent_clone)
ax.add_patch(enemy)
# Adding exit patches
ax.add_patch(southExit)
if secondDoor:
ax.add_patch(northExit)
def victoryCheck(enemy_patch):
global agentLocationAR
ex, ey = enemy_patch.center
rangeVal = 0.8
for i in range(0, numOfAgents-1):
if abs(float(ex-agentLocationAR[i][0])) < rangeVal and abs(float(ey-agentLocationAR[i][1])) < rangeVal:
return True
return False
def enemyWonCheck(enemy_patch):
x,y = enemy_patch.center
if (x > x_se - 4 and x < x_se + 4) and y <= y_se +4:
return True
return False
def borderCheck(x,y):
if x < 0:
x = 0
elif x > 100:
x = 100
if y < 0:
y = 0
elif y > 100:
y = 100
return x, y
def init():
global occupied_ar
global agentLocationAR
global keep
global keepX
global keepY
keep = False
keepX = 0
keepY = 0
#enemy.center = (50, 50)
enemy.center = (random.randint(1, 100), random.randint(40, 100))
agent.center = (random.randint(1, 100), random.randint(1, 100))
occupied_ar = np.zeros([9])
agentLocationAR = np.zeros((numOfAgents,2))
for ac in patches_ac:
ac.center = (random.randint(1, 100), random.randint(1, 100))
return []
def animationManage(i):
global occupied_ar
global agentLocationAR
global victory
global agentID
global timeStep
global phaseCount
global maxFrame
timeStep = i
agentID = 1
followTarget(i, agent, enemy)
agentLocationAR[agentID-1][0], agentLocationAR[agentID-1][1] = agent.center
for ac in patches_ac:
agentID = agentID + 1
followTarget(i, ac, enemy)
agentLocationAR[agentID-1][0], agentLocationAR[agentID-1][1] = ac.center
goToExit(i, enemy, southExit)
# printing tests
if victoryCheck(enemy):
print 'Phase ', phaseCount
print 'Victory!'
phaseCount += 1
init()
elif enemyWonCheck(enemy):
print 'Phase ', phaseCount
print 'Failure!'
init()
elif i >= maxFrame - 1:
print 'Phase ', phaseCount
phaseCount += 1
return []
def goToExit(i, patch, exit_patch):
global agentLocationAR
global keep
global keepX
global keepY
x, y = patch.center
v_x, v_y = velocity_calc_exit(patch, exit_patch)
mid_x, mid_y, rad_x, rad_y = getMidDistance(patch, exit_patch)
rad_size = math.sqrt(rad_x**2 + rad_y**2)
v_ax, v_ay = attractionFieldExit(patch, x_se, y_se)
v_rx, v_ry = repulsiveFieldEnemy(patch, 5)
v_x = v_ax + v_rx
v_y = v_ay + v_ry
'''
if abs(v_rx) > 1:
v_x = v_x/abs(v_x/10)
if abs(v_ry) > 1:
v_y = v_x/abs(v_x/10)
'''
# Nomalize the magnitude
v_x = v_x*enemyTopSpeed*0.03
v_y = v_y*enemyTopSpeed*0.03
'''
if abs(v_x) > 1 or abs(v_y) > 1:
print '-------------'
print 'Att X: ', v_ax
print 'Att Y: ', v_ay
print 'Rep X: ', v_rx
print 'Rep Y: ', v_ry
print 'Total X: ', v_x
print 'Total Y: ', v_y
'''
# x position
x += v_x*enemyTopSpeed
# y position
y += v_y*enemyTopSpeed
x,y = borderCheck(x,y)
patch.center = (x, y)
return patch,
def dispersalCalc(user_patch):
global agentLocationAR # we need location of agents
for i in range(0,numOfAgents-1):
if(checkSemiRadius(user_patch, agentRadius)):
return True
return False
def attractionFieldExit(user_patch, attr_x, attr_y):
x,y = user_patch.center
netX = (x - attr_x)
netY = (y - attr_y)
# To prevent slow down when enemy is close to exit
if x - attr_x > 20 or y - attr_y > 20:
if x - attr_x > 20:
netX = (x - attr_x)
else:
if x - attr_x == 0:
netX = 0
else:
netX = 5*((x - attr_x)/abs((x - attr_x)))
if y - attr_y > 30:
netY = (y - attr_y)
else:
if y -attr_y == 0:
netY = 0
else:
netY = 50*((y - attr_y)/abs((y - attr_y)))
#print 'something y ', netY
return -netX, -netY
def repulsiveFieldEnemy(user_patch, repulseRadius):
