How is a Python project set up? - python

I am doing some heavy commandline stuff (not really web based) and am new to Python, so I was wondering how to set up my files/folders/etc. Are there "header" files where I can keep all the DB connection stuff?
How/where do I define classes and objects?

Just to give you an example of a typical Python module's source, here's something with some explanation. This is a file named "Dims.py". This is not the whole file, just some parts to give an idea what's going on.
#!/usr/bin/env python
This is the standard first line telling the shell how to execute this file. Saying /usr/bin/env python instead of /usr/bin/python tells the shell to find Python via the user's PATH; the desired Python may well be in ~/bin or /usr/local/bin.
"""Library for dealing with lengths and locations."""
If the first thing in the file is a string, it is the docstring for the module. A docstring is a string that appears immediately after the start of an item, which can be accessed via its __doc__ property. In this case, since it is the module's docstring, if a user imports this file with import Dims, then Dims.__doc__ will return this string.
# Units
MM_BASIC = 1500000
MILS_BASIC = 38100
IN_BASIC = MILS_BASIC * 1000
There are a lot of good guidelines for formatting and naming conventions in a document known as PEP (Python Enhancement Proposal) 8. These are module-level variables (constants, really) so they are written in all caps with underscores. No, I don't follow all the rules; old habits die hard. Since you're starting fresh, follow PEP 8 unless you can't.
_SCALING = 1
_SCALES = {
mm_basic: MM_BASIC,
"mm": MM_BASIC,
mils_basic: MILS_BASIC,
"mil": MILS_BASIC,
"mils": MILS_BASIC,
"basic": 1,
1: 1
}
These module-level variables have leading underscores in their names. This gives them a limited amount of "privacy", in that import Dims will not let you access Dims._SCALING. However, if you need to mess with it, you can explicitly say something like import Dims._SCALING as scaling.
def UnitsToScale(units=None):
"""Scales the given units to the current scaling."""
if units is None:
return _SCALING
elif units not in _SCALES:
raise ValueError("unrecognized units: '%s'." % units)
return _SCALES[units]
UnitsToScale is a module-level function. Note the docstring and the use of default values and exceptions. No spaces around the = in default value declarations.
class Length(object):
"""A length. Makes unit conversions easier.
The basic, mm, and mils properties can be used to get or set the length
in the desired units.
>>> x = Length(mils=1000)
>>> x.mils
1000.0
>>> x.mm
25.399999999999999
>>> x.basic
38100000L
>>> x.mils = 100
>>> x.mm
2.54
"""
The class declaration. Note the docstring has things in it that look like Python command line commands. These care called doctests, in that they are test code in the docstring. More on this later.
def __init__(self, unscaled=0, basic=None, mm=None, mils=None, units=None):
"""Constructs a Length.
Default contructor creates a length of 0.
>>> Length()
Length(basic=0)
Length(<float>) or Length(<string>) creates a length with the given
value at the current scale factor.
>>> Length(1500)
Length(basic=1500)
>>> Length("1500")
Length(basic=1500)
"""
# Straight copy
if isinstance(unscaled, Length):
self._x = unscaled._x
return
# rest omitted
This is the initializer. Unlike C++, you only get one, but you can use default arguments to make it look like several different constructors are available.
def _GetBasic(self): return self._x
def _SetBasic(self, x): self._x = x
basic = property(_GetBasic, _SetBasic, doc="""
This returns the length in basic units.""")
This is a property. It allows you to have getter/setter functions while using the same syntax as you would for accessing any other data member, in this case, myLength.basic = 10 does the same thing as myLength._SetBasic(10). Because you can do this, you should not write getter/setter functions for your data members by default. Just operate directly on the data members. If you need to have getter/setter functions later, you can convert the data member to a property and your module's users won't need to change their code. Note that the docstring is on the property, not the getter/setter functions.
If you have a property that is read-only, you can use property as a decorator to declare it. For example, if the above property was to be read-only, I would write:
#property
def basic(self):
"""This returns the length in basic units."""
return self._x
Note that the name of the property is the name of the getter method. You can also use decorators to declare setter methods in Python 2.6 or later.
def __mul__(self, other):
"""Multiplies a Length by a scalar.
>>> Length(10)*10
Length(basic=100)
>>> 10*Length(10)
Length(basic=100)
"""
if type(other) not in _NumericTypes:
return NotImplemented
return Length(basic=self._x * other)
This overrides the * operator. Note that you can return the special value NotImplemented to tell Python that this operation isn't implemented (in this case, if you try to multiply by a non-numeric type like a string).
__rmul__ = __mul__
Since code is just a value like anything else, you can assign the code of one method to another. This line tells Python that the something * Length operation uses the same code as Length * something. Don't Repeat Yourself.
Now that the class is declared, I can get back to module code. In this case, I have some code that I want to run only if this file is executed by itself, not if it's imported as a module. So I use the following test:
if __name__ == "__main__":
Then the code in the if is executed only if this is being run directly. In this file, I have the code:
import doctest
doctest.testmod()
This goes through all the docstrings in the module and looks for lines that look like Python prompts with commands after them. The lines following are assumed to be the output of the command. If the commands output something else, the test is considered to have failed and the actual output is printed. Read the doctest module documentation for all the details.
One final note about doctests: They're useful, but they're not the most versatile or thorough tests available. For those, you'll want to read up on unittests (the unittest module).

