Two different /site-packages on macos - python

I want to use flask, I have installed it twice. I have two different site-packages directories for python.
/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/
/usr/local/lib/python3.7/site-packages
After installing pip I wanted to use it so I made an alias to the path
alias pip='/usr/local/bin/pip3.7'
having this I tried to install flask
pip install flask
This did install flask to:
/usr/local/lib/python3.7/site-packages/flask
But when I tried to use it within the python prompt
$ python
>>>import flask
I got an error for 'flask', the code wouldn't run. So I figured I would try installing it with sudo
sudo pip install flask
This then introduced me this path:
/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/
So this time when I tried to import flask, it worked!
$ python
>>> import flask
>>>
So, my question is which /site-packages directory should I alias pip to? I'm guessing should change to the Library/Frameworks one since that got my flask import working but I'm not sure.
Any information or recommendations on these two paths would be great, I'm new to the mac+python workflow.

Try this:
import sys
print(sys.path)
to see what you have in your Python. I suspect your pip and python does not match, e.g., one from homebrew and another come with macOS (which might make your module incompatible if they are compiled binaries). The above command prints where your python console will look for a module. If that doesn't fit where your pip will install to, try set up PYTHONPATH before running python, e.g., in bash
export PYTHONPATH=$PYTHONPATH:/usr/local/lib/python3.7/site-packages/
python

Related

Add external libraries (dependencies) and reference them correctly in my python code

I try the following code to see if the library sodium can be located
import ctypes
import ctypes.util
# Taken from line 33 https://github.com/bgaifullin/pysodium/blob/master/pysodium/__init__.py
o = ctypes.util.find_library('sodium')
print o
This always returns "none"
Please how do I add external libraries (dependencies) and reference them correctly in my python code.
EDIT:
I am trying to work with pysodium it has a dependency on libsodium
I have downloaded libsodium, but i'm new to python...
I'm actually using PTVS 2.1 to get up to speed running python in my familiar dev environment.
If I understood you correctly. What you want is to import a library.
Put the pysodium directory under the script you want to use and then simply do
import pysodium
It is as simple as that.
Usually, what you do is install the libraries on your system, or in a virtualenv, and import them to your python script. Cloning the repository will not generally help unless the libraries you want to import are in the same directory as the script you're importing from.
I, personally, would recommend using virtualenv and pip together hand in hand. Read up on virtualenv, it will come very handy.
Assuming you have both virtualenv and pip, all you need to do is the following
virtualenv venv
source venv/bin/activate
pip install pysodium
This should create a virtualenv container, activate it and install pysodium inside. Your script will only work when the virtualenv is activated. You can deactivate it using the command deactivate.

No module named found when installing Django

I used pip to install Django.
sudo pip install Django
It successfully works. However, when I tried to run python code.
import django
It shows No module found. And then I used pip freeze command to check the installation. Django is listed there!
pip freeze
Django==1.7
when I run which python, it shows:
which python
/Library/Frameworks/Python.framework/Versions/2.7/bin/python
So can anyone help me out? My computer OS is MAC OS 10.9.2
Solution:
From one friends suggestion(running again-sudo pip install django), I found the result reminds me that the django already exist in /usr/local/lib/python2.7/site-packages. And then recalling the result of system path:
import path
for p in sys.path: print p
I didn't find that directory, then I used the code below:
export PYTHONPATH=/usr/local/lib/python2.7/site-packages
It also works in this way:
import sys
sys.path.append('/usr/local/lib/python2.7/site-packages')
But all these two work temporarily. If we close the terminal, we still need to add it again.
Easy solution to all of your problems: virtualenv

Python ImportError while module is installed [Ubuntu]

