unable to install package using PIP for python - python

I am having issues installing any package on mac os. I have tried updating pip , installed python. uninstalled python and bunch of other stuff that I have tried.
Ran the command pip3 install indicoio
error as below kindly share your thoughts on how I can overcome this error
Collecting indicoio
Using cached IndicoIo-1.0.4.tar.gz
Complete output from command python setup.py egg_info:
warning: no files found matching '*.sh'
no previously-included directories found matching 'docs/_static'
warning: no previously-included files found matching '.coveragerc'
warning: no previously-included files found matching '.editorconfig'
warning: no previously-included files found matching '.landscape.yaml'
warning: no previously-included files found matching 'appveyor.yml'
warning: no previously-included files found matching 'build_children.sh'
warning: no previously-included files found matching 'tox.ini'
warning: no previously-included files matching '.git*' found anywhere in distribution
warning: no previously-included files matching '*.pyc' found anywhere in distribution
warning: no previously-included files matching '*.so' found anywhere in distribution
Traceback (most recent call last):
File "/usr/local/lib/python3.5/site-packages/setuptools/sandbox.py", line 156, in save_modules
yield saved
File "/usr/local/lib/python3.5/site-packages/setuptools/sandbox.py", line 197, in setup_context
yield
File "/usr/local/lib/python3.5/site-packages/setuptools/sandbox.py", line 246, in run_setup
DirectorySandbox(setup_dir).run(runner)
File "/usr/local/lib/python3.5/site-packages/setuptools/sandbox.py", line 276, in run
return func()
File "/usr/local/lib/python3.5/site-packages/setuptools/sandbox.py", line 245, in runner
_execfile(setup_script, ns)
File "/usr/local/lib/python3.5/site-packages/setuptools/sandbox.py", line 47, in _execfile
exec(code, globals, locals)
File "/tmp/easy_install-mq2t7d4s/Pillow-3.4.2/setup.py", line 753, in <module>
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/core.py", line 148, in setup
dist.run_commands()
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/dist.py", line 955, in run_commands
self.run_command(cmd)
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/usr/local/lib/python3.5/site-packages/setuptools/command/bdist_egg.py", line 161, in run
cmd = self.call_command('install_lib', warn_dir=0)
File "/usr/local/lib/python3.5/site-packages/setuptools/command/bdist_egg.py", line 147, in call_command
self.run_command(cmdname)
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/usr/local/lib/python3.5/site-packages/setuptools/command/install_lib.py", line 11, in run
self.build()
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/command/install_lib.py", line 107, in build
self.run_command('build_ext')
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/command/build_ext.py", line 338, in run
self.build_extensions()
File "/tmp/easy_install-mq2t7d4s/Pillow-3.4.2/setup.py", line 521, in build_extensions
ValueError: jpeg is required unless explicitly disabled using --disable-jpeg, aborting
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/private/tmp/pip-build-669f5s37/indicoio/setup.py", line 52, in <module>
"futures >= 3.0.0"
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/core.py", line 108, in setup
_setup_distribution = dist = klass(attrs)
File "/usr/local/lib/python3.5/site-packages/setuptools/dist.py", line 348, in __init__
self.fetch_build_eggs(attrs['setup_requires'])
File "/usr/local/lib/python3.5/site-packages/setuptools/dist.py", line 394, in fetch_build_eggs
replace_conflicting=True,
File "/usr/local/lib/python3.5/site-packages/pkg_resources/__init__.py", line 826, in resolve
dist = best[req.key] = env.best_match(req, ws, installer)
File "/usr/local/lib/python3.5/site-packages/pkg_resources/__init__.py", line 1098, in best_match
return self.obtain(req, installer)
File "/usr/local/lib/python3.5/site-packages/pkg_resources/__init__.py", line 1110, in obtain
return installer(requirement)
File "/usr/local/lib/python3.5/site-packages/setuptools/dist.py", line 461, in fetch_build_egg
return cmd.easy_install(req)
File "/usr/local/lib/python3.5/site-packages/setuptools/command/easy_install.py", line 664, in easy_install
return self.install_item(spec, dist.location, tmpdir, deps)
File "/usr/local/lib/python3.5/site-packages/setuptools/command/easy_install.py", line 694, in install_item
dists = self.install_eggs(spec, download, tmpdir)
File "/usr/local/lib/python3.5/site-packages/setuptools/command/easy_install.py", line 875, in install_eggs
return self.build_and_install(setup_script, setup_base)
File "/usr/local/lib/python3.5/site-packages/setuptools/command/easy_install.py", line 1114, in build_and_install
self.run_setup(setup_script, setup_base, args)
File "/usr/local/lib/python3.5/site-packages/setuptools/command/easy_install.py", line 1100, in run_setup
run_setup(setup_script, args)
File "/usr/local/lib/python3.5/site-packages/setuptools/sandbox.py", line 249, in run_setup
raise
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/contextlib.py", line 77, in __exit__
self.gen.throw(type, value, traceback)
File "/usr/local/lib/python3.5/site-packages/setuptools/sandbox.py", line 197, in setup_context
yield
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/contextlib.py", line 77, in __exit__
self.gen.throw(type, value, traceback)
File "/usr/local/lib/python3.5/site-packages/setuptools/sandbox.py", line 168, in save_modules
