Managing python2 and python3 at the same time - python

I am taking two courses at uni each requirering you to use two different versions of python, and I am new to both.
One requires you to use python 3 with jupyter notebook and the other to use python 2 with Spyder.
I have installed both through anaconda, and python3 is set as my default.
I am trying to import packages from SciKit Learn to use in Spyder with Python 2.7. When i try pip install -U scikit-learn in the command prompt, it says it is allready up to date but refers to the default folder of Anaconda3\lib\sitepackages, which obviously does not help me install it in python 2.
How do I change this to update the package in Python2 instead?
Thank you!

Double check which version of python that the pip you're using refers to:
$ pip -V
# pip 9.0.1 from /usr/local/lib/python3.5/dist-packages (python 3.5)
$ pip2 -V
# pip 9.0.1 from /usr/local/lib/python2.7/dist-packages (python 2.7)
$ pip3 -V
# pip 9.0.1 from /usr/local/lib/python3.5/dist-packages (python 3.5)
I'm not sure exactly what your setup looks like, but if it's defaulting to python 3.5 like mine does, then doing a pip install will install the package for python3 instead of python2
Hopefully that helps!

It is always better to use virtualenv to manage different python environments.
virtualenv -p /usr/bin/python2.7 yourenvname
For activation use, source ./yourenvname/bin/activate
When you activate the virtual environment and use pip command, it will use the pip from the local bin path. (Use which pip or pip -Vto check the location)
Now as I understand you are using Anaconda, you can create a new virtual environment using the conda command.
conda create -n yourenvname python=x.x anaconda
For activation use, source activate yourenvname
If you do not use these solutions, then you want to find the anaconda's python2.7 bin directory and invoke it. (Try with pip2)
Resources -
https://uoa-eresearch.github.io/eresearch-cookbook/recipe/2014/11/20/conda/

Related

pip version is old in virtual environment [duplicate]