# repulsive field that will be used by the enemy agent
global agentLocationAR
x,y = user_patch.center
totalRepX = 0
totalRepY = 0
scaleConstant = 1**38
for i in range(0, numOfAgents-1):
repX = 0
repY = 0
avoidX = agentLocationAR[i][0]
avoidY = agentLocationAR[i][1]
# To check if one of the agents to avoid are in range
#print getDistanceScalar(x, y, avoidX, avoidY)
if getDistanceScalar(x, y, avoidX, avoidY) <= repulseRadius:
#print 'Enemy agent detected'
netX = int(x - avoidX)
netY = int(y - avoidY)
# To deal with division by zero and normaize magnitude of repX and repY
if netX == 0:
netX = 0.2*((x - avoidX)/abs(x - avoidX))
if netY == 0:
netY = 0.2*((x - avoidX)/abs(x - avoidX))
repX = ((1/abs(netX)) - (1/repulseRadius))*(netX/(abs(netX)**3))
repY = ((1/abs(netY)) - (1/repulseRadius))*(netY/(abs(netY)**3))
totalRepX = totalRepX + repX
totalRepY = totalRepY + repY
totalRepX = totalRepX/scaleConstant
totalRepY = totalRepY/scaleConstant
return -totalRepX, -totalRepY
def followTarget(i, patch, enemy_patch):
x, y = patch.center
# Will try to follow enemy
#v_x, v_y = velocity_calc(patch, enemy_patch)
# Will follow midpoint of enemy & exit
v_x, v_y = velocity_calc_mid(patch, enemy_patch)
#print 'Here:'
#print interest_ar
# x position
x += v_x
# y position
y += v_y
patch.center = (x, y)
return patches_ac
def getInterestPoints(enemy_patch, exit_patch):
# Calculate interest points to attract agents
x, y = enemy_patch.center
# Calculate enemy-to-exit midpoint
mid_x, mid_y, rad_x, rad_y = getMidDistance(enemy_patch, exit_patch)
interest_ar = np.array([[x,y],[0,0],[0,0],[0,0],[0,0],[0,0],[0,0],[0,0],[0,0]])
#north
interest_ar[1][0] = x - rad_x
interest_ar[1][1] = y - rad_y
#east
interest_ar[3][0] = x - rad_y
interest_ar[3][1] = y + rad_x
#south (basically the midpoint)
interest_ar[5][0] = x + rad_x
interest_ar[5][1] = y + rad_y
#west
interest_ar[7][0] = x + rad_y
interest_ar[7][1] = y - rad_x
# northeast
interest_ar[2][0] = (interest_ar[1][0] + interest_ar[3][0])/2
interest_ar[2][1] = (interest_ar[1][1] + interest_ar[3][1])/2
#southeast
interest_ar[4][0] = (interest_ar[3][0] + interest_ar[5][0])/2
interest_ar[4][1] = (interest_ar[3][1] + interest_ar[5][1])/2
#southwest
interest_ar[6][0] = (interest_ar[5][0] + interest_ar[7][0])/2
interest_ar[6][1] = (interest_ar[5][1] + interest_ar[7][1])/2
interest_ar[8][0] = (interest_ar[7][0] + interest_ar[1][0])/2
interest_ar[8][1] = (interest_ar[7][1] + interest_ar[1][1])/2
# Setting up visuals
northpoint.center = (interest_ar[1][0], interest_ar[1][1])
eastpoint.center = (interest_ar[3][0], interest_ar[3][1])
midpoint.center = (interest_ar[5][0], interest_ar[5][1])
westpoint.center = (interest_ar[7][0], interest_ar[7][1])
mideastpoint.center = (interest_ar[2][0], interest_ar[2][1])
midwestpoint.center = (interest_ar[4][0], interest_ar[4][1])
northeastpoint.center = (interest_ar[6][0], interest_ar[6][1])
northwestpoint.center = (interest_ar[8][0], interest_ar[8][1])
return interest_ar
def findClosestInterest(agent_patch, in_ar):
# For some reason, north never gets occupied
# north east is (north/2) + (south/2)
global occupied_ar
global victory
global agentID
global timeStep
global huntEnemy
victory = False
index = -1
smallDis = 999999
tempAr = np.zeros([9])
if huntEnemy:
minDis = 0
else:
minDis = 1
# To check agent's distance of all interest points
for i in range(minDis,9):
