I am wondering if it is possible to create a graph using python and possibly networkx, overlaid subgraphs having different colors? These subgraphs are cluster of nodes. An example of such graph can be found at:
http://www.barabasilab.com/pubs/CCNR-ALB_Publications/200904-10_PLoSCompBio-HumanPhenotypes/200904-10_PLoSCompBio-Fig2sm.png
Related
I need to draw fractal graph or self-similar graph (for example like in picture below)
Does the networkx library have a special function for constructing this graph?
I m trying to make an interactive graph on plotly, where I first create the network graph using networkx, and then graph it with plotly so that it can be hosted and be interative and shared, very similar to what's described here: https://plotly.com/python/network-graphs/
I would like to make the edges curved -- in networkx I can do this with connectionstyle="arc3,rad=-0.3". How do I do this in Plotly?
My main problem is that edges are overlapping, I want to remove that overlapping if there is any better option please suggest but restricted to plotly only.
I searched in documentations of go.scatter too but didn't found anything relevant to my query.
I'm trying to draw a directed graph in python with networkx
It uses Fruchterman-Reingold force-directed algorithm to position nodes. However, I couldn't get a result of graph with minimum overlapping edges. I want something like this in NetworkX or some other python API.
Can Fruchterman-Reingold algorithm produce a graph with minimum overlapping edges? If it can, which parameter should I adjust? If it can not, is there any API or alogrithm to use in python?
My code to visualize
pos = nx.spring_layout(G, k=100, iterations=500, seed=1)
Let me know if you need more info.!
Thanks!
I'm trying to make an interactive graph on plotly, where I first create the network graph using networkx, and then graph it with plotly so that it can be hosted and be interative and shared, very similar to what's described here: https://plotly.com/python/network-graphs/
I would like to make the edges curved -- in networkx I can do this with connectionstyle="arc3,rad=-0.3". How do I do this in Plotly?
Could anyone help me with generating graphs of predetermined assortativity using networkx? I want to show as an example that two networks with the same density and average centrality can have very different assortativities. Is there any way of generating these graphs using networkx? Thanks, Rajat.