I want to capture an output in python.
My code:-
import os
import sys
import subprocess
import time
cmd = './abc'
proc = subprocess.Popen(cmd)
time.sleep(12)
stdoutOrigin=sys.stdout
sys.stdout = open("log.txt", "w")
sys.stdout.close()
sys.stdout=stdoutOrigin
proc.terminate()
Problem is it never comes out of ./abc and is always stuck there. I need kill the process .
Normally i have to give CTRL+C to come out of it.
In this case how can i capture the output and save in a file which comes every 30 seconds .I need to capture it once.
You can redirect the output of a subprocess when starting it. Consider the following:
with open('proc.out', 'w') as proc_out:
subprocess.run(cmd, stdout=proc_out)
The call to run is blocking, but all the output is written to the output file. Once your subprocess finished, so does your Python script. You can still kill it prematurely, however.
Ok i found the answer and since Using only timeout would throw error
what i did was i added it to try and expect block.
import os
import sys
import subprocess
import time
cmd = './abc'
try:
with open('proc.out', 'w') as proc_out:
subprocess.run(cmd, stdout=proc_out , timeout = 30)
except subprocess.TimeoutExpired:
pass
I'm trying to integrate ESA'2 sen2cor python-script into my workflow. To do this I create a subprocess with which I call the "L2A_Process.bat" file, which in turn calls the "L2A_Process.py" script.
I want to launch the sen2cor-script with a timeout since it gets stuck and freezes from time to time, so as to automatically re-launch it if it failed.
To launch it and catch a timeout I successfully used the following script:
import os, subprocess
from signal import CTRL_BREAK_EVENT
timeout = 3600 #1hour
l1c_safe_path = "path/to/my/input/file.SAFE" #product that I want to process
command = ["L2A_process.bat", l1c_safe_path]
p = subprocess.Popen(command,shell=False, creationflags=subprocess.CREATE_NEW_PROCESS_GROUP)
try:
p.wait(timeout)
except subprocess.TimeoutExpired:
os.kill(p.pid, CTRL_BREAK_EVENT)
This is as far as I got. It results in the sen2cor-script being paused giving the following output:
Terminate batch job (Y/N)
I'd like to know how I can properly terminate my subprocess "p" with all it own child-subprocesses (i.e. "L2A_Process.py").
Some observations:
This script needs to run on Windows;
I've tried to kill the subprocess without the creationflag I've used in the example above: this results in the subprocess being killed but the "L2A_Process.py" script deteaches an keeps running (which is the core of my problem);
I cannot use a CTRL_C_EVENT since I want to re-launch the failed "L2A_Process.py" in a loop until it succeeds.
This code works for me to monitor Sen2cor status while converting L1C to L2A for Sentinel 2 data. The Sen2cor process is time and cpu consuming so be patient. It took half an hour to create L2A with DEM, DDV, etc. Hope it helps
from subprocess import Popen, PIPE
import os
pathtoprodS1C = "path_to_L1C_product" // safe file
outdirS2A = "output_dir" // where L2A files will be placed
pathtoL2Process = "path_to_L2A_Process" //if not in path
pathtoGIPP = "path_to_your_GIPP/L2A_GIPP.xml"
procName = "./L2A_Process"
os.chdir(pathtoL2Process)
import shlex
pcall = "./{} {} --output_dir {} --tif --GIP_L2A {}".format(procName,
pathtoprodS1C,
pathtoprodS2A,
pathtoGIPP)
args = shlex.split(pcall)
print(args)
try:
p = Popen(args, stdout=PIPE)
eut = p.stdout.readline()
while eut:
eut = p.stdout.readline()
print(eut)
finally:
print('Sen2Cor is Done')
exit()
Okay I'm officially out of ideas after running each and every sample I could find on google up to 19th page. I have a "provider" script. The goal of this python script is to start up other services that run indefinitely even after this "provider" stopped running. Basically, start the process then forget about it but continue the script and not stopping it...
My problem: python-daemon... I have actions (web-service calls to start/stop/get status from the started services). I create the start commands on the fly and perform variable substitution on the config files as required.