saved_exc.resume()
File "/usr/local/lib/python3.5/site-packages/setuptools/sandbox.py", line 143, in resume
six.reraise(type, exc, self._tb)
File "/usr/local/lib/python3.5/site-packages/pkg_resources/_vendor/six.py", line 685, in reraise
raise value.with_traceback(tb)
File "/usr/local/lib/python3.5/site-packages/setuptools/sandbox.py", line 156, in save_modules
yield saved
File "/usr/local/lib/python3.5/site-packages/setuptools/sandbox.py", line 197, in setup_context
yield
File "/usr/local/lib/python3.5/site-packages/setuptools/sandbox.py", line 246, in run_setup
DirectorySandbox(setup_dir).run(runner)
File "/usr/local/lib/python3.5/site-packages/setuptools/sandbox.py", line 276, in run
return func()
File "/usr/local/lib/python3.5/site-packages/setuptools/sandbox.py", line 245, in runner
_execfile(setup_script, ns)
File "/usr/local/lib/python3.5/site-packages/setuptools/sandbox.py", line 47, in _execfile
exec(code, globals, locals)
File "/tmp/easy_install-mq2t7d4s/Pillow-3.4.2/setup.py", line 753, in <module>
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/core.py", line 148, in setup
dist.run_commands()
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/dist.py", line 955, in run_commands
self.run_command(cmd)
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/usr/local/lib/python3.5/site-packages/setuptools/command/bdist_egg.py", line 161, in run
cmd = self.call_command('install_lib', warn_dir=0)
File "/usr/local/lib/python3.5/site-packages/setuptools/command/bdist_egg.py", line 147, in call_command
self.run_command(cmdname)
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/usr/local/lib/python3.5/site-packages/setuptools/command/install_lib.py", line 11, in run
self.build()
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/command/install_lib.py", line 107, in build
self.run_command('build_ext')
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/usr/local/Cellar/python3/3.5.2_3/Frameworks/Python.framework/Versions/3.5/lib/python3.5/distutils/command/build_ext.py", line 338, in run
self.build_extensions()
File "/tmp/easy_install-mq2t7d4s/Pillow-3.4.2/setup.py", line 521, in build_extensions
ValueError: jpeg is required unless explicitly disabled using --disable-jpeg, aborting
----------------------------------------
Command "python setup.py egg_info" failed with error code 1 in /private/tmp/pip-build-669f5s37/indicoio/

Try using:
sudo python setup.py install
In the directory that you installed the folder. If that doesn't work try
python setup.py --help-command
Above is the code that showed me the other commands on Windows I am not sure what the equivalent is on Mac. But I found specific installation functions such as install_lib and install_scripts.

Related

Install Scipy 1.0.0: AssertionError

I am trying to install scipy 1.0.0 in a conda env for another software called GATK.
I installed python 3.6.10 and numpy 1.17.5, which are said to be compatible with scipy 1.0.0 (both in the yml file provided by GATK)
However, when I tried installing via python setup.py build, it returns error message as below. I searched by seems like others are mostly struggling with scipy 1.1.0 or some other errors.
Really appreciate any help!
Thanks!
f2py: build/src.linux-x86_64-3.6/scipy/linalg/flapack.pyf
Reading fortran codes...
Reading file 'build/src.linux-x86_64-3.6/scipy/linalg/flapack.pyf' (format:free)
Traceback (most recent call last):
File "setup.py", line 418, in <module>
setup_package()
File "setup.py", line 414, in setup_package
setup(**metadata)
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/site-packages/numpy/distutils/core.py", line 171, in setup
return old_setup(**new_attr)
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/site-packages/setuptools/__init__.py", line 153, in setup
return distutils.core.setup(**attrs)
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/distutils/core.py", line 148, in setup
dist.run_commands()
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/distutils/dist.py", line 955, in run_commands
self.run_command(cmd)
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/site-packages/numpy/distutils/command/build.py", line 47, in run
old_build.run(self)
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/distutils/command/build.py", line 135, in run
self.run_command(cmd_name)
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/site-packages/numpy/distutils/command/build_src.py", line 142, in run
self.build_sources()
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/site-packages/numpy/distutils/command/build_src.py", line 159, in build_sources
self.build_extension_sources(ext)
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/site-packages/numpy/distutils/command/build_src.py", line 319, in build_extension_sources
sources = self.f2py_sources(sources, ext)
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/site-packages/numpy/distutils/command/build_src.py", line 535, in f2py_sources
+ ['--build-dir', target_dir, source])
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/site-packages/numpy/f2py/f2py2e.py", line 425, in run_main
postlist = callcrackfortran(files, options)
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/site-packages/numpy/f2py/f2py2e.py", line 330, in callcrackfortran
postlist = crackfortran.crackfortran(files)
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/site-packages/numpy/f2py/crackfortran.py", line 3251, in crackfortran
readfortrancode(files, crackline)
