SQLAchemy is never able to locate specified column in row - python

I'm new to SQLAlchemy (but not ORM's in general) and running into an issue where I literally cannot do anything useful. All I'm able to do is hard code my query, which is what I want to do.
Here is exactly what I'm attempting to do (see Python comments to see what does/doesn't work -
from sqlalchemy.orm import sessionmaker
from sqlalchemy import create_engine
from sqlalchemy.ext.declarative import declarative_base
from sqlalchemy import Column, Integer, String
from sqlalchemy import MetaData, Table
import pypyodbc
connection_string = 'mssql+pyodbc://U:P#SERVER/DB'
Base = declarative_base()
class Item(Base):
__tablename__ = 'Items'
id = Column('Id', Integer, primary_key=True)
engine = create_engine(connection_string, echo=True, module=pypyodbc)
sm = sessionmaker(engine)
session = sm()
# WORKS
for row in engine.execute('select top 1 Id from Items'):
print(row)
# DOES NOT WORK
print(session.query(Item).get(111))
The error I'm getting is sqlalchemy.exc.NoSuchColumnError: "Could not locate column in row for column 'Items.Id'".
The generated SQL is correct -
SELECT [Items].[Id] AS [Items_Id]
FROM [Items]
WHERE [Items].[Id] = 111
I know I'm pointing to the right database, because if I change __tablename to something non-existent I get an invalid object name error.
Why can't SQLAlchemy find my columns?

Related

Is there a way to use SQL Tables as classes or objects in python?

I have to tie database and programming for an assignment and I have an idea for a code but need to make sure that I can use the tables I created in mySQL as my classes or objects in Python.
Example: I use SQL to create a database of houses with specific addresses and zip codes. A client says they live in zipcode x. My program should then parse through the database and return all addresses within zipcode x. Then ideally create a table in SQL with the clients results.
Not the exact assignment but it gets the basic idea across.
You're looking for an ORM. See SQLAlchemy. Example:
from sqlalchemy import Column, String, Integer, Sequence
from sqlalchemy.ext.declarative import declarative_base
from sqlalchemy.orm import sessionmaker
create_session = sessionmaker()
Base = declarative_base()
person_autoincr_seq = Sequence('person_autoincr_seq')
class Person(Base):
__tablename__ = "person"
id = Column(
Integer,
person_autoincr_seq,
server_default=person_autoincr_seq.next_value(),
nullable = False,
primary_key = True
)
name = Column(
String,
nullable = False
)
def __init__(self, name,id=None):
if id is not None:
self.id = id
self.name = name
Using the db:
import logging as log
from contextlib import closing
engine = sqlalchemy.engine.create_engine(
"postgresql://testuser:mypassword#127.0.0.1:5432/testdb"
)
create_session.configure(bind=engine)
try:
with closing(create_session()) as db_session:
name = db_session.query(Person.name).filter_by(id=5).one()[0]
except Exception:
log.exception("Something wrong while querying db")

sqlalchemy empty schema and no tables

I am trying to use sqlalchemy via a Database first approach and generate the models for the existing database structure. The db is a standard SQLServer(express).
I can connect to my database and query it via the following
from sqlalchemy import create_engine, MetaData, Table
from sqlalchemy.orm import scoped_session, sessionmaker
from sqlalchemy.ext.declarative import declarative_base
__connectionString = "DSN=databaseDSN;Trusted_Connection=yes"
db_engine = create_engine('mssql+pyodbc:///?odbc_connect=%s' % __connectionString, echo=True)
db_session = scoped_session(sessionmaker(bind=db_engine))
result = db_session.execute("SELECT * FROM debug.BasicTable")
for row in result.fetchmany(10):
print(row)
When I try to reflect the database structure below I am unable to see any of the actual tables and the following raises a NoSuchTableError
myTable= Table('debug.BasicTable', meta, autoload=True, autoload_with=db_engine)
from a common tutorial http://pythoncentral.io/sqlalchemy-faqs/
I should be able to reflect the table objects
Base = declarative_base()
Base.metadata.reflect(db_engine)
meta = MetaData()
meta.reflect(bind=db_engine)
However there are no table objects in meta.tables at all.
This is because debug.BasicTable is most likley not the name of your table. The name of your table is BasicTable and debug is its schema. So:
Table('BasicTable', meta, schema="debug", autoload=True, autoload_with=db_engine)

How to use postgres numeric range with SQLAlchemy

I can't happen to find much on using Postgres range types in SQLAlchemy other than this. Does anyone know how to insert new column values into a numrange column? Does anyone have some code snippets or more documentation than the one I already found?
This has been added to the official documentation: https://bitbucket.org/zzzeek/sqlalchemy/issue/3046/postgresql-range-types-need-better
Had to dig around for this, but when in doubt, check the tests! The SQLAlchemy tests for the range types use the underlying psycopg2 types.
from psycopg2.extras import NumericRange
from sqlalchemy import create_engine, Column, Integer
from sqlalchemy.dialects.postgresql import INT4RANGE
from sqlalchemy.ext.declarative import declarative_base
from sqlalchemy.orm import sessionmaker
engine = create_engine('postgresql:///example', echo=True)
Session = sessionmaker(bind=engine)
session = Session()
Base = declarative_base(bind=engine)
class Example(Base):
__tablename__ = 'example'
id = Column(Integer, primary_key=True)
window = Column(INT4RANGE, nullable=False)
Base.metadata.create_all()
session.add(Example(window=NumericRange(2, 6)))
session.add(Example(window=NumericRange(4, 8)))
session.commit()