Let's start from this point: I have a command to run (A bash script that executes a java process - a long running service that will be stopped sometime later).
def start(command, working_directory):
pidfile = os.path.join(working_directory, 'application.pid')
# I expect the pid of the started application to be here. The file is not created. Nothing is there.
context = daemon.DaemonContext(working_directory=working_directory,
pidfile=daemon.pidfile.PIDLockFile(pidfile))
with context:
psutil.Popen(command)
# This part never runs. Even if I put a simple print statement at this point, that never appears. Debugging in pycharms shows that my script returns with 0 on with context
with open(pidfile, 'r') as pf:
pid = pf.read()
return pid
From here on in my caller to this method I prepare a json object to return to the client which essentially contains an instance_id (don't mind it) and a pid (that'll be used to stop this process in another request.
What happens? After with context my application exits with status 0, nothing is returned, no json response gets created, no pidfile gets created only the executed psutil.Popen command runs. How can I achieve what I need? I need an independently running process and need to know its PID in order to stop it later on. The executed process must run even if the current python script stops for some reason. I can't get around the shell script as that application is not mine I have to use what I have.
Thanks for any tip!
#Edit:
I tried using simply the Popen from psutil/subprocess with somewhat more promising result.
def start(self, command):
import psutil/subprocess
proc = psutil.Popen(command)
return str(proc.pid)
Now If I debug the application and wait some undefined time on the return statement everything is working great! The service is running the pid is there, I can stop later on. Then I simply ran the provider without debugging. It returns the pid but the process is not running. Seems like Popen has no time to start the service because the whole provider stops faster.
#Update:
Using os.fork:
#staticmethod
def __start_process(command, working_directory):
pid = os.fork()
if pid == 0:
os.chdir(working_directory)
proc = psutil.Popen(command)
with open('application.pid', 'w') as pf:
pf.write(proc.pid)
def start(self):
...
__start_process(command, working_directory)
with open(os.path.join(working_directory, 'application.pid'), 'r') as pf:
pid = int(pf.read())
proc = psutil.Process(pid)
print("RUNNING" if proc.status() == psutil.STATUS_RUNNING else "...")
After running the above sample, RUNNING is written on console. After the main script exits because I'm not fast enough:
ps auxf | grep
No instances are running...
Checking the pidfile; sure it's there it was created
cat /application.pid
EMPTY 0bytes
From multiple partial tips i got, finally managed to get it working...
def start(command, working_directory):
pid = os.fork()
if pid == 0:
os.setsid()
os.umask(0) # I'm not sure about this, not on my notebook at the moment
os.execv(command[0], command) # This was strange as i needed to use the name of the shell script twice: command argv[0] [args]. Upon using ksh as command i got a nice error...
else:
with open(os.path.join(working_directory, 'application.pid'), 'w') as pf:
pf.write(str(pid))
return pid
That together solved the issue. The started process is not a child process of the running python script and won't stop when the script terminates.
Have you tried with os.fork()?
In a nutshell, os.fork() spawns a new process and returns the PID of that new process.
You could do something like this:
#!/usr/bin/env python
import os
import subprocess
import sys
import time
command = 'ls' # YOUR COMMAND
working_directory = '/etc' # YOUR WORKING DIRECTORY
def child(command, directory):
print "I'm the child process, will execute '%s' in '%s'" % (command, directory)
# Change working directory
os.chdir(directory)
# Execute command
cmd = subprocess.Popen(command
, shell=True
, stdout=subprocess.PIPE
, stderr=subprocess.PIPE
, stdin=subprocess.PIPE
)
# Retrieve output and error(s), if any
output = cmd.stdout.read() + cmd.stderr.read()
print output
# Exiting
print 'Child process ending now'
sys.exit(0)
def main():
print "I'm the main process"
pid = os.fork()
if pid == 0:
child(command, working_directory)
else:
print 'A subprocess was created with PID: %s' % pid
# Do stuff here ...
time.sleep(5)
print 'Main process ending now.'
sys.exit(0)
if __name__ == '__main__':
main()
Further info:
Documentation: https://docs.python.org/2/library/os.html#os.fork
Examples: http://www.python-course.eu/forking.php
Another related-question: Regarding The os.fork() Function In Python
I am running on a Linux x86-64 system. From a Python (2.6) script, I wish to periodically check whether a given process (identified by pid) has become "defunct"/zombie (this means that entry in the process table exists but the process is doing nothing). It would be also good to know how much CPU the process is consuming (similar to what 'top' command shows).