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/site-packages/numpy/f2py/crackfortran.py", line 501, in readfortrancode
dowithline(finalline)
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/site-packages/numpy/f2py/crackfortran.py", line 796, in crackline
analyzeline(m, pat[1], line)
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/site-packages/numpy/f2py/crackfortran.py", line 1098, in analyzeline
last_name = updatevars(typespec, selector, attr, edecl)
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/site-packages/numpy/f2py/crackfortran.py", line 1542, in updatevars
attrspec = [x.strip() for x in markoutercomma(attrspec).split('#,#')]
File "/home/joyzheng/.conda/envs/gatk4.3/lib/python3.6/site-packages/numpy/f2py/crackfortran.py", line 833, in markoutercomma
assert not f, repr((f, line, l))
AssertionError: (-1, 'intent(in))', 'intent(in))')```
- List item

Python pip 8.1.1 upgrade failing

I am currently on pip version 8.1.1 and trying to upgrade a package:
root#NetworkAutomation-1:~# pip3 install -U netmiko
But I am receiving this error:
Collecting netmiko
Using cached https://files.pythonhosted.org/packages/26/05/dbe9c97c39f126e7b8dc70cf897dcad557dbd579703f2e3acfd3606d0cee/netmiko-2.4.2-py2.py3-none-any.whl
Collecting paramiko>=2.4.3 (from netmiko)
Using cached https://files.pythonhosted.org/packages/06/1e/1e08baaaf6c3d3df1459fd85f0e7d2d6aa916f33958f151ee1ecc9800971/paramiko-2.7.1-py2.py3-none-any.whl
Collecting setuptools>=38.4.0 (from netmiko)
Using cached https://files.pythonhosted.org/packages/f9/d3/955738b20d3832dfa3cd3d9b07e29a8162edb480bf988332f5e6e48ca444/setuptools-44.0.0-py2.py3-none-any.whl
Collecting textfsm (from netmiko)
Using cached https://files.pythonhosted.org/packages/bd/27/0b149b6da3e47cc8daebace6920093114392171a8f5c24f1f2ad9a9e9c4d/textfsm-1.1.0-py2.py3-none-any.whl
Collecting scp>=0.13.2 (from netmiko)
Using cached https://files.pythonhosted.org/packages/4d/7a/3d76dc5ad8deea79642f50a572e1c057cb27e8b427f83781a2c05ce4e5b6/scp-0.13.2-py2.py3-none-any.whl
Collecting pyserial (from netmiko)
Using cached https://files.pythonhosted.org/packages/0d/e4/2a744dd9e3be04a0c0907414e2a01a7c88bb3915cbe3c8cc06e209f59c30/pyserial-3.4-py2.py3-none-any.whl
Collecting cryptography>=2.5 (from paramiko>=2.4.3->netmiko)
Using cached https://files.pythonhosted.org/packages/be/60/da377e1bed002716fb2d5d1d1cab720f298cb33ecff7bf7adea72788e4e4/cryptography-2.8.tar.gz
Collecting pynacl>=1.0.1 (from paramiko>=2.4.3->netmiko)
Using cached https://files.pythonhosted.org/packages/61/ab/2ac6dea8489fa713e2b4c6c5b549cc962dd4a842b5998d9e80cf8440b7cd/PyNaCl-1.3.0.tar.gz
Complete output from command python setup.py egg_info:
c/_cffi_backend.c:2:20: fatal error: Python.h: No such file or directory
compilation terminated.
Traceback (most recent call last):
File "/usr/lib/python3.5/distutils/unixccompiler.py", line 118, in _compile
extra_postargs)
File "/usr/lib/python3.5/distutils/ccompiler.py", line 909, in spawn
spawn(cmd, dry_run=self.dry_run)
File "/usr/lib/python3.5/distutils/spawn.py", line 36, in spawn
_spawn_posix(cmd, search_path, dry_run=dry_run)
File "/usr/lib/python3.5/distutils/spawn.py", line 159, in _spawn_posix
% (cmd, exit_status))
distutils.errors.DistutilsExecError: command 'x86_64-linux-gnu-gcc' failed with exit status 1
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/lib/python3.5/distutils/core.py", line 148, in setup
dist.run_commands()
File "/usr/lib/python3.5/distutils/dist.py", line 955, in run_commands
self.run_command(cmd)
File "/usr/lib/python3.5/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/usr/lib/python3/dist-packages/setuptools/command/bdist_egg.py", line 161, in run
cmd = self.call_command('install_lib', warn_dir=0)
File "/usr/lib/python3/dist-packages/setuptools/command/bdist_egg.py", line 147, in call_command
self.run_command(cmdname)
File "/usr/lib/python3.5/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.5/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/usr/lib/python3/dist-packages/setuptools/command/install_lib.py", line 23, in run
self.build()
File "/usr/lib/python3.5/distutils/command/install_lib.py", line 109, in build
self.run_command('build_ext')
File "/usr/lib/python3.5/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.5/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/usr/lib/python3/dist-packages/setuptools/command/build_ext.py", line 49, in run
_build_ext.run(self)
File "/usr/lib/python3.5/distutils/command/build_ext.py", line 338, in run
self.build_extensions()
File "/usr/lib/python3.5/distutils/command/build_ext.py", line 447, in build_extensions
self._build_extensions_serial()
File "/usr/lib/python3.5/distutils/command/build_ext.py", line 472, in _build_extensions_serial
self.build_extension(ext)
File "/usr/lib/python3/dist-packages/setuptools/command/build_ext.py", line 174, in build_extension
_build_ext.build_extension(self, ext)
File "/usr/lib/python3.5/distutils/command/build_ext.py", line 532, in build_extension
depends=ext.depends)
File "/usr/lib/python3.5/distutils/ccompiler.py", line 574, in compile
self._compile(obj, src, ext, cc_args, extra_postargs, pp_opts)
File "/usr/lib/python3.5/distutils/unixccompiler.py", line 120, in _compile
raise CompileError(msg)
distutils.errors.CompileError: command 'x86_64-linux-gnu-gcc' failed with exit status 1
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 154, in save_modules
yield saved
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 195, in setup_context
yield
