Is there already a python package allowing to graphically edit the graph of a function?
Chaco is designed to be very interactive, and is significantly more so than matplotlib. For example, the user can use the mouse to drag the legend to different places on a plot, or lasso data, or move a point around on one plot and change the results in another, or change the color of a plot by clicking on a swatch, etc.
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The amount of data that I need to plot is above 30k points. I'm aware that the hover over functionality is possible for an active graph. But is it possible to display the value of a particular data point when hovered over on saved matplotlib plots?
Are there any other interactive plotters that offer such a functionality for saved plots?
I have built a GUI with matplotlib and it contains several plots of values versus time. Now I need a special plot which just shows if a value is on or off (binary state).
Kinda like a control lamp on an analog control panel. I have 5 of those on/off values and I dont know how to do it the best way.
The "lamps" must be updateable because I stream the data from serial and analyze it in real time in my GUI.
I attached a picture where you see my current GUI. In the bottom right corner is now a bar chart, I tried to visualize the ON/OFF state with a bar, but it didn't work well and I wasn't able to animate it.
So yeah, how could I display 5 values with each an ON/OFF state in that area?
Instead of passing via bar charts I would directly plot a number of rectangles and then dynamically change their color.
You can find the documentation for rectangular patches here: http://matplotlib.org/api/patches_api.html#matplotlib.patches.Rectangle
If you need some pointers on how to animate such a patch have a look here:
https://nickcharlton.net/posts/drawing-animating-shapes-matplotlib.html
I'm experimenting with Bokeh server. I have a document with three figures and I'm trying to update two of them depending on the selection I perform on the third. The number of lines to plot in the two figures changes every time.
If I could use multi_line, this would be trivial: I would change the xs and ys in the data_source of the multi_line.
Alas, I need to use multiple scatter plots because multi_line does not support hover and I need it.
So, what I would like to accomplish is to clear the two plots every time I select something in the third, and display the scatter plots corresponding to the new selection.
There are a few possible workarounds, of course (appending scatter points to have a single GlyphRenderer with all scatter plots together, for example, but this would mean using very clunky ways to send the right hover message...). But if it was possible to just clear and update single figures, everything would be cleaner. I couldn't find anything in the docs, however.
I have read the thread you created on the mailing list and this other thread where Bryan says:
Technically, glyph renderers are stored in the .renderers property of
Plots, but I would not recommend rooting around there by hand.
Specifically the "Continuous Updating" notebook I linked earlier has
an example of updating both the data and appearance of an existing
glyph using python and push_notebook. There is not any easy way to remove glyphs at the moment,
other options would be:
recreate a new plot
set the glyph to be invisble
update the glyphs data
So it seems they are the only solutions at the moment
I have a code for plotting 3d scatterplot in python that updates after every 2 seconds (plot is dynamic). I wish to be able to adjust the values of some of the parameters on line (while plotting happens) based on which the plotting happens. Is it possible to give a textbox along with the plot from which we can take as input the required parameter value based on which this plot will then be subsequently modified?
Matplotlib does not have a textbox (or other text entry) widget. To use a textbox, you would need to embed a matplotlib graph within a separate GUI framework. To do this, decide on the GUI framework you want to use (qt, wx, gtk, or tkinter), and a textbox widget from the gui framework, and then add the plot from matplotlib. This isn't difficult and there are lots of available examples, generally best found for each specific framework you're interested in.
There might also be other pure matplotlib approaches that could work for you, such as using a matplotlib slider widget, or you could directly capture keyboard events, but without knowing exactly what you're going to for, it's hard to say.
I'm writing a web interface for a database of genes values of some experiments with CGI in Python and I want to draw a graph for the data queried. I'm using matplotlib.pyplot, draw a graph, save it, and perform it on the web page. But usually there are many experiments queried hence there are a lot of values. Sometimes I want to know which experiment does one value belong to because it's a big value, whereas it's hard to identify because the picture is small in size. The names of the experiments are long strings so that it will mess the x axis if I put all the experiment names on the x axis.
So I wonder if there is a way to draw a graph that can interact with users, i.e. if I point my mouse to some part on the graph, there would be one small window appears and tells me the exact value and what is the experiment name here. And the most important is, I can use this function when I put the graph on the web page.
Thank you.
What you want is basically D3.js rendering of your plots. As far as I know, there are currently three great ways of achieving this, all under rapid development:
MPLD3 for creating graphs with Matplotlib and serving them as interactive web graphics (see examples in Jake's blog post).
Plotly where you can either generate the plots directly via Plotly or from Matplotlib figures (e.g. using matplotlylib) and have them served by Plotly.
Bokeh if you do not mind moving away from Matplotlib.