Can somebody give me some pointers on how I can get these in Python?
I'd use the psutil library:
import psutil
proc = psutil.Process(pid)
if proc.status() == psutil.STATUS_ZOMBIE:
# Zombie process!
you can get top result in python as below:
linux:
import sys, os
f = os.popen("top -p 1 -n 1", "r")
text = f.read()
print text
update
windows:
from os import popen
from sys import stdin
ps = popen("C:/WINDOWS/system32/tasklist.exe","r")
pp = ps.readlines()
ps.close()
# wow, look at the robust parser!
pp.pop(0) # blank line
ph = pp.pop(0) # header line
pp.pop(0) # ===
print ("%d processes reported." % len(pp))
print ("First process in list:")
print (pp[0])
stdin.readline()
I have a python daemon running as a part of my web app/ How can I quickly check (using python) if my daemon is running and, if not, launch it?
I want to do it that way to fix any crashes of the daemon, and so the script does not have to be run manually, it will automatically run as soon as it is called and then stay running.
How can i check (using python) if my script is running?
A technique that is handy on a Linux system is using domain sockets:
import socket
import sys
import time
def get_lock(process_name):
# Without holding a reference to our socket somewhere it gets garbage
# collected when the function exits
get_lock._lock_socket = socket.socket(socket.AF_UNIX, socket.SOCK_DGRAM)
try:
# The null byte (\0) means the socket is created
# in the abstract namespace instead of being created
# on the file system itself.
# Works only in Linux
get_lock._lock_socket.bind('\0' + process_name)
print 'I got the lock'
except socket.error:
print 'lock exists'
sys.exit()
get_lock('running_test')
while True:
time.sleep(3)
It is atomic and avoids the problem of having lock files lying around if your process gets sent a SIGKILL
You can read in the documentation for socket.close that sockets are automatically closed when garbage collected.
Drop a pidfile somewhere (e.g. /tmp). Then you can check to see if the process is running by checking to see if the PID in the file exists. Don't forget to delete the file when you shut down cleanly, and check for it when you start up.
#/usr/bin/env python
import os
import sys
pid = str(os.getpid())
pidfile = "/tmp/mydaemon.pid"
if os.path.isfile(pidfile):
print "%s already exists, exiting" % pidfile
sys.exit()
file(pidfile, 'w').write(pid)
try:
# Do some actual work here
finally:
os.unlink(pidfile)
Then you can check to see if the process is running by checking to see if the contents of /tmp/mydaemon.pid are an existing process. Monit (mentioned above) can do this for you, or you can write a simple shell script to check it for you using the return code from ps.
ps up `cat /tmp/mydaemon.pid ` >/dev/null && echo "Running" || echo "Not running"
For extra credit, you can use the atexit module to ensure that your program cleans up its pidfile under any circumstances (when killed, exceptions raised, etc.).
The pid library can do exactly this.
from pid import PidFile
with PidFile():
do_something()
It will also automatically handle the case where the pidfile exists but the process is not running.
My solution is to check for the process and command line arguments
Tested on windows and ubuntu linux
import psutil
import os
def is_running(script):
for q in psutil.process_iter():
if q.name().startswith('python'):
if len(q.cmdline())>1 and script in q.cmdline()[1] and q.pid !=os.getpid():
print("'{}' Process is already running".format(script))
return True
return False
if not is_running("test.py"):
n = input("What is Your Name? ")
print ("Hello " + n)
Of course the example from Dan will not work as it should be.
Indeed, if the script crash, rise an exception, or does not clean pid file, the script will be run multiple times.