As part of the compilation step for a new python version, I fetch and run get-pip.py, to have the latest pip installed next to the python executable:
$ /opt/python/3.7.0/bin/python --version
Python 3.7.0
$ /opt/python/3.7.0/bin/pip --version
pip 18.0 from /opt/python/3.7.0/lib/python3.7/site-packages/pip (python 3.7)
I have 25 such versions under /opt/python, although I mostly use the five latest versions of each major.minor version that is not EOL. To setup an invironment I used to run virtualenv or my virtualenvutils with the -p /opt/python/X.Y.Z/bin/python option to get a virtual environment with a specific version.
With Python 3.7 this gives the imp module deprecation warning:
$ virtualenv -p /opt/python/3.7.0/bin/python /tmp/py37virtualenv
Running virtualenv with interpreter /opt/python/3.7.0/bin/python
Using base prefix '/opt/python/3.7.0'
/opt/util/virtualenvutils/lib/python3.6/site-packages/virtualenv.py:1041: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses
import imp
New python executable in /tmp/py37virtualenv/bin/python
Installing setuptools, pip, wheel...done.
I have little hope this will be solved in virtualenv, as this has had a PendingDeprecationWarning at least since 2014 (as can be seen from the output in this question)
While investigating replacing virtualenv with python -m venv in virtualenvutils, I first created a new venv based virtual environment by hand:
$ /opt/python/3.7.0/bin/python -m venv /tmp/py37venv
$ /tmp/py37venv/bin/pip --version
pip 10.0.1 from /tmp/py37venv/lib/python3.7/site-packages/pip (python 3.7)
That has an old pip version! If you use it, you'll get:
You are using pip version 10.0.1, however version 18.0 is available.
You should consider upgrading via the 'pip install --upgrade pip' command
In the virtual environment created with virtualenv you immediately get the latest version:
$ /tmp/py37virtualenv/bin/pip --version
pip 18.0 from /tmp/py37virtualenv/lib/python3.7/site-packages/pip (python 3.7)
I can run a post-creation step:
/tmp/py37venv/bin/pip install -U --disable-pip-version-check pip
which will take extra time. And if there was a some security update for pip, this would imply running the non-secure version to get a secure version, an ideal point of attack.
From virtualenvutils it is trivial to do the multiple steps to create a pip-less virtualenv and then add pip using get-pip.py. From the command-line this is not so simple:
$ /opt/python/3.7.0/bin/python -m venv --without-pip /tmp/py37venvnopip
$ /tmp/py37venvnopip/bin/python -c "from urllib.request import urlopen; response = urlopen('https://bootstrap.pypa.io/get-pip'); open('/tmp/tmp_get_pip.py', 'w').write(response.read())"
$ /opt/python/3.7.0/bin/python /tmp/tmp_get_pip.py
......
$ /opt/python/3.7.0/bin/pip --version
pip 18.0 from /opt/python/3.7.0/lib/python3.7/site-packages/pip (python 3.7)
What is causing /opt/python/3.7.0/bin/python -m venv to take that old pip version? Is that the version available when 3.7.0 was released?
How can I update my install under /opt/python/3.7.0 in some way so that using /opt/python/3.7.0/bin/python -m venv creates a virtualenv with the latest pip version without reverting to scripts, aliases or using multiple commands? Having the latest pip installed under /opt/python/3.7.0 obviously is not enough.
There are two bundled wheels:
/opt/python/3.7.0/lib/python3.7/ensurepip/_bundled/setuptools-39.0.1-py2.py3-none-any.whl
/opt/python/3.7.0/lib/python3.7/ensurepip/_bundled/pip-10.0.1-py2.py3-none-any.whl
I suspect I need to update those. Is there a better way than updating those by hand? Some option for /some/python -m venv would be nice.
(And running /some/python -m ensurepip --upgrade doesn't do the trick)
Running the deprecated /opt/python/3.7.0/bin/pyvenv has the same old pip version problem.
The trick is not to install the bundled version of pip (which will almost always be out of date), but to use it to install the most current version from the internet.
Standard library venv offers a --without-pip flag that can help here. After creating the virtual environment without pip, you can then you can "execute" ensurepip's wheel directly thanks to Python's zip importer. This is both faster and less hacky than installing pip and then immediately using that same pip installation to uninstall itself and upgrade.
Code speaks louder than words, so here's an example bash function for the process I've described:
# in ~/.bashrc or wherever
function ve() {
local py="python3"
if [ ! -d ./.venv ]; then
echo "creating venv..."
if ! $py -m venv .venv --prompt=$(basename $PWD) --without-pip; then
echo "ERROR: Problem creating venv" >&2
return 1
else
local whl=$($py -c "import pathlib, ensurepip; whl = list(pathlib.Path(ensurepip.__path__[0]).glob('_bundled/pip*.whl'))[0]; print(whl)")
echo "boostrapping pip using $whl"
.venv/bin/python $whl/pip install --upgrade pip setuptools wheel
source .venv/bin/activate
fi
else
source .venv/bin/activate
fi
}
If you prefer the older project virtualenv, it also offers --no-pip, --no-setuptools, and --no-wheel flags to achieve the same on Python 2.7.
Note: Python 3.9+ venv has an --upgrade-deps option to immediately upgrade the pip/setuptools versions after creating an environment, see https://bugs.python.org/issue34556 for more info about that. I don't use this option because it still goes through an unnecessary install/uninstall of the vendored versions, which is inferior to the method of creating an environment with the latest versions directly as shown above.
I use upgrade-ensurepip to update those pip and setuptools wheel files that are part of the ensurepip package. It's not as elegant as being able to upgrade ensurepip via pip, but it's still preferable to doing it manually.
https://pypi.org/project/upgrade-ensurepip/
It is an expected behavior. python -m venv calls python -m ensurepip to install pip and This answer shows that ensurepip would only install the bundled version even with --upgrade option. There isn't any official option to update the bundled pip and setuptools.
Well I have also no good idea to fix this problem as it just is the designed behavior. I would like to give two suggestions:
Use pipenv. It is really good! And it will be the next-generation official package manager in the future(Although there is a big problem related to current Pypi's structure. In short, a package manager can only decide the dependencies with downloading the whole package. This gives a huge difficulty to building dependencies graph.).
Implement your custom EnvBuilder, actually there is an official example about this. And in the example, it also use get-pip.py to install the latest pip.

Use Anaconda installed pip

I have
python --version
Python 3.6.9 :: Anaconda, Inc.
but
pip3 --version
pip 19.2.2 from /home/ss/.local/lib/python3.5/site-packages/pip (python 3.5)
pip --version
pip 19.2.2 from /home/ss/.local/lib/python3.5/site-packages/pip (python 3.5)
I installed pip for anaconda as
conda install -c anaconda pip
But it did not change the pip path, it is still 3.5 sys path.
How do I use pip installed in anaconda python dir for python 3.6.9?
Use python -m pip <operation>
The reason you want to use python -m <module> is that pip might not necessarily refer to the python installation you are referring to. Even if you have run activate /some/env, that still doesn't guarantee that the pip binary will be the one used.
For instance, the $PATH environment variable might have the python paths appended rather than prepended, so pip might live in /usr/local/bin which will be searched first, giving the wrong pip.
However, you know which python you want to use, and by using the -m flag, you explicitly tie that module to the python version specified by python