dis = abs(int(getDistance(agent_patch, in_ar, i)))
# Add heavy weights to charge at enemy
if chargeEnemy:
if i == 0:
dis = dis*0.5
if occupied_ar[i] != 0:
# we must write a condition so that agent knows it is the
# one that is occupying it
dis = dis*5
# Add heavy weights to avoid the back
if i == 1 or i == 8 or i == 2:
if i == 1:
dis = dis*3
elif i == 2 or i == 8:
dis = dis*4
tempAr[i] = dis
# When we discover unoccupied shorter distance, replace index
if dis < smallDis:
# index is agent_patch.center[0] < 47 and agent_patch.center[0] > 53the index of interest_array of the closest interest point
smallDis = dis
index = i
# If the smallest distance is less than 10, we are currently engaged
if smallDis < 0.5:
# We are near or at the targeted interest point,
# now we should update array as occupied
occupied_ar[index] = agentID
if occupied_ar[0] != 0:
victory = True
#print 'engaged index ', index
else:
# Else we are still far away from the index
if occupied_ar[index] == agentID:
occupied_ar[index] = 0
#print 'lost track of index ', index
#else:
#print 'far away from index ', index
return index
def getBypassInterestPoints(user_patch,avoidX, avoidY, exit_x, exit_y):
# Mainly used by the enemy agent
# User agent will find a point around the blocking agent that is closest to
# the exit.
x,y = user_patch.center
rad_range = 20
tempX = x - avoidX
tempY = y - avoidY
diffR = math.sqrt(tempX**2 + tempY**2)
# Calculating our target x and y length
radX = (rad_range*tempX)/diffR
radY = (rad_range*tempY)/diffR
# Now we calculate the main interest points
# Since we are calculating perpendicular points, we reverse the X and Y
# in the pt calculation process
pt1X = avoidX + radY
pt1Y = avoidY - radX
###
pt2X = avoidX - radY
pt2Y = avoidY + radX
# Then we must determine which interest point is closer to the exit
pt1Dis = int(getDistanceScalar(pt1X, pt1Y,exit_x, exit_y))
pt2Dis = int(getDistanceScalar(pt2X, pt2Y,exit_x, exit_y))
# If point 1 is closer to the exit than point 2
if(int(pt1Dis) <= int(pt2Dis)):
print int(pt1X)
return pt1X, pt1Y
print int(pt2X)
return int(pt2X), int(pt2Y)
def getDistanceScalar(x1, y1, x2, y2):
return math.sqrt((x2 - x1)**2 + (y2 - y1)**2)
def getDistance(agent_patch, in_ar, index):
x_a, y_a = agent_patch.center
x_t = in_ar[index][0]
y_t = in_ar[index][1]
# get distance between two particles
ans = math.sqrt((x_t - x_a)**2 + (y_t - y_a)**2)
if math.isnan(ans):
print 'x_a: ',x_a
print 'y_a: ',y_a
print 'x_t: ',x_t
print 'y_t: ',y_t
init()
return math.sqrt((x_t - x_a)**2 + (y_t - y_a)**2)
def getMidDistance(enemy_patch, exit_patch):
# Get midpoint between enemy agent and exit
x, y = enemy_patch.center
x_e = x_se
y_e = y_se
# Get midpoint values
mid_x = (x + x_e)/2
mid_y = (y + y_e)/2
# Get radius values
rad_x = mid_x - x
rad_y = mid_y - y
# Returns (midpoint x and y) values and (radius x and y) values
return mid_x, mid_y, rad_x, rad_y
def top_speed_regulate(curr_speed, top_speed):
if curr_speed > top_speed:
return top_speed
elif curr_speed < -top_speed:
return -top_speed
else:
return curr_speed
def velocityCalcScalar(x1, y1, x2, y2):
veloX = top_speed_regulate( (x2 - x1) ,enemyTopSpeed)
veloY = top_speed_regulate( (y2 - y1) ,enemyTopSpeed)
return veloX, veloY
# Calculate velocity to rush to exit
def velocity_calc_exit(agent_patch, exit_patch):
x, y = agent_patch.center
#x_e, y_e = exit_patch.center
x_e = x_se
y_e = y_se
velo_vect = np.array([0.0, 0.0], dtype='f')