I suggest the following based from another website:
This is to check if there is already a lock file existing
\#/usr/bin/env python
import os
import sys
if os.access(os.path.expanduser("~/.lockfile.vestibular.lock"), os.F_OK):
#if the lockfile is already there then check the PID number
#in the lock file
pidfile = open(os.path.expanduser("~/.lockfile.vestibular.lock"), "r")
pidfile.seek(0)
old_pid = pidfile.readline()
# Now we check the PID from lock file matches to the current
# process PID
if os.path.exists("/proc/%s" % old_pid):
print "You already have an instance of the program running"
print "It is running as process %s," % old_pid
sys.exit(1)
else:
print "File is there but the program is not running"
print "Removing lock file for the: %s as it can be there because of the program last time it was run" % old_pid
os.remove(os.path.expanduser("~/.lockfile.vestibular.lock"))
This is part of code where we put a PID file in the lock file
pidfile = open(os.path.expanduser("~/.lockfile.vestibular.lock"), "w")
pidfile.write("%s" % os.getpid())
pidfile.close()
This code will check the value of pid compared to existing running process., avoiding double execution.
I hope it will help.
There are very good packages for restarting processes on UNIX. One that has a great tutorial about building and configuring it is monit. With some tweaking you can have a rock solid proven technology keeping up your daemon.
Came across this old question looking for solution myself.
Use psutil:
import psutil
import sys
from subprocess import Popen
for process in psutil.process_iter():
if process.cmdline() == ['python', 'your_script.py']:
sys.exit('Process found: exiting.')
print('Process not found: starting it.')
Popen(['python', 'your_script.py'])
There are a myriad of options. One method is using system calls or python libraries that perform such calls for you. The other is simply to spawn out a process like:
ps ax | grep processName
and parse the output. Many people choose this approach, it isn't necessarily a bad approach in my view.
I'm a big fan of Supervisor for managing daemons. It's written in Python, so there are plenty of examples of how to interact with or extend it from Python. For your purposes the XML-RPC process control API should work nicely.
Try this other version
def checkPidRunning(pid):
'''Check For the existence of a unix pid.
'''
try:
os.kill(pid, 0)
except OSError:
return False
else:
return True
# Entry point
if __name__ == '__main__':
pid = str(os.getpid())
pidfile = os.path.join("/", "tmp", __program__+".pid")
if os.path.isfile(pidfile) and checkPidRunning(int(file(pidfile,'r').readlines()[0])):
print "%s already exists, exiting" % pidfile
sys.exit()
else:
file(pidfile, 'w').write(pid)
# Do some actual work here
main()
os.unlink(pidfile)
Rather than developing your own PID file solution (which has more subtleties and corner cases than you might think), have a look at supervisord -- this is a process control system that makes it easy to wrap job control and daemon behaviors around an existing Python script.
The other answers are great for things like cron jobs, but if you're running a daemon you should monitor it with something like daemontools.
ps ax | grep processName
if yor debug script in pycharm always exit
pydevd.py --multiproc --client 127.0.0.1 --port 33882 --file processName
try this:
#/usr/bin/env python
import os, sys, atexit
try:
# Set PID file
def set_pid_file():
pid = str(os.getpid())
f = open('myCode.pid', 'w')
f.write(pid)
f.close()
def goodby():
pid = str('myCode.pid')
os.remove(pid)
atexit.register(goodby)
set_pid_file()
# Place your code here
except KeyboardInterrupt:
sys.exit(0)
Here is more useful code (with checking if exactly python executes the script):
#! /usr/bin/env python
import os
from sys import exit
def checkPidRunning(pid):
global script_name
if pid<1:
print "Incorrect pid number!"
exit()
try:
os.kill(pid, 0)
except OSError:
print "Abnormal termination of previous process."
return False
else:
ps_command = "ps -o command= %s | grep -Eq 'python .*/%s'" % (pid,script_name)
process_exist = os.system(ps_command)
if process_exist == 0:
return True
else:
print "Process with pid %s is not a Python process. Continue..." % pid
return False
if __name__ == '__main__':
script_name = os.path.basename(__file__)
pid = str(os.getpid())
pidfile = os.path.join("/", "tmp/", script_name+".pid")
if os.path.isfile(pidfile):
print "Warning! Pid file %s existing. Checking for process..." % pidfile
r_pid = int(file(pidfile,'r').readlines()[0])
if checkPidRunning(r_pid):
print "Python process with pid = %s is already running. Exit!" % r_pid
exit()
else:
file(pidfile, 'w').write(pid)
else:
file(pidfile, 'w').write(pid)
# main programm
....