I'd like to make a switch from Windows to Linux (Ubuntu) writing my python programs but I just can't get things to work. Here's the problem: I can see that there are quite the number of modules pre-installed (like numpy, pandas, matplotlib, etc.) in Ubuntu. They sit nicely in the /host/Python27/Lib/site-packages directory. But when I write a test python script and try to execute it, it gives me an ImportError whenever I try to import a module (for instance import numpy as np gives me ImportError: No module named numpy). When I type which python in the commandline I get the /usr/bin/python path. I think I might need to change things related to the python path, but I don't know how to do that.
You can use the following command in your terminal to see what folders are in your PYTHONPATH.
python -c "import sys, pprint; pprint.pprint(sys.path)"
I'm guessing /host/Python27/Lib/site-packages wont be in there (it doesn't sound like a normal python path. How did you install these packages?).
If you want to add folders to your PYTHONPATH then use the following:
export PYTHONPATH=$PYTHONPATH:/host/Python27/Lib/site-packages
Personally here are some recommendations for developing with Python:
Use virtualenv. It is a very powerful tool that creates sandboxed python environments so you can install modules and keep them separate from the main interpreter.
Use pip - When you've created a virtualenv, and activated it you can use pip install to install packages for you. e.g. pip install numpy will install numpy into your virtual environment and will be accessible from only this virtualenv. This means you can also install different versions for testing etc. Very powerful. I would recommend using pip to install your python packages over using ubuntu apt-get install as you are more likely to get the newer versions of modules (apt-get relies on someone packaging the latest versions of your python libraries and may not be available for as many libraries as pip).
When writing python scripts that you will make executable (chmod +x my_python_script.py) make sure you put #!/usr/bin/env python at the top as this will pick up the python interpreter in your virtual environment. If you don't (and put #!/usr/bin/python) then running ./my_python_script.py will always use the system python interpreter.
/host/Python27/Lib/site-packages is not a default python directory on linux installations as far as I am aware.
The normal python installation (and python packages) should be found under /usr/lib or /usr/lib64 depending on your processor architecture.
If you want to check where python is searching in addition to these directories you can use a terminal with the following command:
echo $PYTHONPATH
If the /host/Python27/Lib/site-packages path is not listed, attempt to use the following command and try it again:
export PYTHONPATH=$PYTHONPATH:host/Python27/Lib/site-packages
If this should work and you do not want to write this in a terminal every time you want to use these packages, simply put it into a file called .bashrc in your home folder (normally /home/<username>).
When installing other python libraries, specify the pip version you want to install it to, if it's python2 you use, then enter this syntax:
pip2 install <package>
For python3
pip3 install <package>