dis_limit_thresh = 1
velo_vect[0] = top_speed_regulate( (x_e - x)* dis_limit_thresh ,enemyTopSpeed)
velo_vect[1] = top_speed_regulate( (y_e - y)* dis_limit_thresh ,enemyTopSpeed)
return velo_vect[0], velo_vect[1]
# Calculate velocity to chase down enemy
def velocity_calc(agent_patch, enemy_patch):
x, y = agent_patch.center
x_e, y_e = enemy_patch.center
velo_vect = np.array([0.0, 0.0], dtype='f')
dis_limit_thresh = 1
velo_vect[0] = top_speed_regulate( (x_e - x)* dis_limit_thresh ,topSpeed)
velo_vect[1] = top_speed_regulate( (y_e - y)* dis_limit_thresh ,topSpeed)
return velo_vect[0], velo_vect[1]
# Calculate velocity to arrive at midpoint between enemy and exit
def velocity_calc_mid(agent_patch, enemy_patch):
x, y = agent_patch.center
x_e, y_e, _, _ = getMidDistance(enemy_patch, southExit)
# We get location of interest points as well as animate the interest points
interest_ar = getInterestPoints(enemy_patch, southExit)
interest_index = findClosestInterest(agent_patch, interest_ar)
x_e = interest_ar[interest_index][0]
y_e = interest_ar[interest_index][1]
velo_vect = np.array([0.0, 0.0], dtype='f')
dis_limit_thresh = 1
topSpeed = 0.3
velo_vect[0] = top_speed_regulate( (x_e - x)* dis_limit_thresh , topSpeed)
velo_vect[1] = top_speed_regulate( (y_e - y)* dis_limit_thresh , topSpeed)
'''
if dispersalCalc(agent_patch):
velo_vect[0] = 0
velo_vect[1] = 0
'''
return velo_vect[0], velo_vect[1]
def checkRadius(user_patch, r):
global agentLocationAR
r = 1
for i in range(0,numOfAgents-1):
x = int(agentLocationAR[i][0])
y = int(agentLocationAR[i][1])
if(inRadius(user_patch, x, y, r)):
# if an agent is in the user's radius
#print 'Nearby agent detected'
return True
return False
def checkSemiRadius(user_patch, r):
global agentLocationAR
r = 0.001
for i in range(0,numOfAgents-1):
x = int(agentLocationAR[i][0])
y = int(agentLocationAR[i][1])
if(inSemiRadius(user_patch, x, y, r)):
# if an agent is in the user's radius
#print 'Nearby agent detected'
return True
return False
def inRadius(self_patch, pointX, pointY, r):
# Helps determine if there is something near the using agent
x, y = self_patch.center # agent emitting the radius
# agent we are trying to avoid
h = pointX
k = pointY
# Equation of circle
# (x-h)^2 + (y-k)^2 <= r^2
tempX = (x - h)**2
tempY = (y - k)**2
r_2 = r**2
if tempX + tempY <= r_2:
# It is within the radius
return True
else:
return False
def inSemiRadius(self_patch, pointX, pointY, r):
# Helps determine if there is something near the using agent
h, k = self_patch.center # agent emitting the radius
# agent we are trying to avoid
x = pointX
y = pointY
# Equation of semicircle
tempTerm = r**2 - (x-h)**2
if tempTerm < 0:
# if this term is negative, that means agent to avoid is out of range
return False
tempEq = k - math.sqrt(tempTerm)
if y <= tempEq:
# It is within the radius
return True
else:
return False
def animateCos(i, patch):
x, y = patch.center
x += 0.1
y = 50 + 30 * np.cos(np.radians(i))
patch.center = (x, y)
return patch,
anim = animation.FuncAnimation(fig, animationManage,
init_func=init,
frames=maxFrame,
interval=1,
blit=True,
repeat=True)
plt.show()

NameError: name '_individual_decision' is not defined In my practice Source Code

I'm working on a simulation that shows how the entire group move as objects with different velocities move in a line. Below one is the trackback, and I can't see what is the problem here.