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 243, in run_setup
DirectorySandbox(setup_dir).run(runner)
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 273, in run
return func()
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 242, in runner
_execfile(setup_script, ns)
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 46, in _execfile
exec(code, globals, locals)
File "/tmp/easy_install-473w7z52/cffi-1.13.2/setup.py", line 248, in <module>
"Programming Language :: Python :: Implementation :: PyPy",
File "/usr/lib/python3.5/distutils/core.py", line 163, in setup
raise SystemExit("error: " + str(msg))
SystemExit: error: command 'x86_64-linux-gnu-gcc' failed with exit status 1
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 1087, in run_setup
run_setup(setup_script, args)
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 246, in run_setup
raise
File "/usr/lib/python3.5/contextlib.py", line 77, in __exit__
self.gen.throw(type, value, traceback)
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 195, in setup_context
yield
File "/usr/lib/python3.5/contextlib.py", line 77, in __exit__
self.gen.throw(type, value, traceback)
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 166, in save_modules
saved_exc.resume()
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 141, in resume
six.reraise(type, exc, self._tb)
File "/usr/lib/python3/dist-packages/pkg_resources/_vendor/six.py", line 685, in reraise
raise value.with_traceback(tb)
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 154, in save_modules
yield saved
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 195, in setup_context
yield
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 243, in run_setup
DirectorySandbox(setup_dir).run(runner)
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 273, in run
return func()
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 242, in runner
_execfile(setup_script, ns)
File "/usr/lib/python3/dist-packages/setuptools/sandbox.py", line 46, in _execfile
exec(code, globals, locals)
File "/tmp/easy_install-473w7z52/cffi-1.13.2/setup.py", line 248, in <module>
"Programming Language :: Python :: Implementation :: PyPy",
File "/usr/lib/python3.5/distutils/core.py", line 163, in setup
raise SystemExit("error: " + str(msg))
SystemExit: error: command 'x86_64-linux-gnu-gcc' failed with exit status 1
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/tmp/pip-build-d9hokmzc/pynacl/setup.py", line 255, in <module>
"Programming Language :: Python :: 3.7",
File "/usr/lib/python3.5/distutils/core.py", line 108, in setup
_setup_distribution = dist = klass(attrs)
File "/usr/lib/python3/dist-packages/setuptools/dist.py", line 269, in __init__
self.fetch_build_eggs(attrs['setup_requires'])
File "/usr/lib/python3/dist-packages/setuptools/dist.py", line 313, in fetch_build_eggs
replace_conflicting=True,
File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 826, in resolve
dist = best[req.key] = env.best_match(req, ws, installer)
File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 1092, in best_match
return self.obtain(req, installer)
File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 1104, in obtain
return installer(requirement)
File "/usr/lib/python3/dist-packages/setuptools/dist.py", line 380, in fetch_build_egg
return cmd.easy_install(req)
File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 663, in easy_install
return self.install_item(spec, dist.location, tmpdir, deps)
File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 693, in install_item
dists = self.install_eggs(spec, download, tmpdir)
File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 873, in install_eggs
return self.build_and_install(setup_script, setup_base)
File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 1101, in build_and_install
self.run_setup(setup_script, setup_base, args)
File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 1089, in run_setup
raise DistutilsError("Setup script exited with %s" % (v.args[0],))
distutils.errors.DistutilsError: Setup script exited with error: command 'x86_64-linux-gnu-gcc' failed with exit status 1
----------------------------------------
Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-build-d9hokmzc/pynacl/
You are using pip version 8.1.1, however version 19.3.1 is available.
You should consider upgrading via the 'pip install --upgrade pip' command.
root#NetworkAutomation-1:~#
it seems like your gcc is not working not configured correctly.
command 'x86_64-linux-gnu-gcc' failed with exit status 1
Please make sure that your gcc is up to date. If this is not working out try to run pip in verbose mode with the --verbose flag. May you can figure out the error in that way otherwise you need to figure out what does the gcc error causes.
You output clearly says:
c/_cffi_backend.c:2:20: fatal error: Python.h: No such file or directory
You have to do this:
sudo apt-get install python-dev # for python2.x installs
sudo apt-get install python3-dev # for python3.x installs
or refer to this link for other OS beside Ubuntu:
fatal error: Python.h: No such file or directory

How I make pip see libgit2 binary while installing pygit2 in windows?

I'm trying to install pygit2 using pip python script, but it always fails with this message
error: Unable to find vcvarsall.bat
I don't have Visual Studio installed, so I tried to compile libgit2 using MinGW and it worked. but pip still cant figure that libgit2 is installed.
What am I supposed to do ?