Unable to import a module that is definitely installed

After installing mechanize, I don't seem to be able to import it.
I have tried installing from pip, easy_install, and via python setup.py install from this repo: https://github.com/abielr/mechanize. All of this to no avail, as each time I enter my Python interactive I get:
Python 2.7.3 (default, Aug 1 2012, 05:14:39)
[GCC 4.6.3] on linux2
Type "help", "copyright", "credits" or "license" for more information.
>>> import mechanize
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
ImportError: No module named mechanize
>>>
The installations I ran previously reported that they had completed successfully, so I expect the import to work. What could be causing this error?
In my case, it is permission problem. The package was somehow installed with root rw permission only, other user just cannot rw to it!
I had the same problem: script with import colorama was throwing an ImportError, but sudo pip install colorama was telling me "package already installed".
My fix: run pip without sudo: pip install colorama. Then pip agreed it needed to be installed, installed it, and my script ran. Or even better, use python -m pip install <package>. The benefit of this is, since you are executing the specific version of python that you want the package in, pip will unequivocally install the package into the "right" python. Again, don't use sudo in this case... then you get the package in the right place, but possibly with (unwanted) root permissions.
My environment is Ubuntu 14.04 32-bit; I think I saw this before and after I activated my virtualenv.
I was able to correct this issue with a combined approach. First, I followed Chris' advice, opened a command line and typed 'pip show packagename'
This provided the location of the installed package.
Next, I opened python and typed 'import sys', then 'sys.path' to show where my python searches for any packages I import. Alas, the location shown in the first step was NOT in the list.
Final step, I typed 'sys.path.append('package_location_seen_in_step_1'). You optionally can repeat step two to see the location is now in the list.
Test step, try to import the package again... it works.
The downside? It is temporary, and you need to add it to the list each time.
It's the python path problem.
In my case, I have python installed in:
/Library/Frameworks/Python.framework/Versions/2.6/bin/python,
and there is no site-packages directory within the python2.6.
The package(SOAPpy) I installed by pip is located
/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/
And site-package is not in the python path, all I did is add site-packages to PYTHONPATH permanently.
Open up Terminal
Type open .bash_profile
In the text file that pops up, add this line at the end:
export PYTHONPATH=$PYTHONPATH:/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/
Save the file, restart the Terminal, and you're done
The Python import mechanism works, really, so, either:
Your PYTHONPATH is wrong,
Your library is not installed where you think it is
You have another library with the same name masking this one
I have been banging my head against my monitor on this until a young-hip intern told me the secret is to "python setup.py install" inside the module directory.
For some reason, running the setup from there makes it just work.
To be clear, if your module's name is "foo":
[burnc7 (2016-06-21 15:28:49) git]# ls -l
total 1
drwxr-xr-x 7 root root 118 Jun 21 15:22 foo
[burnc7 (2016-06-21 15:28:51) git]# cd foo
[burnc7 (2016-06-21 15:28:53) foo]# ls -l
total 2
drwxr-xr-x 2 root root 93 Jun 21 15:23 foo
-rw-r--r-- 1 root root 416 May 31 12:26 setup.py
[burnc7 (2016-06-21 15:28:54) foo]# python setup.py install
<--snip-->
If you try to run setup.py from any other directory by calling out its path, you end up with a borked install.
DOES NOT WORK:
python /root/foo/setup.py install
DOES WORK:
cd /root/foo
python setup.py install
I encountered this while trying to use keyring which I installed via sudo pip install keyring. As mentioned in the other answers, it's a permissions issue in my case.
What worked for me:
Uninstalled keyring:
sudo pip uninstall keyring
I used sudo's -H option and reinstalled keyring:
sudo -H pip install keyring
In PyCharm, I fixed this issue by changing the project interpreter path.
File -> Settings -> Project -> Project Interpreter
File -> Invalidate Caches… may be required afterwards.
I couldn't get my PYTHONPATH to work properly. I realized adding export fixed the issue:
(did work)
export PYTHONPATH=$PYTHONPATH:~/test/site-packages
vs.
(did not work)
PYTHONPATH=$PYTHONPATH:~/test/site-packages
This problem can also occur with a relocated virtual environment (venv).
I had a project with a venv set up inside the root directory. Later I created a new user and decided to move the project to this user. Instead of moving only the source files and installing the dependencies freshly, I moved the entire project along with the venv folder to the new user.
After that, the dependencies that I installed were getting added to the global site-packages folder instead of the one inside the venv, so the code running inside this env was not able to access those dependencies.
To solve this problem, just remove the venv folder and recreate it again, like so:
$ deactivate
$ rm -rf venv
$ python3 -m venv venv
$ source venv/bin/activate
$ pip install -r requirements.txt
