Using linux console in pycharm - python

I'm new to pycharm, virtualenv, linux and git.
I've recently begun a journey of using djangoto make webapps. Before I used sublime to make scripts however now a more complex project management system such as pycarm was needed. I actually wanted to get a linux VM and go down that road but was advised that windows python IDE such as pycharm would be suitable
I recently learnt the importance of dependencies and how to use virtualenv. However in this tutorial, under the 'How do I use my shiny new virtual environment?' it starts using commands such as:
ls env
and
which python
Neither of which my pycharm console would understand.
I could use a console emulator such cmder to use the commands but then I would remove the convience of using the IDE's integrated one.
Should I upgrade to a linux VM ? Or can I install a package that allows me to use such commands in PyCharm.
As a bonus question, what are the commands in that tutorial ? are they linux commands? when ever i see $ .... is that the linux console ?

You can accomplish this using Vagrant: https://www.vagrantup.com/
You can use Vagrant and VirtualBox to setup a Linux VM (distro of your choice) and then install all of your Python dependencies in the VM. Once you have that setup, you can tell PyCharm to use the Python interpreter in your VM by following these steps:
Open the project settings dialog box in PyCharm.
Expand Project: (your project name) on the left side.
Click on Project Interpreter.
Click on the cog icon on the upper right side of the window and select Add Remote.
Click on the Vagrant radio button.
In the Vagrant Instance Folder box, select the directory your Vagrantfile is located in.
In the Vagrant Host URL box, make sure ssh://vagrant#127.0.0.1:2222 is specified.
Click OK.
Since Vagrant is compatible with Windows this solution should work for you. I have done it successfully using macOS and it works great. Good luck!
You might find this tutorial useful: https://developer.rackspace.com/blog/a-tutorial-on-application-development-using-vagrant-with-the-pycharm-ide/

I got this to work on Windows 10 with Anaconda Prompt. This terminal which comes with Anaconda, creates a "base" environment with a linux-like virtual machine and your Windows file system (C:\\) mounted to /c, and has bash installed with common Unix commands like cd, ls, chmod, echo, cat, ... Running programs from bash with access to environment variables is much nicer than Windows Powershell etc.
Now to get your Terminal in Pycharm to use Anaconda Prompt instead of cmd.exe, I followed this answer. After installing Anaconda and/or Anaconda Prompt, right-click -> Open File Location -> right-click the shortcut -> Properties -> copy file path. Then use your file path instead.
Conda is great for package environment management. Learn more about it here. For Django + Conda specifically, read here. You can also use pip to install from Python package indexes, github repos, and requirements.txt files instead. Unless you know how Anaconda Prompt works, I don't recommend creating your own environments from scratch. What worked for me was:
(base) C:\Users\wassadamo> conda create -n mynewenvironment --copy base
...
(base) C:\Users\wassadamo> conda activate mynewenvironment
(mynewenvironment) C:\Users\wassadamo> ls
folderA folderB file.txt
Works!
Whenever I try running conda deactivate to leave the base environment, my bash commands would stop working. So clone base as above.
Another tip: if you want to run shell scripts from Terminal within PyCharm with Anaconda Prompt this way, then execute them (e.g. "run.sh") on command line with
bash run.sh
I tried putting this on the first line of my run.sh
#!/usr/bin/bash
And running it with
./run.sh
But this had the effect of running it in an external Anaconda Prompt instance (add sleep, or some user input command to force it to wait and see for yourself). Explicitly running my .sh files with bash had the desired effect of running them in the same shell as I started them in PyCharm Terminal configured with Anaconda Prompt.

Related

Visual Code how can I activate the virtual environment automatically?

Maybe a simple question, but I cannot figure it out. I work within Visual Studio Code on a MacBook. Within a directory I create a virtual environment and have activated that with source .venv/bin/activate scripts and everything works fine.
In the terminal I see (.venv) (base) gaston#MacBook-Pro WebScraping %
When I start visual code another time and open this same directory I do not see the (.venv) so I again give manually the command to activate.
My question is there a way to activate the virtual environment automatically when opening the directory?
VS Code Default Python Interpreter Path
You can do this in a number of ways. If your goal is to have the virtual environment selected immediately at the launch of VS Code, you will have to target that virtual environment as the Python Interpreter in VSC.
https://code.visualstudio.com/docs/python/environments
System Preferences->Settings->Python: Default Interpreter Path
You'll want to point it to your virtualenv Python installation, likely something like:
envFolder/bin/python3
VS Code Launch Configuration Python Interpreter
You can also set a specific launch configuration so that VSCode will still use your system Python instance by default; however, specific launch configurations will have the virtual environment specified.
https://code.visualstudio.com/docs/python/debugging
I did something within settings and now it works.
When I open VSC now it opens the directory and the right environment, just the way I wanted it.
Took me some while to figure what finally did the trick:
I opened settings Command + , typed env in the search box. Scrolled through the results until I saw:
Python > Terminal: Activate Env In Current Terminal
and checked the checkbox. That solved my problem.