EDIT
I installed Visual Studio express 2010 and run the command again, this time the error different :
Downloading/unpacking pygit2
Running setup.py (path:C:\Users\One\AppData\Local\Temp\pip_build_One\pygit2\setup.py) egg_info for
building 'pygit2_cffi_7cfafa3dx5470904' extension
Traceback (most recent call last):
File "<string>", line 17, in <module>
File "C:\Users\One\AppData\Local\Temp\pip_build_One\pygit2\setup.py", line 197, in <module>
cmdclass=cmdclass)
File "C:\Python34\lib\distutils\core.py", line 148, in setup
dist.run_commands()
File "C:\Python34\lib\distutils\dist.py", line 955, in run_commands
self.run_command(cmd)
File "C:\Python34\lib\distutils\dist.py", line 974, in run_command
cmd_obj.run()
File "<string>", line 15, in replacement_run
File "C:\Python34\lib\site-packages\setuptools\command\egg_info.py", line 186, in find_sources
mm.run()
File "C:\Python34\lib\site-packages\setuptools\command\egg_info.py", line 246, in run
self.add_defaults()
File "C:\Python34\lib\site-packages\setuptools\command\egg_info.py", line 282, in add_defaults
sdist.add_defaults(self)
File "C:\Python34\lib\site-packages\setuptools\command\sdist.py", line 161, in add_defaults
build_py = self.get_finalized_command('build_py')
File "C:\Python34\lib\distutils\cmd.py", line 299, in get_finalized_command
cmd_obj.ensure_finalized()
File "C:\Python34\lib\distutils\cmd.py", line 107, in ensure_finalized
self.finalize_options()
File "C:\Python34\lib\site-packages\setuptools\command\build_py.py", line 26, in finalize_opti
_build_py.finalize_options(self)
File "C:\Python34\lib\distutils\command\build_py.py", line 45, in finalize_options
('force', 'force'))
File "C:\Python34\lib\distutils\cmd.py", line 287, in set_undefined_options
src_cmd_obj.ensure_finalized()
File "C:\Python34\lib\distutils\cmd.py", line 107, in ensure_finalized
self.finalize_options()
File "C:\Users\One\AppData\Local\Temp\pip_build_One\pygit2\setup.py", line 103, in finalize_op
ffi, C = get_ffi()
File "pygit2\_utils.py", line 101, in get_ffi
include_dirs=[libgit2_include], library_dirs=[libgit2_lib])
File "C:\Python34\lib\site-packages\cffi\api.py", line 373, in verify
lib = self.verifier.load_library()
File "C:\Python34\lib\site-packages\cffi\verifier.py", line 96, in load_library
self._compile_module()
File "C:\Python34\lib\site-packages\cffi\verifier.py", line 192, in _compile_module
outputfilename = ffiplatform.compile(tmpdir, self.get_extension())
File "C:\Python34\lib\site-packages\cffi\ffiplatform.py", line 38, in compile
outputfilename = _build(tmpdir, ext)
File "C:\Python34\lib\site-packages\cffi\ffiplatform.py", line 62, in _build
dist.run_command('build_ext')
File "C:\Python34\lib\distutils\dist.py", line 974, in run_command
cmd_obj.run()
File "C:\Python34\lib\site-packages\setuptools\command\build_ext.py", line 52, in run
_build_ext.run(self)
File "C:\Python34\lib\distutils\command\build_ext.py", line 339, in run
self.build_extensions()
File "C:\Python34\lib\distutils\command\build_ext.py", line 448, in build_extensions
self.build_extension(ext)
File "C:\Python34\lib\site-packages\setuptools\command\build_ext.py", line 186, in build_exten
_build_ext.build_extension(self,ext)
File "C:\Python34\lib\distutils\command\build_ext.py", line 503, in build_extension
depends=ext.depends)
File "C:\Python34\lib\distutils\msvc9compiler.py", line 460, in compile
self.initialize()
File "C:\Python34\lib\distutils\msvc9compiler.py", line 371, in initialize
vc_env = query_vcvarsall(VERSION, plat_spec)
File "C:\Python34\lib\distutils\msvc9compiler.py", line 287, in query_vcvarsall
raise ValueError(str(list(result.keys())))
ValueError: ['path']
Complete output from command python setup.py egg_info:
running egg_info
creating pip-egg-info\pygit2.egg-info
writing top-level names to pip-egg-info\pygit2.egg-info\top_level.txt
writing pip-egg-info\pygit2.egg-info\PKG-INFO
writing requirements to pip-egg-info\pygit2.egg-info\requires.txt
writing dependency_links to pip-egg-info\pygit2.egg-info\dependency_links.txt
writing manifest file 'pip-egg-info\pygit2.egg-info\SOURCES.txt'
warning: manifest_maker: standard file '-c' not found
running build_ext
building 'pygit2_cffi_7cfafa3dx5470904' extension
Traceback (most recent call last):
File "<string>", line 17, in <module>
File "C:\Users\One\AppData\Local\Temp\pip_build_One\pygit2\setup.py", line 197, in <module>
cmdclass=cmdclass)
File "C:\Python34\lib\distutils\core.py", line 148, in setup
dist.run_commands()
File "C:\Python34\lib\distutils\dist.py", line 955, in run_commands
self.run_command(cmd)
File "C:\Python34\lib\distutils\dist.py", line 974, in run_command
cmd_obj.run()
File "<string>", line 15, in replacement_run
