I have found the boundaries of an image like this:
Now I need to fill inside of the region (it is a breast tissue). Is there any functions in opencv or other modules in python like skimage through which I can do that?? something like maybe imfill in MATLAB.
A simple floodfill will not work in this case. The image you have provided looks like one single contour but it has multiple holes in it. Before you can apply flood fill, I suggest you fill the holes in the line using spline curves. Once done you can apply floodfill.
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I have a set of images that look like this:
Using python need a way to find a contour around the yellow shape that ignores the isolated points and is not too complex. Something looking a bit like this :
I tried some methods such as the find_contours function from skimage,which gives this after keeping only the biggest contour:
which is not what I am looking for. A also tried active contour (snake) which had the problem of paying too much attention to isolated pixels. Is there a particular method that would help me in this situation ?
Thank you
Assuming the yellow blob is slightly different across your images, I recommend you look into either using Morphological Operations, or using Contour Approximation.
I've never used scikit-image, but it appears to have Morphological functionalities included.
You can take a look at this OpenCV tutorial for a quick guideline of the different operations.
But I think all you need is to use the "Opening" operation to preprocess your yellow shape; making it smoother and removing the random speckles.
Another approach is by approximating that contour you've extracted to make it smoother. For scikit-image, that is the measure.approximate_polygon function. Also another OpenCV tutorial for reference on how Contour Approximation works (the same algorithm as with scikit-image).
I'm currently working with masks of lung CTs.
The example shown below is an example of a mask. I would like to remove the entry in the image, a kind of an edge hole. How can I do this using Python/OpenCV or something else?
I need your advice, guys! So I am trying to create a mask for a football (i.e. soccer) pitch, and if I only use filtering by the most common hue/saturation/value values, I get the following image
As you can see, the desired part is inside the grey boundary I drawn and there is a lot of noise here - trees, lines, external objects, and of course I would like to get rid of it. The desired outcome is something similar to this:
I thought about an algorithm that would transform the first image into another by analyzing each pixel's surrounding and color it white if more than threshold% of pixels into a (x, x) square is white, otherwise black.
Do you know if there is an implementation on openCV or similar libraries for this or I should build it from scratch?
Also, maybe you can propose other way to deal with the noise and external objects? I already tried the morphological transform and blurring techniques, but either I don't do it right or it doesn't work well for my problem.
Thank you in advance for your advice!
I actually found an easy implementation of the algo I proposed - I simply use cv2.blur on the image and then filter with cv2.inRange, so it does exactly what I wanted it to do.
I'm making some photo-editing tools in python using PIL (Python Imaging Library), and I was trying to make a program which converts a photo to its 'painted' version.
I've managed to make a program which converts a photo into its distinct colours, but the problem is that the algorithm I'm using is operating on every pixel, meaning that the resulting image has very jagged differences between colours.
Ideally, I'd like to smoothen out these edges, but I don't know how!
I've checked out this site for some help, but the method there produces quite different results to what I need.
My Starting Image:
My Image with Distinct Colours:
I would like to smoothen the edges in the image above.
Results of using the method which doesn't quite work:
As you can see, using the technique doesn't smoothen the edges into natural-looking curves; instead it creates jagged edges.
I know I should provide sample output, but suprisingly, I haven't actually got it, so I'll describe it as best as I can. Simply put, I want to smoothen the edges between the different colours.
I've seen something called a Gaussian blur, but I'm not quite sure as to how to apply it here as the answers I've seen always mention some sort of threshold, and are usually to do with binary images, so I don't think it can apply here.
Edge enhancement does the opposite of edge smoothing, so this is certainly not the tool you should use.
Unfortunately, there is little that you can do because edge smoothing will indeed smoothen the jaggies, but it will also destroy the true edges, resulting in a blurred image. Edge-preserving smoothing is also a dead-end.
You should have a look at the methods to extract the "cartoon part" of an image. There is a lot of literature on this topic, though often pretty sophisticated.
You can enhance the quality of your "Image with Distinct Colours" by applying a median filter with a radius of 2:
If you want to get "comic-like" dark edges, you can calculate the edges of the original image using a sobel filter, convert the edge map to grayscale, then multiply the resulting edge map with 2, inverse the map and add each non-white pixel of the edge map to the original image. This will result in:
This is of course only a starting point as the result leaves much to be desired, but it should give you a good idea about the basic concept.
I have image with some object at not solid background. I want to extract this objects like in gimp using "fuzzy select". This can be an example:
http://img249.imageshack.us/gal.php?g=25750902.png
Question is what is the best way to do it using python/PIL...
I suppose you would need some flood-fill algorithm (such as breadth-first-traversal) in which you stop exploring pixels with different color than black.
Wikipedia has an excellent explanation with animations and pseudo-code
http://en.wikipedia.org/wiki/Flood_fill
And besides, if you want to add feature like "tolerance" in Photoshop, you should apply this method Connected-component_labeling when getting connected vertex on your graph while doing flood fill
As of today, skimage 0.19 has a flood fill algorithm: link