Each python source file is a module. There are no "header" files. The basic idea is that when you import "foo" it'll load the code from "foo.py" (or a previously compiled version of it). You can then access the stuff from the foo module by saying foo.whatever.
There seem to be two ways for arranging things in Python code. Some projects use a flat layout, where all of the modules are at the top-level. Others use a hierarchy. You can import foo/bar/baz.py by importing "foo.bar.baz". The big gotcha with hierarchical layout is to have __init__.py in the appropriate directories (it can even be empty, but it should exist).
Classes are defined like this:
class MyClass(object):
def __init__(self, x):
self.x = x
def printX(self):
print self.x
To create an instance:
z = MyObject(5)

You can organize it in whatever way makes the most sense for your application. I don't exactly know what you're doing so I can't be certain what the best organization would be for you, but you can pretty much split it up as you see fit and just import what you need.
You can define classes in any file, and you can define as many classes as you would like in a script (unlike Java). There are no official header files (not like C or C++), but you can use config files to store info about connecting to a DB, whatever, and use configparser (a standard library function) to organize them.
It makes sense to keep like things in the same file, so if you have a GUI, you might have one file for the interface, and if you have a CLI, you might keep that in a file by itself. It's less important how your files are organized and more important how the source is organized into classes and functions.

This would be the place to look for that: http://docs.python.org/reference/.
First of all, compile and install pip: http://pypi.python.org/pypi/pip. It is like Ubuntu's apt-get. You run it via a Terminal by typing in pip install package-name. It has a database of packages, so you can install/uninstall stuff quite easily with it.
As for importing and "header" files, from what I can tell, if you run import foo, Python looks for foo.py in the current folder. If it's not there, it looks for eggs (folders unzipped in the Python module directory) and imports those.
As for defining classes and objects, here's a basic example:
class foo(foobar2): # I am extending a class, in this case 'foobar2'. I take no arguments.
__init__(self, the, list, of, args = True): # Instead, the arguments get passed to me. This still lets you define a 'foo()' objects with three arguments, only you let '__init__' take them.
self.var = 'foo'
def bar(self, args):
self.var = 'bar'
def foobar(self): # Even if you don't need arguments, never leave out the self argument. It's required for classes.
print self.var
foobar = foo('the', 'class', 'args') # This is how you initialize me!
Read more on this in the Python Reference, but my only tip is to never forget the self argument in class functions. It will save you a lot of debugging headaches...
Good luck!

There's no some fixed structure for Python programs, but you can take Django project as an example. Django project consists of one settings.py module, where global settings (like your example with DB connection properties) are stored and pluggable applications. Each application has it's own models.py module, which stores database models and, possibly, other domain specific objects. All the rest is up to you.
Note, that these advices are not specific to Python. In C/C++ you probably used similar structure and kept settings in XML. Just forget about headers and put settings in plain in .py file, that's all.

Related

Refactoring a Python class to take a dynamic parameter without changing calling pattern dramatically

