Here is my setting
and this is my script
I am trying to use jupyter notebook in pyCharm, but it kept using python2 instead of python3.
Any idea about this problem?
Add:
this pic is running jupyter notebook in chrome.
My problem was that I had multiple kernels, and PyCharm launches the default kernel. One approach might be to configure PyCharm to specify the kernel of choice to start up, I didn't investigate how to do that. I simply changed the default kernel in Jupyter and this worked for me (I have a virtualenv for tensorflow). c.MultiKernelManager.default_kernel_name = 'tensorflow'.
The preferences image you show is indeed how you would setup your interpreter for PyCharm, but that's not what the output/logging of PyCharm looks like. I'm guessing that's a jupyter-notebook display, which means you are running into the issue in jupyter-notebook and not PyCharm. So you need to change your setup for jupyter. Based on some quick searching pip install jupyter will install a python 2.7 version of jupyter. Sounds like what you want is
pip3 install jupyter
which will install the python3 version for you. You will likely have to uninstall your current version of jupyter.
When you kick off Jupyter-notebook from within PyCharm there is a configuration which is created. If the configuration is initially 2.7 ( I think it defaults to the current interpreter), and then keep using that same configuration, it wouldn't matter the state of the current project interpreter because it would be using the value saved in the run configuration.
You can modify your run configuration by
Run | Run...
Edit Configurations...
Select your Jupyter Notebook run configuration on the left (here is untitled4)
Make sure the python interpreter is correct here on the right
I was able to start a jupyter notebook like this and get it to output python 3 by doing this. Hope this is what you are needing.
Related
Summary:
I am trying to set up the Jupyter Notebook extension for VSCode but I can’t get my Python code snippets to run. There is no "Run" button to select. I can't select a Python/ Jupyter kernel to work with.
The problem in greater detail:
If you check out this YouTube clip at exactly 1 minute and 46 seconds (here - - you can pause it to see the still) this is what I am trying to accomplish.
But here is what my VSCode actually looks like:
As you can see in my screenshot, the “Play” icon to the left of my code snippet is missing. Along the top border, the other “Play All” button is missing.
In Microsoft’s official VSC doc for setting up Jupyter Notebooks, right near the top under this specific heading: “Create or open a Jupyter Notebook” their interface has way more options at the top of the cells when compared to mine. They have buttons named: “Variables”, “Restart”, “Interrupt”. That is expected for Jupyter Notebook funcionality. Mine is missing all of that. Clearly there is something wrong with my setup.
Other SO users report having ms-python extension installed (which includes Jupyter functionality) in addition to stand-alone Jupyter Notebook extensions installed. Apparently in situations when you have multiple Python extensions installed, they can interfere with each other. So after much wrangling, I resolved to uninstalling all my Jupyter extensions and keeping only the main ms-python extension.
The issue persists.
Here is a complete list of all my VSC installed extensions:
$ code --list-extensions --show-versions
arcticicestudio.nord-visual-studio-code#0.19.0
batisteo.vscode-django#1.8.0
bibhasdn.django-html#1.3.0
Compulim.indent4to2#0.1.2
Equinusocio.vsc-community-material-theme#1.4.4
Equinusocio.vsc-material-theme#33.5.0
equinusocio.vsc-material-theme-icons#2.3.1
esbenp.prettier-vscode#9.8.0
formulahendry.code-runner#0.11.8
GulajavaMinistudio.mayukaithemevsc#3.2.3
icrawl.discord-vscode#5.8.0
janisdd.vscode-edit-csv#0.6.10
lonefy.vscode-JS-CSS-HTML-formatter#0.2.3
m-thorsen.vscode-materia#0.4.4
ms-python.python#2022.12.1
NikolaosGeorgiou.html-fmt-vscode#0.6.0
PKief.material-icon-theme#4.20.0
samuelcolvin.jinjahtml#0.17.0
streetsidesoftware.code-spell-checker#2.7.0
yzhang.markdown-all-in-one#3.5.0
zamerick.black-ocean#1.0.2
zhuangtongfa.material-theme#3.15.2
There is a bit of noise in that list. I'm not sure what all of them refer to. But for certain there is only one Python app (ms-python) and nothing related to Jupyter.