Traceback (most recent call last): File "C:\Users\JeeWoo Kim\Desktop\practice2.py", line 98, in <module>
map_grid = MapGrid(map_width, map_height)
File "C:\Users\JeeWoo Kim\Desktop\practice2.py", line 16, in __init__
self.outside_terrain_grid = self._generate_empty_noise_grid(self.map_width, self.map_height)
File "C:\Users\JeeWoo Kim\Desktop\practice2.py", line 49, in
_generate_empty_noise_grid
new_map_grid[x][y] += _individual_decision(self, sum_velocity, number_count)
NameError: name '_individual_decision' is not defined
Code -
import pygame
import random
import math
import time
import numpy
class MapGrid():
def __init__(self, map_width, map_height):
# set map values
self.map_width = map_width
self.map_height = map_width
# generate outside rooms
self.outside_terrain_grid = self._generate_empty_noise_grid(self.map_width, self.map_height)
def _generate_empty_noise_grid(self, map_width, map_height):
new_map_grid = [] # create our new list
for x in range(map_width):
new_map_grid.append([]) # add our columns to the array
for y in range(map_height):
if y < 20:
new_map_grid[x].append(random.choice([0,1,2])) # fill in our rows
else:
new_map_grid[x].append(0)
number_count = 0
sum_velocity = 0
for y in range(map_height):
if new_map_grid[x][y] != 0:
number_count +=1
sum_velocity += new_map_grid[x][y]
new_map_grid[x][y] += _individual_decision(self, sum_velocity, number_count)
return new_map_grid
def _individual_decision(self, sum_velocity, number_count):
mu = 1.5 # average
sigma = 0.125 # standard deviation
average_velocity = sum_velocity / number_count
critical_number =np.random.normal(mu, sigma)
if average_velocity - critical_number < 0:
return 1
elif average_velocity - critical_number >= 0:
return 2
def _generate_outside_terrain(self, empty_outside_terrain_grid, number_of_generations):
'''
creates a bubble effect with cellular automaton
'''
grid = empty_outside_terrain_grid
number_of_generations = number_of_generations
for x in range(number_of_generations):
next_grid = []
for column_index, column in enumerate(grid):
next_column = []
next_grid.append(next_column)
for tile_index, tile in enumerate(column):
top_mid = grid[column_index][tile_index - 1]
mid = grid[column_index][tile_index]
d_top_mid = grid[column_index][tile_index + 1] % 2
d_mid = grid[column_index][tile_index] % 2
v_top_mid = math.floor((grid[column_index][tile_index+1] + 1) / 2)
v_mid = math.floor((grid[column_index][tile_index] + 1) / 2)
if d_mid <= v_top_mid:
grid[column_index][tile_index] == d_mid * 2 # vi = di
next_column+v_mid.append(grid[column_index][tile_index])
elif d_mid > v_top_mid:
if numpy.random.randint(0,2) == 1:
next_grid+1[next_column.append(grid[column_index][tile_index])]
grid = next_grid
return next_grid
if __name__ == '__main__':
# general map stats
map_width = 140
map_height = 30
# start with one generation
tile_size = 8
map_grid = MapGrid(map_width, map_height)
#print map_grid.outside_terrain_grid
pygame.init()
screen = pygame.display.set_mode((map_width * tile_size,map_height * tile_size))
zero_tile = pygame.Surface((1, 1))
zero_tile.fill((0,0,0))
one_tile = pygame.Surface((1, 1))
one_tile.fill((255,255,255))
two_tile = pygame.Surface((1,1))
two_tile.fill((255,0,0))
three_tile = pygame.Surface((1,1))
three_tile.fill((0,0,204))
four_tile = pygame.Surface((1,1))
four_tile.fill((0,255,0))
colors = {0: zero_tile, 1: one_tile, 2:two_tile}
background = pygame.Surface((map_width * tile_size,map_height * tile_size))
clock = pygame.time.Clock()
first_gen = True
timer = 12
running = True
while running == True:
clock.tick(3)
for event in pygame.event.get():
if event.type == pygame.QUIT:
running = False
if first_gen:
themap = map_grid.outside_terrain_grid
else:
themap = map_grid._generate_outside_terrain(themap, 1)
for column_index, column in enumerate(themap):
for tile_index, tile in enumerate(column):
screen.blit(colors[tile], (tile_index * tile_size, column_index * tile_size))
pygame.display.flip()
if first_gen:
timer -= 1
if timer < 0:
first_gen = False
pygame.quit()
_individual_decision() is an instance method, you should call it as - self._individual_decision() . Code -
new_map_grid[x][y] += self._individual_decision(sum_velocity, number_count)
Also, you should not send self as the first arguement, just send the other arguments.