I have a Python class in a base_params.py module within an existing codebase, which looks like this:
import datetime
class BaseParams:
TIMESTAMP = datetime.datetime.now()
PATH1 = f'/foo1/bar/{TIMESTAMP}/baz'
PATH2 = f'/foo2/bar/{TIMESTAMP}/baz'
Callers utilize it this way:
from base_params import BaseParams as params
print(params.PATH1)
Now, I want to replace the TIMESTAMP value with one that is dynamically specified at runtime (through e.g. CLI arguments).
Is there a way to do this in Python without requiring my callers to refactor their code in a dramatic way? This is currently confounding me because the contents of the class BaseParams get executed at 'compile' time, so there is no opportunity there to pass in a dynamic value as it's currently structured. And in some of my existing code, this object is being treated as "fully ready" at 'compile' time, for example, its values are used as function argument defaults:
def some_function(value1, value2=params.PATH1):
...
I am wondering if there is some way to work with Python modules and/or abuse Python's __special_methods__ to get this existing code pattern working more or less as-is, without a deeper refactoring of some kind.
My current expectation is "this is not really possible" because of that last example, where the default value is being specified in the function signature. But I thought I should check with the Python wizards to see if there may be a suitably Pythonic way around this.
Yes, you just need to make sure that the command line argument is parsed before the class is defined and before any function that uses the class's attribute as a default argument is defined (but that should already be the case).
(using sys.argv for sake of simplicity. It is better to use an actual argument parser such as argparse)
import datetime
import sys
class BaseParams:
try:
TIMESTAMP = sys.argv[1]
except IndexError:
TIMESTAMP = datetime.datetime.now()
PATH1 = f'/foo1/bar/{TIMESTAMP}/baz'
PATH2 = f'/foo2/bar/{TIMESTAMP}/baz'
print(BaseParams.TIMESTAMP)
$ python main.py dummy-argument-from-cli
outputs
dummy-argument-from-cli
while
$ python main.py
outputs
2021-06-26 02:32:12.882601
You can still totally replace the value of a class attribute after the class has been defined:
BaseParams.TIMESTAMP = <whatever>
There are definitely some more "magic" things you can do though, such as a class factory of some kind. Since Python 3.7 you can also take advantage of module __getattr__ to create a kind of factory for the BaseParams class (PEP 562)
In base_params.py you might rename BaseParams to _BaseParams or BaseParamsBase or something like that :)
Then at the module level define:
def __getattr__(attr):
if attr == 'BaseParams':
params = ... # whatever code you need to determine class attributes for BaseParams
return type('BaseParams', (_BaseParams,), params)
raise AttributeError(attr)

Export decorator that manages __all__

A proper Python module will list all its public symbols in a list called __all__. Managing that list can be tedious, since you'll have to list each symbol twice. Surely there are better ways, probably using decorators so one would merely annotate the exported symbols as #export.
How would you write such a decorator? I'm certain there are different ways, so I'd like to see several answers with enough information that users can compare the approaches against one another.
In Is it a good practice to add names to __all__ using a decorator?, Ed L suggests the following, to be included in some utility library:
import sys
def export(fn):
"""Use a decorator to avoid retyping function/class names.
* Based on an idea by Duncan Booth:
http://groups.google.com/group/comp.lang.python/msg/11cbb03e09611b8a
* Improved via a suggestion by Dave Angel:
http://groups.google.com/group/comp.lang.python/msg/3d400fb22d8a42e1
"""
mod = sys.modules[fn.__module__]
if hasattr(mod, '__all__'):
name = fn.__name__
all_ = mod.__all__
if name not in all_:
all_.append(name)
else:
mod.__all__ = [fn.__name__]
return fn
We've adapted the name to match the other examples. With this in a local utility library, you'd simply write
from .utility import export
and then start using #export. Just one line of idiomatic Python, you can't get much simpler than this. On the downside, the module does require access to the module by using the __module__ property and the sys.modules cache, both of which may be problematic in some of the more esoteric setups (like custom import machinery, or wrapping functions from another module to create functions in this module).
The python part of the atpublic package by Barry Warsaw does something similar to this. It offers some keyword-based syntax, too, but the decorator variant relies on the same patterns used above.
This great answer by Aaron Hall suggests something very similar, with two more lines of code as it doesn't use __dict__.setdefault. It might be preferable if manipulating the module __dict__ is problematic for some reason.
You could simply declare the decorator at the module level like this:
__all__ = []
def export(obj):
__all__.append(obj.__name__)
return obj
This is perfect if you only use this in a single module. At 4 lines of code (plus probably some empty lines for typical formatting practices) it's not overly expensive to repeat this in different modules, but it does feel like code duplication in those cases.
You could define the following in some utility library:
def exporter():
all = []
def decorator(obj):
all.append(obj.__name__)
return obj
return decorator, all
export, __all__ = exporter()
export(exporter)
# possibly some other utilities, decorated with #export as well
Then inside your public library you'd do something like this:
from . import utility
export, __all__ = utility.exporter()
# start using #export
Using the library takes two lines of code here. It combines the definition of __all__ and the decorator. So people searching for one of them will find the other, thus helping readers to quickly understand your code. The above will also work in exotic environments, where the module may not be available from the sys.modules cache or where the __module__ property has been tampered with or some such.
https://github.com/russianidiot/public.py has yet another implementation of such a decorator. Its core file is currently 160 lines long! The crucial points appear to be the fact that it uses the inspect module to obtain the appropriate module based on the current call stack.
This is not a decorator approach, but provides the level of efficiency I think you're after.
https://pypi.org/project/auto-all/
You can use the two functions provided with the package to "start" and "end" capturing the module objects that you want included in the __all__ variable.
from auto_all import start_all, end_all
# Imports outside the start and end functions won't be externally availab;e.
from pathlib import Path
def a_private_function():
print("This is a private function.")
# Start defining externally accessible objects
start_all(globals())
def a_public_function():
print("This is a public function.")
# Stop defining externally accessible objects
end_all(globals())
The functions in the package are trivial (a few lines), so could be copied into your code if you want to avoid external dependencies.
While other variants are technically correct to a certain extent, one might also be sure that:
if the target module already has __all__ declared, it is handled correctly;
target appears in __all__ only once:
# utils.py
import sys
from typing import Any
def export(target: Any) -> Any:
"""
Mark a module-level object as exported.
Simplifies tracking of objects available via wildcard imports.
"""
mod = sys.modules[target.__module__]
__all__ = getattr(mod, '__all__', None)
if __all__ is None:
__all__ = []
setattr(mod, '__all__', __all__)
elif not isinstance(__all__, list):
__all__ = list(__all__)
setattr(mod, '__all__', __all__)
target_name = target.__name__
if target_name not in __all__:
__all__.append(target_name)
return target