Problems of VirtualEnv and pip3

I used VirtualEnv to create a python2 environment without system site packages like this:
virtualenv -p /usr/bin/python2.7 --no-site-packages ENV2.7
And I want to install packages in this environment.
However, I found that my python code is still trying to look for packages out of this environment.
For example, after activate this env, I used:
pip install matplotlib
And in my demo.py, there is
import matplotlib
But this raised an error, and can not find this package
However, when I use python in the terminal and enter the interactive python, import matplotlib dose not raise an error.
Then I started another terminal and tried to install this package out of the environment by pip3:
pip3 install matplotlib
It turned out that my demo.py just work well.
Any idea? Many Thanks!
It sounds like your virtualenv pip version may be using pip3 instead of pip2:
Make sure you are using the correct python version in your project that you mean to, and using the same version of pip in your virtualenv. (Note that you use pip above once, then you used pip3 outside your virtualenv.)
Check your pip version from inside the virtualenv:
workon (your env name)
which pip
pip -V
Output should look something like:
$ which pip
/home/yourname/.virtualenvs/testenv/bin/pip
$ pip -V
pip 9.0.1 from /home/yourname/.virtualenvs/testenv/local/lib/python2.7/site-packages (python 2.7)
It should tell you you're using pip inside your virtualenv, and the correct python version.
If that looks correct, install your packages.
pip install (whatever)
Check they are installed with pip freeze.
Run your project. :)

Using pip on Windows installed with both python 2.7 and 3.5

I am using Windows 10. Currently, I have Python 2.7 installed. I would like to install Python 3.5 as well. However, if I have both 2.7 and 3.5 installed, when I run pip, how do I get the direct the package to be installed to the desired Python version?
You will have to use the absolute path of pip.
E.g: if I installed python 3 to C:\python35, I would use:
C:\> python35\Scripts\pip.exe install packagename
Or if you're on linux, use pip3 install packagename
If you don't specify a full path, it will use whichever pip is in your path.
Because usually i change my intepreter to run something(i got 2 diff projects with both 2 and 3), i use these solution:
Add path to the environment as usual (of course)
Rename ur python.exe , in my case i want to run python 3 using command python3 on my cmd. So i renamed my python.exe in python3.x directory with python3. Itll works with python 2 ofc.
Then to use pip in both python, i use this command.
python3 -m pip install 'somepackage'
and to run pip on python2
python -m pip install 'somepackage'
This is may not the best solution out there, but i like this one
** WINDOWS **
ref : https://datascience.com.co/how-to-install-python-2-7-and-3-6-in-windows-10-add-python-path-281e7eae62a
In my case, I have Python 2.7 and Python 3.4, with the Python Launcher for Windows.
This is the output when running this commands:
PS C:\> pip -V
pip 9.0.1 from c:\python27\lib\site-packages (python 2.7)
PS C:\> pip3 -V
pip 9.0.1 from C:\Python34\lib\site-packages (python 3.4)
I'll note that in my Python27\Scripts\ directory, I have pip.exe, pip2.exe and pip2.7.exe.
And in my Python34\Scripts\ directory, I have pip.exe, pip3.exe and pip3.4.exe.
So all of these .exe files help you when you have different versions of Python installed at the same time.
Of course, for this to work, you have to have the respective Scriptsdirectries in your Path system enviroment variable.
The answer from Farhan.K will work. However, I think a more convenient way would be to rename python35\Scripts\pip.exe to python35\Scripts\pip3.exe assuming python 3 is installed in C:\python35.
After renaming, you can use pip3 when installing packages to python v3 and pip when installing packages to python v2. Without the renaming, your computer will use whichever pip is in your path.
I would advise against ever calling any pip script directly (nor pip3, pip2.7.exe, anything like that).
Instead, a surefire way is to always prefer the explicit variant of calling pip's executable module for a specific Python interpreter:
path/to/pythonX.Y -m pip somecommand
path/to/venv/bin/python -m pip somecommand
C:\path\to\venv\Scripts\python.exe -m pip somecommand
There are many advantages to this, for example:
It is explicit for which Python interpreter the projects will be pip-installed (Python 2 or 3, inside the virtual environment or not, etc.)
For a virtual environment, one can pip-install (or do other things) without activating it: path/to/venv/bin/python -m pip install SomeProject
Under Windows this is the only way to safely upgrade pip itself path\to\venv\Scripts\python.exe -m pip install --upgrade pip
But yes, if all is perfectly setup, then python3 -m pip install SomeProject and pip3 install SomeProject should do the exact same thing, but there are way too many cases where there is an issue with the setup and things don't work as expected and users get confused (as shown by the many questions about this topic on this platform).
References
Brett Cannon's article "Why you should use python -m pip"
pip's documentation section on "Upgrading pip"
venv's documentation section on "Creating virtual environments": "You don’t specifically need to activate an environment [...]"
I ran across an issue with running pip with absolute path. This might be related to WinPython's installation routine and the order of installing Python 3.6 first, 2.7 second, or Python 3.6 being in the path.
No matter which pip was called, it was activating the 3.6 one:
λ C:\prog\WinPython-64bit-2.7.13.1Zero\python-2.7.13.amd64\Scripts\pip2.exe --version
pip 9.0.1 from C:\prog\WinPython-64bit-3.6.1.0Zero\python-3.6.1.amd64\lib\site-packages (python 3.6)
What finally did the trick was calling pip as a module of the respective python binary:
λ C:\prog\WinPython-64bit-2.7.13.1Zero\python-2.7.13.amd64\python.exe -m pip --version
pip 9.0.1 from C:\prog\WinPython-64bit-2.7.13.1Zero\python-2.7.13.amd64\lib\site-packages (python 2.7)
Hope that might help someone with similar issues.
I tried many things , then finally
pip3 install --upgrade pip worked for me as i was facing this issue since i had both python3 and python2.7 installed on my system.
mind the pip3 in the beginning and pip in the end.
And yes you do have to run in admin mode the command prompt and make sure if the path is set properly.
1-open command prompt and change direction using the command cd C:\Python35\Scripts
2- write the command pip3 install --upgrade pip
3- close the command prompt and reopen it again to return to the default direction and use the command pip3.exe install package_name to install any package you want