Something that worked for me was:
python -m pip install -user {package name}
The command does not require sudo. This was tested on OSX Mojave.
In my case I had run pip install Django==1.11 and it would not import from the python interpreter.
Browsing through pip's commands I found pip show which looked like this:
> pip show Django
Name: Django
Version: 1.11
...
Location: /usr/lib/python3.4/site-packages
...
Notice the location says '3.4'. I found that the python-command was linked to python2.7
/usr/bin> ls -l python
lrwxrwxrwx 1 root root 9 Mar 14 15:48 python -> python2.7
Right next to that I found a link called python3 so I used that. You could also change the link to python3.4. That would fix it, too.
In my case it was a problem with a missing init.py file in the module, that I wanted to import in a Python 2.7 environment.
Python 3.3+ has Implicit Namespace Packages that allow it to create a packages without an init.py file.
Had this problem too.. the package was installed on Python 3.8.0 but VS Code was running my script using an older version (3.4)
fix in terminal:
py .py
Make sure you're installing the package on the right Python Version
I had colorama installed via pip and I was getting "ImportError: No module named colorama"
So I searched with "find", found the absolute path and added it in the script like this:
import sys
sys.path.append("/usr/local/lib/python3.8/dist-packages/")
import colorama
And it worked.
I had just the same problem, and updating setuptools helped:
python3 -m pip install --upgrade pip setuptools wheel
After that, reinstall the package, and it should work fine :)
The thing is, the package is built incorrectly if setuptools is old.
If the other answers mentioned do not work for you, try deleting your pip cache and reinstalling the package. My machine runs Ubuntu14.04 and it was located under ~/.cache/pip. Deleting this folder did the trick for me.
Also, make sure that you do not confuse pip3 with pip. What I found was that package installed with pip was not working with python3 and vice-versa.
I had similar problem (on Windows) and the root cause in my case was ANTIVIRUS software! It has "Auto-Containment" feature, that wraps running process with some kind of a virtual machine.
Symptoms are: pip install somemodule works fine in one cmd-line window and import somemodule fails when executed from another process with the error
ModuleNotFoundError: No module named 'somemodule'
In my case (an Ubuntu 20.04 VM on WIN10 Host), I have a disordered situation with many version of Python installed and variuos point of Shared Library (installed with pip in many points of the File System). I'm referring to 3.8.10 Python version.
After many tests, I've found a suggestion searching with google (but' I'm sorry, I haven't the link). This is what I've done to resolve the problem :
From shell session on Ubuntu 20.04 VM, (inside the Home, in my case /home/hduser), I've started a Jupyter Notebook session with the command "jupyter notebook".
Then, when jupyter was running I've opened a .ipynb file to give commands.
First : pip list --> give me the list of packages installed, and, sympy
wasn't present (although I had installed it with "sudo pip install sympy"
command.
Last with the command !pip3 install sympy (inside jupyter notebook
session) I've solved the problem, here the screen-shot :
Now, with !pip list the package "sympy" is present, and working :
In my case, I assumed a package was installed because it showed up in the output of pip freeze. However, just the site-packages/*.dist-info folder is enough for pip to list it as installed despite missing the actual package contents (perhaps from an accidental deletion). This happens even when all the path settings are correct, and if you try pip install <pkg> it will say "requirement already satisfied".
The solution is to manually remove the dist-info folder so that pip realizes the package contents are missing. Then, doing a fresh install should re-populate anything that was accidentally removed
When you install via easy_install or pip, is it completing successfully? What is the full output? Which python installation are you using? You may need to use sudo before your installation command, if you are installing modules to a system directory (if you are using the system python installation, perhaps). There's not a lot of useful information in your question to go off of, but some tools that will probably help include:
echo $PYTHONPATH and/or echo $PATH: when importing modules, Python searches one of these environment variables (lists of directories, : delimited) for the module you want. Importing problems are often due to the right directory being absent from these lists
which python, which pip, or which easy_install: these will tell you the location of each executable. It may help to know.
Use virtualenv, like #JesseBriggs suggests. It works very well with pip to help you isolate and manage the modules and environment for separate Python projects.
I had this exact problem, but none of the answers above worked. It drove me crazy until I noticed that sys.path was different after I had imported from the parent project. It turned out that I had used importlib to write a little function in order to import a file not in the project hierarchy. Bad idea: I forgot that I had done this. Even worse, the import process mucked with the sys.path--and left it that way. Very bad idea.