File "C:\Python34\lib\site-packages\setuptools\command\egg_info.py", line 186, in find_sources
mm.run()
File "C:\Python34\lib\site-packages\setuptools\command\egg_info.py", line 246, in run
self.add_defaults()
File "C:\Python34\lib\site-packages\setuptools\command\egg_info.py", line 282, in add_defaults
sdist.add_defaults(self)
File "C:\Python34\lib\site-packages\setuptools\command\sdist.py", line 161, in add_defaults
build_py = self.get_finalized_command('build_py')
File "C:\Python34\lib\distutils\cmd.py", line 299, in get_finalized_command
cmd_obj.ensure_finalized()
File "C:\Python34\lib\distutils\cmd.py", line 107, in ensure_finalized
self.finalize_options()
File "C:\Python34\lib\site-packages\setuptools\command\build_py.py", line 26, in finalize_options
_build_py.finalize_options(self)
File "C:\Python34\lib\distutils\command\build_py.py", line 45, in finalize_options
('force', 'force'))
File "C:\Python34\lib\distutils\cmd.py", line 287, in set_undefined_options
src_cmd_obj.ensure_finalized()
File "C:\Python34\lib\distutils\cmd.py", line 107, in ensure_finalized
self.finalize_options()
File "C:\Users\One\AppData\Local\Temp\pip_build_One\pygit2\setup.py", line 103, in finalize_option
ffi, C = get_ffi()
File "pygit2\_utils.py", line 101, in get_ffi
include_dirs=[libgit2_include], library_dirs=[libgit2_lib])
File "C:\Python34\lib\site-packages\cffi\api.py", line 373, in verify
lib = self.verifier.load_library()
File "C:\Python34\lib\site-packages\cffi\verifier.py", line 96, in load_library
self._compile_module()
File "C:\Python34\lib\site-packages\cffi\verifier.py", line 192, in _compile_module
outputfilename = ffiplatform.compile(tmpdir, self.get_extension())
File "C:\Python34\lib\site-packages\cffi\ffiplatform.py", line 38, in compile
outputfilename = _build(tmpdir, ext)
File "C:\Python34\lib\site-packages\cffi\ffiplatform.py", line 62, in _build
dist.run_command('build_ext')
File "C:\Python34\lib\distutils\dist.py", line 974, in run_command
cmd_obj.run()
File "C:\Python34\lib\site-packages\setuptools\command\build_ext.py", line 52, in run
_build_ext.run(self)
File "C:\Python34\lib\distutils\command\build_ext.py", line 339, in run
self.build_extensions()
File "C:\Python34\lib\distutils\command\build_ext.py", line 448, in build_extensions
self.build_extension(ext)
File "C:\Python34\lib\site-packages\setuptools\command\build_ext.py", line 186, in build_extension
_build_ext.build_extension(self,ext)
File "C:\Python34\lib\distutils\command\build_ext.py", line 503, in build_extension
depends=ext.depends)
File "C:\Python34\lib\distutils\msvc9compiler.py", line 460, in compile
self.initialize()
File "C:\Python34\lib\distutils\msvc9compiler.py", line 371, in initialize
vc_env = query_vcvarsall(VERSION, plat_spec)
File "C:\Python34\lib\distutils\msvc9compiler.py", line 287, in query_vcvarsall
raise ValueError(str(list(result.keys())))
ValueError: ['path']
----------------------------------------
Cleaning up...
Command python setup.py egg_info failed with error code 1 in C:\Users\One\AppData\Local\Temp\pip_bui
Storing debug log for failure in C:\Users\One\pip\pip.log
Here is the solution for you.
You were probably trying to fix the wrong thing.
vcvarsall.bat is the main issue here
error: Unable to find vcvarsall.bat

Ascii error in test of zfec utility

I am trying to play with zfec, a fast erasure codec which can be used as a command line utility. The error I get is:
UnicodeEncodeError: 'ascii' codec can't encode character u'\u2022' in position 697: ordinal not in range(128)
Any ideas on how to remedy this? As a reference, here is the full textual output from the test:
$ python ./setup.py test
running test
Searching for argparse>=0.8
Reading http://pypi.python.org/simple/argparse/
Best match: argparse 1.2.1
Downloading http://argparse.googlecode.com/files/argparse-1.2.1.tar.gz#md5=2fbef8cb61e506c706957ab6e135840c
Processing argparse-1.2.1.tar.gz
Running argparse-1.2.1/setup.py -q bdist_egg --dist-dir /var/folders/dd/z2b28q_n0j5fb8qmxhrn80200000gn/T/easy_install-5I4rNB/argparse-1.2.1/egg-dist-tmp-0yDZUv
warning: no previously-included files matching '*.pyc' found anywhere in distribution
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '*.orig' found anywhere in distribution
warning: no previously-included files matching '*.rej' found anywhere in distribution
no previously-included directories found matching 'doc/_build'
no previously-included directories found matching 'env24'
no previously-included directories found matching 'env25'
no previously-included directories found matching 'env26'
no previously-included directories found matching 'env27'
zip_safe flag not set; analyzing archive contents...