Some SO members elsewhere have suggested selecting / setting the base Python version/environment. When I click the “Select Kernel” button at the top right (as illustrated in the screenshot below), it reveals an empty menu (see at the top left):
Here is “Python v3.8.5 (conda)” showing as selected at the bottom and slightly to the left:
Another exhaustive question and answer thread elsewhere on Stack Overflow involving an issue similar to mine includes many, many creative potential solutions: jupyter server : not started, no kernel in vs code
In that Stack Overflow question, one prominent member answers:
How I solved it:
Press Command+Shift+P to open a new command pallete
Type >Python: Select Intepreter to start jupyter notebook server
Open the notebook again
Someone else suggests:
Press Command+Shift+P on mac, Ctrl+Shift+p on windows
Type Jupyter: Select Interpreter to start Jupyterserver
It would show you a dropdown of python versions installed.
I chose python 3.7.5 and it worked for me. you can choose the python version installed on your machine.
Another member says:
I have seen all possible solutions but not work, finally I just
upgrade jupyter, notebook, and jupyterlab, like pip install -U jupyterlab, and I can choose the kernel in VScode!
None of the above resolves my issue.
Here is a quirky new twist: After installing jupyterlab with pip, after restarting VSC, I encountered this weird error:
It’s a condition box. I clicked: “Yes”.
Jupyter is still not integrated properly.
UPDATED: Based on JialeDu’s answer, I followed his instructions. I created a video shared below. It doesn’t quite capture every step, but I did follow all the steps. What you can see in the gif video is that my current working directory is a folder called Test, a new terminal has been opened, and there is an active virtual environment with $ source .venv/bin/activate. Next, as you can see in the .gif, I am able to select the latest Python interpreter v3.10.5 showing as “Recommended”. So that is progress. I couldn’t do that before. Going the virtual environment route was a great idea. However, I am still not able to get the Jupyter Notebook interface as the end product shared by JialeDu. When I invoke Ctrl + Shift + P again and type > create jup a new Jupyter Notebook file is created but the kernel I selected previously does not show and the expected Jupyter interface buttons and options are still not showing. Here is the video demo in .gif formatting:
Please note: Here you can see a list of 4 available Jupyter extensions:
I avoided installing any of these separate Jupyter extensions in the store because according to the instructor (and as confirmed on the official Microsoft Python extension ms-python page which I already have), it includes Jupyter built in. From the ms-python extension entry, it explains: "This Python extension will automatically install the Pylance and Jupyter extensions to give you the best experience when working with Python files and Jupyter notebooks."
Even though other Stack Overflow users indicated that mixing the above extensions such as ms-python with ms-toolsai was a bad idea, I experimented with having them both installed anyway. Didn’t fix the issue. I tried uninstalling ms-python and keeping ms-toolsai. Still no dice.
By the way, I’ve also got the latest version (as of this writing) of VSCode v1.70.1 installed:
VS Code has prompted you to install the suggested extension. Python and Jupyter.
Also it helps to make sure your vscode is up to date.
The play button of the interface is provided by Jupyter, but if you want to run the code (select the kernel), you must also install the Python extension.
It’s a condition box. I clicked: “Yes”.
You don't have to click Yes because there is a time delay. By the time you click Yes, the environment may not be ready.
If you are using a virtual environment, you can select the virtual environment's interpreter and then create a new terminal to activate the environment.
Complete creation steps:
Prerequisites:
The machine has python installed,
and vscode has Python and Jupyter extensions installed.
steps
Create a new working folder Test
Open the folder Test with vscode
new terminal
Type the command python -m venv .venv to create a virtual environment
After the creation is complete, use the command .venv/scripts/activate to activate the virtual environment
Or Ctrl+Shift+P --> Python:Select Interpreter, select the interpreter of the virtual environment and then create a new terminal to activate the environment
Create new jupyter file using command palette command Create:New Jupyter Notebook
Or right click --> New File --> name ends with .ipynb
The virtual environment you just selected will be enabled as the kernel by default.
I discovered a very simple answer: I installed the VSC package in the official Snap repo.
VSC and Python-Jupyter look to be all playing nice together now:
I'm working on Ubuntu by remoteSSH, and I updated python kernel in my vitual environment named nn form 3.7.9 to 3.8.5, however, I still find the old kernel standing in the jupyter kernel list. I want to know how to delete the old kernel name from the kernel list.
I've replaced python 3.7.9 and python3.6.4 with python 3.8.5, but the old kernels didn't disappear, I want to delete them manually.
Moreover, I can't select Python 3.8.5 from the kernel list.