The solution was to stop that, and simply put the file I needed to import into the project. Another approach would have been to put the file into its own project, as it needs to be rebuilt from time to time, and the rebuild may or may not coincide with the rebuild of the main project.
I had this problem with 2.7 and 3.5 installed on my system trying to test a telegram bot with Python-Telegram-Bot.
I couldn't get it to work after installing with pip and pip3, with sudo or without. I always got:
Traceback (most recent call last):
File "telegram.py", line 2, in <module>
from telegram.ext import Updater
File "$USER/telegram.py", line 2, in <module>
from telegram.ext import Updater
ImportError: No module named 'telegram.ext'; 'telegram' is not a package
Reading the error message correctly tells me that python is looking in the current directory for a telegram.py. And right, I had a script lying there called telegram.py and this was loaded by python when I called import.
Conclusion, make sure you don't have any package.py in your current working dir when trying to import. (And read error message thoroughly).
I had a similar problem using Django. In my case, I could import the module from the Django shell, but not from a .py which imported the module.
The problem was that I was running the Django server (therefore, executing the .py) from a different virtualenv from which the module had been installed.
Instead, the shell instance was being run in the correct virtualenv. Hence, why it worked.
This Works!!!
This often happens when module is installed to an older version of python or another directory, no worries as solution is simple.
- import module from directory in which module is installed.
You can do this by first importing the python sys module then importing from the path in which the module is installed
import sys
sys.path.append("directory in which module is installed")
import <module_name>
Most of the possible cases have been already covered in solutions, just sharing my case, it happened to me that I installed a package in one environment (e.g. X) and I was importing the package in another environment (e.g. Y). So, always make sure that you're importing the package from the environment in which you installed the package.
For me it was ensuring the version of the module aligned with the version of Python I was using.. I built the image on a box with Python 3.6 and then injected into a Docker image that happened to have 3.7 installed, and then banging my head when Python was telling me the module wasn't installed...
36m for Python 3.6
bsonnumpy.cpython-36m-x86_64-linux-gnu.so
37m for Python 3.7 bsonnumpy.cpython-37m-x86_64-linux-gnu.so
I know this is a super old post but for me, I had an issue with a 32 bit python and 64 bit python installed. Once I uninstalled the 32 bit python, everything worked as it should.
I have solved my issue that same libraries were working fine in one project(A) but importing those same libraries in another project(B) caused error. I am using Pycharm as IDE at Windows OS.
So, after trying many potential solutions and failing to solve the issue, I did these two things (deleted "Venv" folder, and reconfigured interpreter):
1-In project(B), there was a folder named("venv"), located in External Libraries/. I deleted that folder.
2-Step 1 (deleting "venv" folder) causes error in Python Interpreter Configuration, and
there is a message shown at top of screen saying "Invalid python interpreter selected
for the project" and "configure python interpreter", select that link and it opens a
new window. There in "Project Interpreter" drop-down list, there is a Red colored line
showing previous invalid interpreter. Now, Open this list and select the Python
Interpreter(in my case, it is Python 3.7). Press "Apply" and "OK" at the bottom and you
are good to go.
Note: It was potentially the issue where Virtual Environment of my Project(B) was not recognizing the already installed and working libraries.

python virtualenv ImportError No module named inspect time flask

I recently deleted some old development folders off my disk, and now one of my virtualenv projects doesn't work. I noticed the problem when I tried to import flask.
I am using Ubuntu and I was using python2.7 in the virtualenv instead of python2.6 which is the default python.
I will describe how I fixed it, but I was wanting to know if there was a better way.
fyi I use bash in the terminal by default...
download source from http://www.python.org/download/releases/2.7/
move source file into /project/src/dir and extract
change the working directory of the terminal to the newly extracted directory
configure and make
mkdir python2.7
./configure --prefix=/project/src/dir/python2.7
make
make install
create virtualenv and specify python to use
virtualenv --no-site-packages -p /project/src/dir/python2.7/bin/python2.7 projectname
enter the virtual environment
cd projectname
source bin/activate
get flask if you want it
pip install flask
test to see if we can import time and inspect
(bash)
python
(python shell)
import time
import inspect
test to see if we can import flask
import flask
Perhaps you were using --system-site-packages before hand and flask was available via a path external to your VirtualEnv.
Keep in mind that older versions of VirtualEnv were not very relocatable either if they moved at all.

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