SQLAlchemy - create table template

I am just starting with SQLAlchemy and I have been wondering... I am going to have a lot of tables in my model. I would like to have own file for each table I will have in my model.
I am currently using following code:
from sqlalchemy import MetaData
from sqlalchemy.orm import scoped_session, sessionmaker
from sqlalchemy.ext.declarative import declarative_base
from sqlalchemy.dialects import postgresql
import sqlalchemy as sa
__all__ = ['Session', 'engine', 'metadata']
# SQLAlchemy database engine. Updated by model.init_model()
engine = None
# SQLAlchemy session manager. Updated by model.init_model()
Session = scoped_session(sessionmaker())
# Global metadata. If you have multiple databases with overlapping table
# names, you'll need a metadata for each database
metadata = MetaData()
# declarative table definitions
Base = declarative_base()
Base.metadata = metadata
schema = 'srbam_dev'
in meta.py
Following in _init_.py
"""The application's model objects"""
import sqlalchemy as sa
from sqlalchemy import orm
from models import meta
from models.filers import Filer
from models.vfilers import Vfiler
from models.filer_options import FilerOption
def init_models(engine):
"""Call me before using any of the tables or classes in the model"""
## Reflected tables must be defined and mapped here
#global reflected_table
#reflected_table = sa.Table("Reflected", meta.metadata, autoload=True,
# autoload_with=engine)
#orm.mapper(Reflected, reflected_table)
#
meta.engine = sa.create_engine(engine)
meta.Session.configure(bind=meta.engine)
class Basic_Table(object):
id = sa.Column(
postgresql.UUID(),
nullable=False,
primary_key=True
)
created = sa.Column(
sa.types.DateTime(True),
nullable=False
)
modified = sa.Column(
sa.types.DateTime(True),
nullable=False
)
And then following in all of my models
from models.meta import Base
from models.meta import Basic_Table
from models.meta import schema
import sqlalchemy as sa
from sqlalchemy.dialects import postgresql
class Filer(Base,Basic_Table):
This works just fine, as long as I do not start to use some Foreign Keys on tables, once I use Foreign Key says
sqlalchemy.exc.NoReferencedTableError: Foreign key associated with column 't_vfilers.filer_id' could not find table 't_filers' with which to generate a foreign key to target column 'id'
I tried to define id key directly in Filer class (and remove Basic_Table from declaration), however this does not solve the issue.
My code for creating the database looks like this
#!/usr/bin/python
import ConfigParser
from sqlalchemy.engine.url import URL
from models import *
config = ConfigParser.RawConfigParser()
config.read('conf/core.conf')
db_url = URL(
'postgresql+psycopg2',
config.get('database','username'),
config.get('database','password'),
config.get('database','host'),
config.get('database','port'),
config.get('database','dbname')
)
init_models(db_url)
meta.Base.metadata.drop_all(bind=meta.engine)
meta.Base.metadata.create_all(bind=meta.engine)
Does anyone have an idea how to fix this issue?
Marek,do one thing try defining the foreign key along with the schema name i.e 'test.t_vfilers.filer_id'(here 'test' is the schema name),this will solve the problem.
Have you remembered to import the different modules containing the models.
In my init.py I have at the bottom a ton of:
from comparty3.model.users import User, UserGroup, Permission
from comparty3.model.pages import PageGroup, Page
etc...
If that's not the issue then I'm not sure; however have you tried to change:
metadata = MetaData()
# declarative table definitions
Base = declarative_base()
Base.metadata = metadata
to:
# declarative table definitions
Base = declarative_base()
metadata = Base.metadata
I'm guessing here, but it may be that declarative_base() creates a special metadata object.
This is how it is defined in my pylons projects (were I'm guessing your code is from too).

In Sqlalchemy, if i add an object using session.add() and flush it, session.query() does not give that object, why?

While using SQLAlchemy, i add a object to a session using session.add(objname), then either explicitly flush it using session.flush or enable autoflush=True while creating the engine itself.
Now in the session, if want to return that object via session.query(classname).all(), i cannot retrieve it.
Why is that so? or is there a way in which query() can also retrieve flushed objects.
I can't reproduce your issue. Please provide sample code that I can run to reproduce it.
Here's code that does what you describe, but behaves as one would expect:
from sqlalchemy import Column, Integer, Unicode, create_engine
from sqlalchemy.orm import create_session
from sqlalchemy.ext.declarative import declarative_base
engine = create_engine('sqlite://')
Base = declarative_base(bind=engine)
class User(Base):
__tablename__ = 'users'
id = Column(Integer, primary_key=True)
name = Column(Unicode(60))
Base.metadata.create_all()
After that setup, Add a new user:
s = create_session(autocommit=False, autoflush=False)
u = User()
u.name = u'Cheezo'
s.add(u)
s.flush()
Then query it back:
>>> u2 = s.query(User).first()
>>> print u2.name
Cheezo
>>> u2 is u
True

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