I had the same problem and the following might help someone else encountering the issue:
Reload VS Code Window by Ctrl+Shift+P and selecting Reload Window.
Reload the Python and Jupyter extensions under the Extensions in the Side Bar.
Quit and relaunch VS Code.
It seems that VS Code is not that quick to update the interpreter list.
Here's a workaround: in the command palette, search for Python: Select interpreter. You then get a dropdown with a little refresh button in the top right corner. After you refresh this list the new interpreter will be listed as a kernel for jupyter.
It looks like you have fixed your issue already. But in case anyone else hits this, or a similar issue. VS Code jupyter support looks in the standard jupyter locations for any installed kernelspecs you can see those directories listed here:
https://jupyter.readthedocs.io/en/latest/use/jupyter-directories.html#data-files
VS Code should pick up anything that Jupyter could pick up. So if you happen to have jupyter installed in a python environment then from the commandline you can run jupyter kernelspec list to see a list of all the kernelspecs installed on the system.
Ok I figured it out. There are kernel register files in the directorry
.local/jupyter/kernels/pythonxxxx
I manually delete python379 and python364 then everything is totally right.
VScode for python runs perfectly, without any error, problems starts whenever I try to run Jupyter notebook inside VScode.
It starts with Ipython Kernel loading and then it shows Command Failed Error. Any fix for this ? I have no idea what's the problem and I don't know much about the environment and stuffs also.
Thank You.
From your picture, VSCode said Command failed, and it's a very long command. It mainly includes two parts: activate the conda base environment and change the vscode python environment through "Python" extension. And from the top right of the picture, it shows the jupyter server start failed.
So you can try to do two things:
First one: change the environment. Instead of using conda, download and install a global python from the official website. And recommend creating a virtual environment. Then select the environment instead of conda base environment.
Second one: reinstall or downgrade the 'Python' extension(if the first one not work).
This problem can be caused by the package in the environment, so I recommend you just change to another environment.
I am using VS Code in Windows 10.
I am able to use the dependencies in my conda environment if I Run the Python Script in Terminal. However, I am not able to use the environment in the Python Interactive shell.
For instance, I am using my datascienceenvironment which has the package fuzzywuzzy. I have included the env path into the settings.jsonas the python.pythonPath. But the Python version used in the Jupyter Notebook is the default anaconda base C:\\ProgramData\\Anaconda3\\python.exe
What is also extrange, is that if I run !conda list within the Notebook, I can see the fuzzywuzzy package.
What am I missing?
Thanks!
I'm a developer on the Interactive Windows. Priyatham has already pointed you in the right direction. Currently our Window tries to use the currently selected environment (the one in the lower left corner). But we didn't want to totally block customers if they didn't have Jupyter installed in each environment. So if the selected interpreter doesn't have Jupyter in the environment we'll check other environments on the system, looking for the closest python version match to the currently selected one. If we find something with Jupyter we'll launch the Interactive Window using that. In this case we do show a popup in the lower right indicating that we didn't find Jupyter and that we are falling back on a different environment, but this message can be pretty easy to miss.
I recently migrated from Spyder to VScode. I created a new conda environment and used setting.json to change the environment in VScode, "python.pythonPath": "/Users/dcai/anaconda3/envs/alphalens/bin/python"
However when I tried to run the code in Python Interactive, a different environment was loaded.
Is there a way for me to change the Python Interactive environment and match it to my terminal environment?
The Python Interactive window should be starting up using the Python version selected in the lower left corner of the VS Code IDE. This is the same environment that you can also pick via the Python: Select Interpreter command palette option. However the Python Interactive window does do one thing differently here. If the currently selected environment does not have jupyter installed it will look in the other environments for one that does and launch it, you should see a warning message in this case that a different environment was used.
Did this help answer your question? I'm a developer on this feature so I can help you debug if you are still seeing the wrong env launched.
I had the same situation as the OP. After reviewing #IanHuff's answer, that if desired (target) environment does not have Jupyter installed, the Python Interactive window will use another where it is found. I considered installing Jupyter in my target environment, but it would have installed a lot of packages. Having to do that for each virtual environment would be unnecessarily burdensome. So instead of the entire Jupyter package, I installed just the ipython_kernel in the target environment as follows and it worked:
$ ipython kernel install --user --name=<target_environment_name>
Hope this helps others trying to use Visual Studio Code with Jupyter Notebooks.