group by pandas removes duplicates - python

I have a dataframe (df)
a b c
1 2 20
1 2 15
2 4 30
3 2 20
3 2 15
and I want to recognize only max values from column c
I tried
a = df.loc[df.groupby('b')['c'].idxmax()]
but it group by removes duplicates so I get
a b c
1 2 20
2 4 30
it removes rows 3 because they are the same was rows 1.
Is it any way to write the code to not remove duplicates?

Just also take column a into account when you do the groupby:
a = df.loc[df.groupby(['a', 'b'])['c'].idxmax()]
a b c
0 1 2 20
2 2 4 30
3 3 2 20

I think you need:
df = df[df['c'] == df.groupby('b')['c'].transform('max')]
print (df)
a b c
0 1 2 20
2 2 4 30
3 3 2 20
Difference in changed data:
print (df)
a b c
0 1 2 30
1 1 2 30
2 1 2 15
3 2 4 30
4 3 2 20
5 3 2 15
#only 1 max rows per groups a and b
a = df.loc[df.groupby(['a', 'b'])['c'].idxmax()]
print (a)
a b c
0 1 2 30
3 2 4 30
4 3 2 20
#all max rows per groups b
df1 = df[df['c'] == df.groupby('b')['c'].transform('max')]
print (df1)
a b c
0 1 2 30
1 1 2 30
3 2 4 30
#all max rows per groups a and b
df2 = df[df['c'] == df.groupby(['a', 'b'])['c'].transform('max')]
print (df2)
a b c
0 1 2 30
1 1 2 30
3 2 4 30
4 3 2 20

Related

Remove groups from dataframe where a min value within that group is not below a threshold

The dataframe looks like this:
id1 id2 value
1 1 35
1 1 23
1 1 20
1 2 5
1 2 50
2 1 42
2 1 3
2 1 12
2 2 64
2 3 34
2 3 1
I want to group them by id1 and id2, and remove all rows of a group if the minimum value of that group is not less than 10.
So the result would look like this:
id1 id2 value
1 2 5
1 2 50
2 1 3
2 1 12
2 3 34
2 3 1
I have tried this:
dfmin = df.groupby(["id1", "id2"])["value"].min().reset_index()
df = df[
dfmin.loc[
(dfmin["id1"] == df["id1"]) & (dfmin["id1"] == df["id1"]),
"value",
].iat[0]
< 10
]
But I get the error Can only compare identically-labeled Series objects.
What am I doing wrong and is there a better way?
use groupby filter
out = df.groupby(['id1', 'id2']).filter(lambda x: x['value'].min() < 10)
out
id1 id2 value
3 1 2 5
4 1 2 50
5 2 1 42
6 2 1 3
7 2 1 12
9 2 3 34
10 2 3 1

How to create a new column that increments within a subgroup of a group in Python?

I have a problem where I need to group the data by two groups, and attach a column that sort of counts the subgroup.
Example dataframe looks like this:
colA colB
1 a
1 a
1 c
1 c
1 f
1 z
1 z
1 z
2 a
2 b
2 b
2 b
3 c
3 d
3 k
3 k
3 m
3 m
3 m
Expected output after attaching the new column is as follows:
colA colB colC
1 a 1
1 a 1
1 c 2
1 c 2
1 f 3
1 z 4
1 z 4
1 z 4
2 a 1
2 b 2
2 b 2
2 b 2
3 c 1
3 d 2
3 k 3
3 k 3
3 m 4
3 m 4
3 m 4
I tried the following but I cannot get this trivial looking problem solved:
Solution 1 I tried that does not give what I am looking for:
df['ONES']=1
df['colC']=df.groupby(['colA','colB'])['ONES'].cumcount()+1
df.drop(columns='ONES', inplace=True)
I also played with transform, and cumsum functions, and apply, but I cannot seem to solve this. Any help is appreciated.
Edit: minor error on dataframes.
Edit 2: For simplicity purposes, I showed similar values for column B, but the problem is within a larger group (indicated by colA), colB may be different and therefore, it needs to be grouped by both at the same time.
Edit 3: Updated dataframes to emphasize what I meant by my second edit. Hope this makes it more clear and reproduceable.
You could use groupby + ngroup:
df['colC'] = df.groupby('colA').apply(lambda x: x.groupby('colB').ngroup()+1).droplevel(0)
Output:
colA colB colC
0 1 a 1
1 1 a 1
2 1 c 2
3 1 c 2
4 1 f 3
5 1 z 4
6 1 z 4
7 1 z 4
8 2 a 1
9 2 b 2
10 2 b 2
11 2 b 2
12 3 c 1
13 3 d 2
14 3 k 3
15 3 k 3
16 3 m 4
17 3 m 4
18 3 m 4
Categorically, factorize
df['colC'] =df['colB'].astype('category').cat.codes+1
colA colB colC
0 1 a 1
1 1 a 1
2 1 b 2
3 1 b 2
4 1 c 3
5 1 d 4
6 1 d 4
7 1 d 4
8 2 a 1
9 2 b 2
10 2 b 2
11 2 b 2
12 3 a 1
13 3 b 2
14 3 c 3
15 3 c 3
16 3 d 4
17 3 d 4
18 3 d 4

python pandas: Remove duplicates by columns A, which is not satisfying a condition in column B