Cannot Scatter, Plot, Show() In While Loop

import math
import pylab as plt
import numpy
from numpy import sqrt
from scipy.integrate import quad
import random
numpy.seterr(divide='ignore', invalid='ignore')
def integrand (x):
return sqrt(1-x**2)
q1area, err = quad(integrand,0,1)
print "This program estimates the convergence of Pi to a ratio of one."
while True:
print "Please choose from one of the five following options:"
print " 1. 10^1\n 2. 10^2\n 3. 10^3\n"
choice = int(raw_input())
options = {1,2,3}
if choice == 1:
plt.xlim([0,15])
plt.ylim([-5,5])
x = numpy.linspace(0,15,500)
y = numpy.sqrt(1-x**2)
z = 1+x*0
xcord = []
ycord = []
under = []
above = []
pratiolist = []
yvalues = []
xvalues = range(1,11)
for i in range(10):
xcord.append(random.random())
ycord.append(random.random())
for j in ycord:
if (j <= q1area):
under.append(1)
else:
above.append(1)
punder = len(under)
if punder == 0:
punder = punder + 1
pabove = len(above)
if pabove == 0:
pabove = pabove + 1
pratio = punder / float(pabove)
pratiolist.append(pratio)
for k in pratiolist:
rtpi = k / float(math.pi)
yvalues.append(rtpi)
plt.scatter(xvalues,yvalues,c='b')
plt.plot(x,z,'g')
plt.show()
if choice == 2:
plt.xlim([0,110])
plt.ylim([-5,5])
x = numpy.linspace(0,110,500)
y = numpy.sqrt(1-x**2)
z = 1+x*0
xcord = []
ycord = []
under = []
above = []
pratiolist = []
yvalues = []
xvalues = range(1,101)
for i in range(100):
xcord.append(random.random())
ycord.append(random.random())
for j in ycord:
if (j <= q1area):
under.append(1)
else:
above.append(1)
punder = len(under)
if punder == 0:
punder = punder + 1
pabove = len(above)
if pabove == 0:
pabove = pabove + 1
pratio = punder / float(pabove)
pratiolist.append(pratio)
for k in pratiolist:
rtpi = k / float(math.pi)
yvalues.append(rtpi)
plt.scatter(xvalues,yvalues,c='b')
plt.plot(x,z,'g')
plt.show()
if choice == 3:
plt.xlim([0,1100])
plt.ylim([-5,5])
x = numpy.linspace(0,1100,500)
y = numpy.sqrt(1-x**2)
z = 1+x*0
xcord = []
ycord = []
under = []
above = []
pratiolist = []
yvalues = []
xvalues = range(1,1001)
for i in range(1000):
xcord.append(random.random())
ycord.append(random.random())
for j in ycord:
if (j <= q1area):
under.append(1)
else:
above.append(1)
punder = len(under)
if punder == 0:
punder = punder + 1
pabove = len(above)
if pabove == 0:
pabove = pabove + 1
pratio = punder / float(pabove)
pratiolist.append(pratio)
for k in pratiolist:
rtpi = k / float(math.pi)
yvalues.append(rtpi)
plt.scatter(xvalues,yvalues,c='b')
plt.plot(x,z,'g')
plt.show()
while choice not in options:
print "Not a valid choice!\n"
break
#plt.scatter(xvalues,yvalues,c='b')
#plt.plot(x,z,'g')
#plt.show()
The only way I can get the graphs to show is if I place break statements at the end of every if choice == 1,2,3, etc. and then place:
plt.scatter(xvalues,yvalues,c='b')
plt.plot(x,z,'g')
plt.show()
At the bottom of my code. This is inconvenient, I would like my to loop endlessly allowing choice between 1,2,3 without having to rerun the program. Why does Python's graphs crash when they are in whiles?