Installed /Users/Andrew/Documents/Academic Work/Computing/Extracurricular Programming/zfec-1.4.24/argparse-1.2.1-py2.5.egg
Searching for pyutil>=1.3.19
Reading http://pypi.python.org/simple/pyutil/
Best match: pyutil 1.9.7
Downloading https://pypi.python.org/packages/source/p/pyutil/pyutil-1.9.7.tar.gz#md5=5a20ccae479d967d3fa11b905d0e10f6
Processing pyutil-1.9.7.tar.gz
Running pyutil-1.9.7/setup.py -q bdist_egg --dist-dir /var/folders/dd/z2b28q_n0j5fb8qmxhrn80200000gn/T/easy_install-oG8lMI/pyutil-1.9.7/egg-dist-tmp-2t_5qj
running test
Searching for pyutil>=1.3.19
Reading http://pypi.python.org/simple/pyutil/
Best match: pyutil 1.9.7
Downloading https://pypi.python.org/packages/source/p/pyutil/pyutil-1.9.7.tar.gz#md5=5a20ccae479d967d3fa11b905d0e10f6
Processing pyutil-1.9.7.tar.gz
Running pyutil-1.9.7/setup.py -q bdist_egg --dist-dir /var/folders/dd/z2b28q_n0j5fb8qmxhrn80200000gn/T/easy_install-owyC0b/pyutil-1.9.7/egg-dist-tmp-IZuxzi
Traceback (most recent call last):
File "./setup.py", line 191, in <module>
_setup(repr(readmetext))
File "./setup.py", line 185, in _setup
zip_safe=False, # I prefer unzipped for easier access.
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/distutils/core.py", line 151, in setup
dist.run_commands()
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/distutils/dist.py", line 986, in run_commands
self.run_command(cmd)
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/distutils/dist.py", line 1006, in run_command
cmd_obj.run()
File "/Users/Andrew/Documents/Academic Work/Computing/Extracurricular Programming/zfec-1.4.24/setuptools-0.6c16dev3.egg/setuptools/command/test.py", line 111, in run
self.distribution.fetch_build_eggs(self.distribution.install_requires)
File "/Users/Andrew/Documents/Academic Work/Computing/Extracurricular Programming/zfec-1.4.24/setuptools-0.6c16dev3.egg/setuptools/dist.py", line 284, in fetch_build_eggs
parse_requirements(requires), installer=self.fetch_build_egg
File "/Users/Andrew/Documents/Academic Work/Computing/Extracurricular Programming/zfec-1.4.24/setuptools-0.6c16dev3.egg/pkg_resources.py", line 573, in resolve
dist = best[req.key] = env.best_match(req, self, installer)
File "/Users/Andrew/Documents/Academic Work/Computing/Extracurricular Programming/zfec-1.4.24/setuptools-0.6c16dev3.egg/pkg_resources.py", line 823, in best_match
return self.obtain(req, installer) # try and download/install
File "/Users/Andrew/Documents/Academic Work/Computing/Extracurricular Programming/zfec-1.4.24/setuptools-0.6c16dev3.egg/pkg_resources.py", line 835, in obtain
return installer(requirement)
File "/Users/Andrew/Documents/Academic Work/Computing/Extracurricular Programming/zfec-1.4.24/setuptools-0.6c16dev3.egg/setuptools/dist.py", line 327, in fetch_build_egg
return cmd.easy_install(req)
File "/Users/Andrew/Documents/Academic Work/Computing/Extracurricular Programming/zfec-1.4.24/setuptools-0.6c16dev3.egg/setuptools/command/easy_install.py", line 453, in easy_install
return self.install_item(spec, dist.location, tmpdir, deps)
File "/Users/Andrew/Documents/Academic Work/Computing/Extracurricular Programming/zfec-1.4.24/setuptools-0.6c16dev3.egg/setuptools/command/easy_install.py", line 483, in install_item
dists = self.install_eggs(spec, download, tmpdir)
File "/Users/Andrew/Documents/Academic Work/Computing/Extracurricular Programming/zfec-1.4.24/setuptools-0.6c16dev3.egg/setuptools/command/easy_install.py", line 663, in install_eggs
return self.build_and_install(setup_script, setup_base)
File "/Users/Andrew/Documents/Academic Work/Computing/Extracurricular Programming/zfec-1.4.24/setuptools-0.6c16dev3.egg/setuptools/command/easy_install.py", line 938, in build_and_install
self.run_setup(setup_script, setup_base, args)
File "/Users/Andrew/Documents/Academic Work/Computing/Extracurricular Programming/zfec-1.4.24/setuptools-0.6c16dev3.egg/setuptools/command/easy_install.py", line 927, in run_setup
run_setup(setup_script, args)
File "/Users/Andrew/Documents/Academic Work/Computing/Extracurricular Programming/zfec-1.4.24/setuptools-0.6c16dev3.egg/setuptools/sandbox.py", line 62, in run_setup
lambda: execfile(
File "/Users/Andrew/Documents/Academic Work/Computing/Extracurricular Programming/zfec-1.4.24/setuptools-0.6c16dev3.egg/setuptools/sandbox.py", line 105, in run
return func()
File "/Users/Andrew/Documents/Academic Work/Computing/Extracurricular Programming/zfec-1.4.24/setuptools-0.6c16dev3.egg/setuptools/sandbox.py", line 64, in <lambda>
{'__file__':setup_script, '__name__':'__main__'}
File "setup.py", line 117, in <module>
# before building sdists or eggs:
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/distutils/core.py", line 151, in setup
dist.run_commands()
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/distutils/dist.py", line 986, in run_commands