I have a dataframe with repeat values in column A. I want to drop duplicates, keeping the row which has its value > 0 in column B
So this:
A B
1 20
1 10
1 -3
2 30
2 -9
2 40
3 10
Should turn into this:
A B
1 20
1 10
2 30
2 40
3 10
Any suggestions on how this can be achieved? I shall be grateful!
In sample data are not duplciates, so use only:
df = df[df['B'].gt(0)]
print (df)
A B
0 1 20
1 1 10
3 2 30
5 2 40
6 3 10
If there are duplicates:
print (df)
A B
0 1 20
1 1 10
2 1 10
3 1 10
4 1 -3
5 2 30
6 2 -9
7 2 40
8 3 10
df = df[df['B'].gt(0) & ~df.duplicated()]
print (df)
A B
0 1 20
1 1 10
5 2 30
7 2 40
8 3 10

Run calculations on list of selected columns [duplicate]

With the DataFrame below as an example,
In [83]:
df = pd.DataFrame({'A':[1,1,2,2],'B':[1,2,1,2],'values':np.arange(10,30,5)})
df
Out[83]:
A B values
0 1 1 10
1 1 2 15
2 2 1 20
3 2 2 25
What would be a simple way to generate a new column containing some aggregation of the data over one of the columns?
For example, if I sum values over items in A
In [84]:
df.groupby('A').sum()['values']
Out[84]:
A
1 25
2 45
Name: values
How can I get
A B values sum_values_A
0 1 1 10 25
1 1 2 15 25
2 2 1 20 45
3 2 2 25 45
In [20]: df = pd.DataFrame({'A':[1,1,2,2],'B':[1,2,1,2],'values':np.arange(10,30,5)})
In [21]: df
Out[21]:
A B values
0 1 1 10
1 1 2 15
2 2 1 20
3 2 2 25
In [22]: df['sum_values_A'] = df.groupby('A')['values'].transform(np.sum)
In [23]: df
Out[23]:
A B values sum_values_A
0 1 1 10 25
1 1 2 15 25
2 2 1 20 45
3 2 2 25 45
I found a way using join:
In [101]:
aggregated = df.groupby('A').sum()['values']
aggregated.name = 'sum_values_A'
df.join(aggregated,on='A')
Out[101]:
A B values sum_values_A
0 1 1 10 25
1 1 2 15 25
2 2 1 20 45
3 2 2 25 45
Anyone has a simpler way to do it?
This is not so direct but I found it very intuitive (the use of map to create new columns from another column) and can be applied to many other cases:
gb = df.groupby('A').sum()['values']
def getvalue(x):
return gb[x]
df['sum'] = df['A'].map(getvalue)
df
In [15]: def sum_col(df, col, new_col):
....: df[new_col] = df[col].sum()
....: return df
In [16]: df.groupby("A").apply(sum_col, 'values', 'sum_values_A')
Out[16]:
A B values sum_values_A
0 1 1 10 25
1 1 2 15 25
2 2 1 20 45
3 2 2 25 45

Python, pandas, cumulative sum in new column on matching groups

If I have these columns in a dataframe:
a b
1 5
1 7
2 3
1,2 3
2 5
How do I create column c where column b is summed using groupings of column a (string), keeping the existing dataframe. Some rows can belong to more than one group.
a b c
1 5 15
1 7 15
2 3 11
1,2 3 26
2 5 11
Is there an easy and efficient solution as the dataframe I have is very large.
You can first need split column a and join it to original DataFrame:
print (df.a.str.split(',', expand=True)
.stack()
.reset_index(level=1, drop=True)
.rename('a'))
0 1
1 1
2 2
3 1
3 2
4 2
Name: a, dtype: object
df1 = df.drop('a', axis=1)
.join(df.a.str.split(',', expand=True)
.stack()
.reset_index(level=1, drop=True)
.rename('a'))
print (df1)
b a
0 5 1
1 7 1
2 3 2
3 3 1
3 3 2
4 5 2
Then use transform for sum without aggragation.
df1['c'] = df1.groupby(['a'])['b'].transform(sum)
#cast for aggreagation join working with strings
df1['a'] = df1.a.astype(str)
print (df1)
b a c
0 5 1 15
1 7 1 15
2 3 2 11
3 3 1 15
3 3 2 11
4 5 2 11
Last groupby by index and aggregate columns by agg:
print (df1.groupby(level=0)
.agg({'a':','.join,'b':'first' ,'c':sum})
[['a','b','c']] )
a b c
0 1 5 15
1 1 7 15
2 2 3 11
3 1,2 3 26
4 2 5 11

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