UPDATE
By using plt.draw(), I was able to get the graph to at least show but it still is not responding.
If by not responding you mean it doesn't show the prompt again this is because plt.show() will cause the program to stop until the window is closed. You can replace the plt.show()'s with plt.draw(), but to actually have windows come up you need to be in interactive mode. This is accomplished by calling plt.ion() sometime before any of the draw calls (I put it before the while True:). I've tested it an this should accomplish the behavior you're looking for.
Edit: Since you aren't redrawing the same data, calling draw() will append the data to the specific plot (i.e. typing 1 in over and over will keep adding points). I don't know what type of behavior you're looking for but you may want to call plt.clf before each scatter call if you want to clear the figure.

Python: Visualization tool for graphs

Guys I have asked this question before but did not receive a single comment or answer
I want to simulate a search algorithm on a power law graph and want to visually see the algorithm move from one node to another on the graph. How do I do that?
You can adapt this completely different code I happen to have written for Find the most points enclosed in a fixed size circle :)
The useful bit is:
It uses the basic windowing system tkinter to create a frame containing a canvas; it then does some algorithm, calling it's own 'draw()' to change the canvas and then 'update()' to redraw the screen, with a delay. From seeing how easy it is to chart in tkinter, you can perhaps move on to interactive versions etc.
import random, math, time
from Tkinter import * # our UI
def sqr(x):
return x*x
class Point:
def __init__(self,x,y):
self.x = float(x)
self.y = float(y)
self.left = 0
self.right = []
def __repr__(self):
return "("+str(self.x)+","+str(self.y)+")"
def distance(self,other):
return math.sqrt(sqr(self.x-other.x)+sqr(self.y-other.y))
def equidist(left,right,dist):
u = (right.x-left.x)
v = (right.y-left.y)
if 0 != u:
r = math.sqrt(sqr(dist)-((sqr(u)+sqr(v))/4.))
theta = math.atan(v/u)
x = left.x+(u/2)-(r*math.sin(theta))
if x < left.x:
x = left.x+(u/2)+(r*math.sin(theta))
y = left.y+(v/2)-(r*math.cos(theta))
else:
y = left.y+(v/2)+(r*math.cos(theta))
else:
theta = math.asin(v/(2*dist))
x = left.x-(dist*math.cos(theta))
y = left.y + (v/2)
return Point(x,y)
class Vis:
def __init__(self):
self.frame = Frame(root)
self.canvas = Canvas(self.frame,bg="white",width=width,height=height)
self.canvas.pack()
self.frame.pack()
self.run()
def run(self):
self.count_calc0 = 0
self.count_calc1 = 0
self.count_calc2 = 0
self.count_calc3 = 0
self.count_calc4 = 0
self.count_calc5 = 0
self.prev_x = 0
self.best = -1
self.best_centre = []
for self.sweep in xrange(0,len(points)):
self.count_calc0 += 1
if len(points[self.sweep].right) <= self.best:
break
self.calc(points[self.sweep])
self.sweep = len(points) # so that draw() stops highlighting it
print "BEST",self.best+1, self.best_centre # count left-most point too
print "counts",self.count_calc0, self.count_calc1,self.count_calc2,self.count_calc3,self.count_calc4,self.count_calc5
self.draw()
def calc(self,p):
for self.right in p.right:
self.count_calc1 += 1
if (self.right.left + len(self.right.right)) < self.best:
# this can never help us
continue
self.count_calc2 += 1
self.centre = equidist(p,self.right,radius)
assert abs(self.centre.distance(p)-self.centre.distance(self.right)) < 1
count = 0
for p2 in p.right:
self.count_calc3 += 1