Use Visual Studio Code with Miniconda on macOS

On my Mac, I installed Python using Miniconda and I have also installed various Python packages using conda. In the Mac Terminal app, my base conda environment is active and when I run Python it correctly uses the Miniconda version of Python as shown below:
In Visual Studio Code (VSCode), I have selected the Miniconda version of Python using the Python Interpreter setting. The correct version of Python and conda environment is shown at the bottom of the window:
However, when I use the built-in terminal in VSCode it still uses the macOS Python even though it shows the base conda environment is active:
I'm using the Python, One Dark Pro, and Jupyter extensions in VSCode. Also, the $PATH in the VSCode terminal and in the Mac terminal app returns the following:
# VSCode terminal
base ❯ echo $PATH
/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Library/TeX/texbin:/Library/Apple/usr/bin:/Users/gavinw/miniconda3/bin:/Users/gavinw/miniconda3/condabin
# Mac terminal app
base ❯ echo $PATH
/Users/gavinw/miniconda3/bin:/Users/gavinw/miniconda3/condabin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Library/TeX/texbin:/Library/Apple/usr/bin
How can I configure the Visual Studio Code terminal to use the Miniconda version of Python?
After selecting the Python that comes with conda, the Python interpreter will be displayed in the lower left corner of VSCode, and then use the shortcut key Ctrl+Shift+` to open a new VSCode terminal, (or click "Terminal", "New terminal") it will automatically enter the selected environment and activate it automatically.
The terminal uses whatever python environment your configured shell command is set to. It is in no way linked to the environment of VS Code
However, If you attempt to run a Python file, it will open up the terminal with the full path to the specified interpreter
These details are laid out in the docs
The Python extension uses the selected environment for running Python code (using the Python: Run Python File in Terminal command), providing language services (auto-complete, syntax checking, linting, formatting, etc.) when you have a .py file open in the editor, and opening a terminal with the Terminal: Create New Integrated Terminal command. In the latter case, VS Code automatically activated the selected environment.
Also, if using code command from an activated session...
launching VS Code from a shell in which a certain Python environment is activated does not automatically activate that environment in the default Integrated Terminal.
Otherwise, launching the desktop app directly would also not be done from an activated conda environment
You may want to check the value in your settings for "python.terminal.activateEnvironment", but I believe this only applies when you actually run a .py file

Python Virtual Environment Shebang for Window and Linux

I have a python file that I'd like to execute using the virtual environment (venv) in the same directory as the file. I'd like it to use this venv regardless of whether the user has activated it or not to avoid accidentally running it without the proper environment. I'd like this to work on both Linux and Windows (via Git Bash).
The issue is that venv puts python under the "bin" directory on Linux but under "Scripts" on Windows and I can't seem to find a way to change this behavior when creating it. I tried creating it with Git Bash in hopes that it would "trick" python into using a bin directory instead of Scripts, but that didn't work.
The following shebang works well on Linux:
#!.venv3/bin/python
And this one works well on Windows:
#!.venv3/Scripts/python
But what will work on both? I know that one option would be to create a shell script that activates the environment based on the detected os (using $OSTYPE), but I'd like to avoid this if possible as it isn't otherwise necessary.
You could use the Windows version of the shebang:
#!.venv3/Scripts/python
and then create a symbolic link on the Linux side:
.venv3/Scripts -> .venv3/bin
I just tried this with one of my virtual envs. It worked fine for me. I didn't test the Windows case, but of course, that has to work as we're using the correct shebang for Windows to begin with.

python flask how to access CLI from terminal when running application from Pycharm

I am using python 2.7 with flask and using pycharm professional IDE, I am running the flask application using a virtual environment from inside pycharm.
When I open a terminal inside pycharm and use CLI commands, it works, and when I open a terminal (regular terminal) outside of the IDE, and trying to use the same command it's not working, the app is still running all the time, and the command is excactly the same.
When I try to activate the same venv outside of the IDE i get permission issue, I assume that it has to do with the venv already being active inside the IDE.
What is the issue? I need to run the same virtual environment in order to use the CLI commands?
How can i access the CLI commands from outside of the IDE?
Thanks
When I try to activate the same venv outside of the IDE I get permission issue
Most likely the problem is all about permission access to the virtual environment's files. Check out access permissions and user:group ownership using ls -al (if you're on Mac or Linux), more info here:
https://linux.die.net/man/1/ls
https://linux.die.net/man/1/chmod
https://linux.die.net/man/1/chown
I assume that it has to do with the venv already being active inside the IDE
Definitely not, you can activate it as many times as you want.
I need to run the same virtual environment in order to use the CLI commands?
At least you have to have all the dependencies installed in your other environment (global or virtual) if you have plans to use one.
when I open a terminal (regular terminal) outside of the IDE, and trying to use the same command it's not working
You'd better post a full error output so that we could check the actual error. Also what command are you trying to run?

Is it possible to easily extract python run configuration (with additional path) from Pycharm?

I have a working Python project on my PC, which I am running from Pycharm.
It uses Pyroot (an interface to Root C++ library), whose C++ lib path I have added in Project Settings/Python Interpreter/Paths in Pycharm. It also needs to use the 2.7 Python interpreter, instead of 3., which is a default python in my terminal.
I want to run this project remotely on another desktop, so I need to be able to run it from terminal specifying the path to Root and the interpreter version.
Is there a way to easily extract from Pycharm the exact run command it is using when I'm running the code via run button?
Alternatively, if that's impossible, how should I specify the path to Root and the interpreter version when running from terminal?
I guess to best way is to create a virtualenv either in the terminal or in pycharm including the corrext python version 2.7 and install pyroot via pip into this virtualenv. Then you can simply ssh in the remote host, activate the venv and start your project from the terminal. Or you ssh into it with X-forwarding and start Pycharm itself from your client.
If you select the correct project and go to File > Settings, under the Project Settings you can see the Project Interpreter which tells you which interpreter is being used.
Hope this is what you are looking for.

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