How to override the pip command to Python3.x instead of Python2.7?

I am using OSX and I have pip installed for both Python3.5 and Python2.7. I know I can run the command pip2 to use Python2 and when I use the command pip3 Python3.x will be used.
The problem is that the default of pip is set to Python2.7 and I want it to be Python3.x.
How can I change that?
edit:
No, I am not running a virtual environment yet. If it was a virtual environment I could just run Python3.x and forget all about Python2.7, unfortunately since OSX requires Python2.7 for it's use I can't do that. Hence why I'm asking this.
Thanks for the answer. I however don't want to change what running python does. Instead I would like to change the path that running pip takes. At the moment pip -V shows me pip 8.1.2 from /Library/Python/2.7/site-packages (python 2.7), but I am looking for pip 8.1.2 from /Library/Frameworks/Python.framework/Versions/3.5/lib/python3.5/site-packages (python 3.5) I am sure there has to be a way to do this. Any ideas?
Run this:
pip3 install --upgrade --force pip
or even more explicit:
python3 -m pip install --upgrade --force pip
This will install pip for Python 3 and make Python 3 version of pip default.
Validate with:
pip -V
I always just run it via Python itself, this way:
python3 -m pip install some_module
or
python2 -m pip install some_module
The -m calls the __main__.py module of a specified package. Pip supports this.
Can't you alias pip='pip3' in your ~/.bash_profile?
In Terminal, run nano ~/.bash_profile, then add a line to the end that reads alias pip='pip3'. This is safe; it won't affect system processes, only your terminal.
For your projects, you should be using a virtualenv.
You can choose which python will be that of the virtualenv at creation time, by specifying it on the command line:
virtualenv -p python3 env
# then
. env/bin/activate
python # ← will run python3
That python interpreter will be the one used when you run python or pip while the virtualenv is active.
Under the hood, activating the virtualenv will:
modify your PATH environment setting so binaries in env/bin
override those from your system.
modify your PYTHONHOME
environment setting so python modules are loaded from env/lib.
So python, pip and any other package you install with pip will be run from the virtualenv, with the python version you chose and the package versions you installed in the virtualenv.
Other than this, running python without using virtualenv will just run the default python of the system, which you cannot usually change as it would break a lot of system scripts.
It works for me:
As super-user
Uninstall pip
sudo pip uninstall pip
Install pip
sudo python3 -m pip install --upgrade --force pip
Check install path
sudo pip -V
As local-user
Uninstall pip
pip uninstall pip
Install pip
python3 -m pip install --upgrade --force pip
Check install path
pip -V
Although PEP 394 does not specifically mention pip, it does discuss a number of other Python-related commands (including python itself). The short version is that, for reasons of backwards compatibility, the unversioned commands should refer to Python 2.x for the immediate future on most reasonable systems.
Generally, these aliases are implemented as symbolic links, and you can just flip the symlink to point at the version you want (e.g. with ln -f -s $(which pip3) $(which pip) as root). But it may not be a good idea if you have any software that expects to interact with Python 2 (which may be more than you think since a lot of software interacts with Python).
The saner option is to set up a Virtualenv with Python 3. Then, within the Virtualenv, all Python-related commands will refer to 3.x instead of 2.x. This will not break the system, unlike the previous paragraph which could well break things.
Since you have specified in the comments you want syntax like pip install [package] to work, here is a solution:
Install setuptools for Python3: apt-get install python3-setuptools
Now pip for Python3 could be installed by: python3 -m easy_install pip
Now you can use pip with the specific version of Python to
install package for Python 3 by: pip-3.2 install [package]
Why not just repoint the link /bin/python to python3? It seems like the easiest solution. Especially if you want it for all users of your system.

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