self.run_command(cmd)
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/distutils/dist.py", line 1006, in run_command
cmd_obj.run()
File "/Users/Andrew/Documents/Academic Work/Computing/Extracurricular Programming/zfec-1.4.24/setuptools-0.6c16dev3.egg/setuptools/command/bdist_egg.py", line 167, in run
self.run_command("egg_info")
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/distutils/cmd.py", line 333, in run_command
self.distribution.run_command(command)
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/distutils/dist.py", line 1006, in run_command
cmd_obj.run()
File "/Users/Andrew/Documents/Academic Work/Computing/Extracurricular Programming/zfec-1.4.24/setuptools-0.6c16dev3.egg/setuptools/command/egg_info.py", line 170, in run
writer(self, ep.name, os.path.join(self.egg_info,ep.name))
File "/Users/Andrew/Documents/Academic Work/Computing/Extracurricular Programming/zfec-1.4.24/setuptools-0.6c16dev3.egg/setuptools/command/egg_info.py", line 379, in write_pkg_info
metadata.write_pkg_info(cmd.egg_info)
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/distutils/dist.py", line 1088, in write_pkg_info
self.write_pkg_file(pkg_info)
File "/opt/local/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/distutils/dist.py", line 1113, in write_pkg_file
file.write('Description: %s\n' % long_desc)
UnicodeEncodeError: 'ascii' codec can't encode character u'\u2022' in position 697: ordinal not in range(128)
Try to install pyutil, it worked for me.
This guys solved a similar problem installing pyutil in this link.

Is there 64-bit version pymongo?

When i install pymongo using easy_install with 64-bit python, exception happens. But it works with 32-bit python. It seems only 32-bit python is supported.
So i want to know whether 64-bit pymongo exists?
Thanks.
--- more details ---
running install
running bdist_egg
running egg_info
writing pymongo.egg-info\PKG-INFO
writing top-level names to pymongo.egg-info\top_level.txt
writing dependency_links to pymongo.egg-info\dependency_links.txt
reading manifest file 'pymongo.egg-info\SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching '*.h' under directory 'pymongo'
writing manifest file 'pymongo.egg-info\SOURCES.txt'
installing library code to build\bdist.win-amd64\egg
running install_lib
running build_py
running build_ext
building 'bson._cbson' extension
Traceback (most recent call last):
File "F:\mongodb-mongo-python-driver-7269ec4\setup.py", line 184, in <module>
"doc": doc})
File "C:\Python26\lib\distutils\core.py", line 152, in setup
dist.run_commands()
File "C:\Python26\lib\distutils\dist.py", line 975, in run_commands
self.run_command(cmd)
File "C:\Python26\lib\distutils\dist.py", line 995, in run_command
cmd_obj.run()
File "build\bdist.win-amd64\egg\setuptools\command\install.py", line 76, in ru
n
File "build\bdist.win-amd64\egg\setuptools\command\install.py", line 96, in do
_egg_install
File "C:\Python26\lib\distutils\cmd.py", line 333, in run_command
self.distribution.run_command(command)
File "C:\Python26\lib\distutils\dist.py", line 995, in run_command
cmd_obj.run()
File "build\bdist.win-amd64\egg\setuptools\command\bdist_egg.py", line 175, in
run
File "build\bdist.win-amd64\egg\setuptools\command\bdist_egg.py", line 161, in
call_command
File "C:\Python26\lib\distutils\cmd.py", line 333, in run_command
self.distribution.run_command(command)
File "C:\Python26\lib\distutils\dist.py", line 995, in run_command
cmd_obj.run()
File "build\bdist.win-amd64\egg\setuptools\command\install_lib.py", line 20, i
n run
File "C:\Python26\lib\distutils\command\install_lib.py", line 112, in build
self.run_command('build_ext')
File "C:\Python26\lib\distutils\cmd.py", line 333, in run_command
self.distribution.run_command(command)
File "C:\Python26\lib\distutils\dist.py", line 995, in run_command
cmd_obj.run()
File "F:\mongodb-mongo-python-driver-7269ec4\setup.py", line 108, in run
build_ext.run(self)
File "C:\Python26\lib\distutils\command\build_ext.py", line 345, in run
self.build_extensions()
File "C:\Python26\lib\distutils\command\build_ext.py", line 471, in build_exte
nsions
self.build_extension(ext)
File "F:\mongodb-mongo-python-driver-7269ec4\setup.py", line 118, in build_ext
ension
build_ext.build_extension(self, ext)
File "C:\Python26\lib\distutils\command\build_ext.py", line 536, in build_exte
nsion
depends=ext.depends)
File "C:\Python26\lib\distutils\msvc9compiler.py", line 448, in compile
self.initialize()
File "C:\Python26\lib\distutils\msvc9compiler.py", line 358, in initialize
vc_env = query_vcvarsall(VERSION, plat_spec)
File "C:\Python26\lib\distutils\msvc9compiler.py", line 274, in query_vcvarsal
l
raise ValueError(str(list(result.keys())))
ValueError: [u'path']
Run vcvarsall.bat first, then install pymongo.

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