....
os.unlink(pidfile)
Here is string:
ps_command = "ps -o command= %s | grep -Eq 'python .*/%s'" % (pid,script_name)
returns 0 if "grep" is successful, and the process "python" is currently running with the name of your script as a parameter .
A simple example if you only are looking for a process name exist or not:
import os
def pname_exists(inp):
os.system('ps -ef > /tmp/psef')
lines=open('/tmp/psef', 'r').read().split('\n')
res=[i for i in lines if inp in i]
return True if res else False
Result:
In [21]: pname_exists('syslog')
Out[21]: True
In [22]: pname_exists('syslog_')
Out[22]: False
I was looking for an answer on this and in my case, came to mind a very easy and very good solution, in my opinion (since it's not possible to exist a false positive on this, I guess - how can the timestamp on the TXT be updated if the program doesn't do it):
--> just keep writing on a TXT the current timestamp in some time interval, depending on your needs (here each half hour was perfect).
If the timestamp on the TXT is outdated relatively to the current one when you check, then there was a problem on the program and it should be restarted or what you prefer to do.
A portable solution that relies on multiprocessing.shared_memory:
import atexit
from multiprocessing import shared_memory
_ensure_single_process_store = {}
def ensure_single_process(name: str):
if name in _ensure_single_process_store:
return
try:
shm = shared_memory.SharedMemory(name='ensure_single_process__' + name,
create=True,
size=1)
except FileExistsError:
print(f"{name} is already running!")
raise
_ensure_single_process_store[name] = shm
atexit.register(shm.unlink)
Usually you wouldn't have to use atexit, but sometimes it helps to clean up upon abnormal exit.
Consider the following example to solve your problem:
#!/usr/bin/python
# -*- coding: latin-1 -*-
import os, sys, time, signal
def termination_handler (signum,frame):
global running
global pidfile
print 'You have requested to terminate the application...'
sys.stdout.flush()
running = 0
os.unlink(pidfile)
running = 1
signal.signal(signal.SIGINT,termination_handler)
pid = str(os.getpid())
pidfile = '/tmp/'+os.path.basename(__file__).split('.')[0]+'.pid'
if os.path.isfile(pidfile):
print "%s already exists, exiting" % pidfile
sys.exit()
else:
file(pidfile, 'w').write(pid)
# Do some actual work here
while running:
time.sleep(10)
I suggest this script because it can be executed one time only.
Using bash to look for a process with the current script's name. No extra file.
import commands
import os
import time
import sys
def stop_if_already_running():
script_name = os.path.basename(__file__)
l = commands.getstatusoutput("ps aux | grep -e '%s' | grep -v grep | awk '{print $2}'| awk '{print $2}'" % script_name)
if l[1]:
sys.exit(0);
To test, add
stop_if_already_running()
print "running normally"
while True:
time.sleep(3)
This is what I use in Linux to avoid starting a script if already running:
import os
import sys
script_name = os.path.basename(__file__)
pidfile = os.path.join("/tmp", os.path.splitext(script_name)[0]) + ".pid"
def create_pidfile():
if os.path.exists(pidfile):
with open(pidfile, "r") as _file:
last_pid = int(_file.read())
# Checking if process is still running
last_process_cmdline = "/proc/%d/cmdline" % last_pid
if os.path.exists(last_process_cmdline):
with open(last_process_cmdline, "r") as _file:
cmdline = _file.read()
if script_name in cmdline:
raise Exception("Script already running...")
with open(pidfile, "w") as _file:
pid = str(os.getpid())
_file.write(pid)
def main():
"""Your application logic goes here"""
if __name__ == "__main__":
create_pidfile()
main()
This approach works good without any dependency on an external module.