How to change the string to class object in another file

I already use this function to change some string to class object.
But now I have defined a new module. How can I implement the same functionality?
def str2class(str):
return getattr(sys.modules[__name__], str)
I want to think some example, but it is hard to think. Anyway, the main problem is maybe the file path problem.
If you really need an example, the GitHub code is here.
The Chain.py file needs to perform an auto action mechanism. Now it fails.
New approach:
Now I put all files under one filefold, and it works, but if I use the modules concept, it fails. So if the problem is in a module file, how can I change the string object to relative class object?
Thanks for your help.
You can do this by accessing the namespace of the module directly:
import module
f = module.__dict__["func_name"]
# f is now a function and can be called:
f()
One of the greatest things about Python is that the internals are accessible to you, and that they fit the language paradigm. A name (of a variable, class, function, whatever) in a namespace is actually just a key in a dictionary that maps to that name's value.
If you're interested in what other language internals you can play with, try running dir() on things. You'd be surprised by the number of hidden methods available on most of the objects.
You probably should write this function like this:
def str2class(s):
return globals()[s]
It's really clearer and works even if __name__ is set to __main__.

Python namespaces: How to make unique objects accessible in other modules?

I am writing a moderate-sized (a few KLOC) PyQt app. I started out writing it in nice modules for ease of comprehension but I am foundering on the rules of Python namespaces. At several points it is important to instantiate just one object of a class as a resource for other code.
For example: an object that represents Aspell attached as a subprocess, offering a check(word) method. Another example: the app features a single QTextEdit and other code needs to call on methods of this singular object, e.g. "if theEditWidget.document().isEmpty()..."
No matter where I instantiate such an object, it can only be referenced from code in that module and no other. So e.g. the code of the edit widget can't call on the Aspell gateway object unless the Aspell object is created in the same module. Fine except it is also needed from other modules.
In this question the bunch class is offered, but it seems to me a bunch has exactly the same problem: it's a unique object that can only be used in the module where it's created. Or am I completely missing the boat here?
OK suggested elsewhere, this seems like a simple answer to my problem. I just tested the following:
junk_main.py:
import junk_A
singularResource = junk_A.thing()
import junk_B
junk_B.handle = singularResource
print junk_B.look()
junk_A.py:
class thing():
def __init__(self):
self.member = 99
junk_B.py:
def look():
return handle.member
When I run junk_main it prints 99. So the main code can inject names into modules just by assignment. I am trying to think of reasons this is a bad idea.
You can access objects in a module with the . operator just like with a function. So, for example:
# Module a.py
a = 3
>>> import a
>>> print a.a
3
This is a trivial example, but you might want to do something like:
# Module EditWidget.py
theEditWidget = EditWidget()
...
# Another module
import EditWidget
if EditWidget.theEditWidget.document().isEmpty():
Or...
import * from EditWidget
if theEditWidget.document().isEmpty():
If you do go the import * from route, you can even define a list named __all__ in your modules with a list of the names (as strings) of all the objects you want your module to export to *. So if you wanted only theEditWidget to be exported, you could do:
# Module EditWidget.py
__all__ = ["theEditWidget"]
theEditWidget = EditWidget()
...
It turns out the answer is simpler than I thought. As I noted in the question, the main module can add names to an imported module. And any code can add members to an object. So the simple way to create an inter-module communication area is to create a very basic object in the main, say IMC (for inter-module communicator) and assign to it as members, anything that should be available to other modules:
IMC.special = A.thingy()
IMC.important_global_constant = 0x0001
etc. After importing any module, just assign IMC to it:
import B
B.IMC = IMC
Now, this is probably not the greatest idea from a software design standpoint. If you just limit IMC to holding named constants, it acts like a C header file. If it's just to give access to singular resources, it's like a link extern. But because of Python's liberal rules, code in any module can modify or add members to IMC. Used in an undisciplined way, "who changed that" could be a debugging issue. If there are multiple processes, race conditions are a danger.
At several points it is important to instantiate just one object of a class as a resource for other code.
Instead of trying to create some sort of singleton factory, can you not create the single-use object somewhere between the main point of entry for the program and instantiating the object that needs it? The single-use object can just be passed as a parameter to the other object. Logically, then, you won't create the single-use object more than once.
For example:
def main(...):
aspell_instance = ...
myapp = MyAppClass(aspell_instance)
or...
class SomeWidget(...):
def __init__(self, edit_widget):
self.edit_widget = edit_widget
def onSomeEvent(self, ...):
if self.edit_widget.document().isEmpty():
....
I don't know if that's clear enough, or if it's applicable to your situation. But to be honest, the only time I've found I can't do this is in a CherryPy-based webserver, where the points of entry were pretty much everywhere.