if self.centre.distance(p2) <= radius:
count += 1
if self.best < count:
self.count_calc4 += 4
self.best = count
self.best_centre = [self.centre]
elif self.best == count:
self.count_calc5 += 5
self.best_centre.append(self.centre)
self.draw()
self.frame.update()
time.sleep(0.1)
def draw(self):
self.canvas.delete(ALL)
# draw best circle
for best in self.best_centre:
self.canvas.create_oval(best.x-radius,best.y-radius,\
best.x+radius+1,best.y+radius+1,fill="red",\
outline="red")
# draw current circle
if self.sweep < len(points):
self.canvas.create_oval(self.centre.x-radius,self.centre.y-radius,\
self.centre.x+radius+1,self.centre.y+radius+1,fill="pink",\
outline="pink")
# draw all the connections
for p in points:
for p2 in p.right:
self.canvas.create_line(p.x,p.y,p2.x,p2.y,fill="lightGray")
# plot visited points
for i in xrange(0,self.sweep):
p = points[i]
self.canvas.create_line(p.x-2,p.y,p.x+3,p.y,fill="blue")
self.canvas.create_line(p.x,p.y-2,p.x,p.y+3,fill="blue")
# plot current point
if self.sweep < len(points):
p = points[self.sweep]
self.canvas.create_line(p.x-2,p.y,p.x+3,p.y,fill="red")
self.canvas.create_line(p.x,p.y-2,p.x,p.y+3,fill="red")
self.canvas.create_line(p.x,p.y,self.right.x,self.right.y,fill="red")
self.canvas.create_line(p.x,p.y,self.centre.x,self.centre.y,fill="cyan")
self.canvas.create_line(self.right.x,self.right.y,self.centre.x,self.centre.y,fill="cyan")
# plot unvisited points
for i in xrange(self.sweep+1,len(points)):
p = points[i]
self.canvas.create_line(p.x-2,p.y,p.x+3,p.y,fill="green")
self.canvas.create_line(p.x,p.y-2,p.x,p.y+3,fill="green")
radius = 60
diameter = radius*2
width = 800
height = 600
points = []
# make some points
for i in xrange(0,100):
points.append(Point(random.randrange(width),random.randrange(height)))
# sort points for find-the-right sweep
points.sort(lambda a, b: int(a.x)-int(b.x))
# work out those points to the right of each point
for i in xrange(0,len(points)):
p = points[i]
for j in xrange(i+1,len(points)):
p2 = points[j]
if p2.x > (p.x+diameter):
break
if (abs(p.y-p2.y) <= diameter) and \
p.distance(p2) < diameter:
p.right.append(p2)
p2.left += 1
# sort points in potential order for sweep, point with most right first
points.sort(lambda a, b: len(b.right)-len(a.right))
# debug
for p in points:
print p, p.left, p.right
# show it
root = Tk()
vis = Vis()
root.mainloop()
You can use matplotlib for that.
Here is a simlple example of a mesh with an animated highlighted point:
import matplotlib.pyplot as plt
import time
x_size = 4
y_size = 3
# create the points and edges of the mesh
points = [(x,y) for y in range(y_size) for x in range(x_size)]
vert_edges = [((i_y*x_size)+i_x,(i_y*x_size)+i_x+1)
for i_x in range(x_size-1) for i_y in range(y_size)]
horz_edges = [((i_y*x_size)+i_x,((i_y+1)*x_size)+i_x)
for i_x in range(x_size) for i_y in range(y_size-1)]
edges = vert_edges + horz_edges
# plot all the points and edges
lines = []
for edge in edges:
x_coords, y_coords = zip(points[edge[0]], points[edge[1]])
lines.extend((x_coords, y_coords, 'g'))
plt.plot(linewidth=1, *lines)
x, y = zip(*points)
plt.plot(x, y, 'o')
# create the highlighted point
point_plot = plt.plot([0], [0], 'ro')[0]
# turn on interactive plotting mode
plt.ion()
plt.ylim(-1, y_size)
plt.xlim(-1, x_size)
# animate the highlighted point
for i_point in range(1, len(x)):
point_plot.set_xdata([x[i_point]])
point_plot.set_ydata([y[i_point]])
plt.draw()
time.sleep(0.5)
plt.show()

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