Embedding test code or data within doctest strings

I'd like to have several of the doctests in a file share test data and/or functions. Is there a way to do this without locating them in an external file or within the code of the file being tested?
update
"""This is the docstring for the module ``fish``.
I've discovered that I can access the module under test
from within the doctest, and make changes to it, eg
>>> import fish
>>> fish.data = {1: 'red', 2: 'blue'}
"""
def jef():
"""
Modifications made to the module will persist across subsequent tests:
>>> import fish
>>> fish.data[1]
'red'
"""
pass
def seuss():
"""
Although the doctest documentation claims that
"each time doctest finds a docstring to test,
it uses a shallow copy of M‘s globals",
modifications made to the module by a doctest
are not imported into the context of subsequent docstrings:
>>> data
Traceback (most recent call last):
...
NameError: name 'data' is not defined
"""
pass
So I guess that doctest copies the module once, and then copies the copy for each docstring?
In any case, importing the module into each docstring seems usable, if awkward.
I'd prefer to use a separate namespace for this, to avoid accidentally trampling on actual module data that will or will not be imported into subsequent tests in an possibly undocumented manner.
It's occurred to me that it's (theoretically) possible to dynamically create a module in order to contain this namespace. However as yet I've not gotten any direction on how to do that from the question I asked about that a while back. Any information is quite welcome! (as a response to the appropriate question)
In any case I'd prefer to have the changes be propagated directly into the namespace of subsequent docstrings. So my original question still stands, with that as a qualifier.
This is the sort of thing that causes people to turn away from doctests: as your tests grow in complexity, you need real programming tools to be able to engineer your tests just as you would engineer your product code.
I don't think there's a way to include shared data or functions in doctests other than defining them in your product code and then using them in the doctests.
You are going to need to use real code to define some of your test infrastructure. If you like doctests, you can use that infrastructure from your doctests.
This is possible, albeit perhaps not advertised as loudly.
To obtain literate modules with tests that all use a shared execution context (i.e. individual tests can share and re-use their results), one has to look at the relevant part of documentation which says:
... each time doctest finds a docstring to test, it uses a shallow copy of M‘s globals, so that running tests doesn’t change the module’s real globals, and so that one test in M can’t leave behind crumbs that accidentally allow another test to work.
...
You can force use of your own dict as the execution context by passing globs=your_dict to testmod() or testfile() instead.
Given this, I managed to reverse-engineer from doctest module that besides using copies (i.e. the dict's copy() method), it also clears the globals dict (using clear()) after each test.
Thus, one can patch their own globals dictionary with something like:
class Context(dict):
def clear(self):
pass
def copy(self):
return self
and then use it as:
import doctest
from importlib import import_module
module = import_module('some.module')
doctest.testmod(module,
# Make a copy of globals so tests in this
# module don't affect the tests in another
glob=Context(module.__dict__.copy()))

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