Fully connected layer for each channel individually in tensorflow - python

Is there a way to apply a different dense layer to each channel of the input?
I.e. having a input tensor of [batch,height,width,channels] I would like to apply a different dense layer to each channel, thus having #channels layers, each with a input of height*width.
From tensorflow dense docs I see that
Note: that if inputs have a rank greater than 2, then inputs is flattened prior to the initial matrix multiply by weights.
which is not the desired outcome in this situation.

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Neural network hidden layer vs. Convolutional hidden layer intuition

If there are 10 features and 1 output class (sigmoid activation) with a regression objective:
If I use only 5 neurons in my first dense hidden layer: will the first error be calculated solely based on half of the training feature set? Isn't it imperative to match the # of features with the neurons in hidden layer #1 so that the model can see all the features at once? Otherwise it's not getting the whole picture? The first fwd propagation iteration would use 5 out of 10 features, and get the error value (and train during backprop, assume batch grad descent). Then the 2nd fwd propagation iteration would see the remaining 5 out of 10 features with updated weights and hopefully arrive at a smaller error. BUT its only seeing half the features at a time!
Conversely, if I have a convolutional 2D layer of 64 neurons. And my training shape is: (100, 28,28,1) (pictures of cats and dogs in greyscale), will each of the 64 neurons see a different 28x28 vector? No right, because it can only send one example through the forward propagation at a time? So then only a single picture (cat or dog) should be spanned across the 64 neurons? Why would you want that since each neuron in that layer has the same filter, stride, padding and activation function? When you define a Conv2D layer...the parameters of each neuron are the same. So is only a part of the training example going into each neuron? Why have 64 neurons, for example? Just have one neuron, use a filter on it and pass it along to a second hidden layer with another filter with different parameters!
Please explain the flaws in my logic. Thanks so much.
EDIT: I just realized for Conv2D, you flatten the training data sets so it becomes a 1D vector and so a 28x28 image would mean having an input conv2d layer of 724 neurons. But I am still confused for the dense neural network (paragraph #1 above)
What is your "first" layer?
Normally you have an input layer as first layer, which does not contain any weights.
The shape of the input layer must match the shape of your feature data.
So basically when you train a model with 10 features, but only have a input layer of shape (None,5) (where none stands for the batch_size), tensorflow will raise an exception, because it needs data for all inputs in the correct shape.
So what you said is just not going to happen. If you only have 5 features, the next 5 features wont be fit into the net in the next iteration but, the next sample will be send to the model instead. (Lets say no exception is thrown) So of the next sample also only the first 5 features would be used.
What you can do instead, use a input_layer as first layer with the correct shape of your features. Then as secodn layer, you can use any shape you like, 1,10,100 dense neurons, its up to you (and what works well of course). The shape of the output again must match (this time) the shape of your label data.
I hope this makes it more clear

Is it possible to see the output after Conv2D layer in Keras

I am trying to understand each layer of Keras while implementing CNN.
In Conv2D layer i understand that it creates different convolution layer depending on various feature map values.
Now, My question is that
Can i see different feature map matrix that are applied on input image to get the convolution layer
Can i see the value of matrix that is generated after completion of Conv2D step.
Thanks in advance
You can get the output of a certain convolutional layer in this way:
import keras.backend as K
func = K.function([model.get_layer('input').input], model.get_layer('conv').output)
conv_output = func([numpy_input]) # numpy array
where 'input' and 'conv' denote the names of your input layer and convolutional layer. And you can get the weights of a certain layer like this:
conv_weights = model.get_layer('conv').get_weights() # numpy array

Is it possible to implement a max pooling layer in Keras which provides the maximum n values from a given pool size?

I have a multidimensional time series dataset which has the following shape (n_samples, 512, 9) where 512 is the timesteps and 9 are the channels.
After the first 1D CNN layer with 64 kernels my output shape is (n_samples, 512, 64). Now I would like to have my input to next layer which is an LSTM to be of the shape (n_samples, 384, 64).
It can be achieved if I have a Maxpool layer that returns maximum 3 values from pool size of 4 but is it possible to implement this in Keras?
You can probably solve this with a keras.layers.Lambda layer, and the backend to tf.nn.in_top_k. Note that the handling is somewhat different from tf.nn.top_k, in that it does not pool if all the values are of the same value!
Now you can define yourself a function that returns the top k values (and does so
somewhat efficiently), and then pass it as a function to the lambda layer.
I sadly haven't worked enough with Keras to type out the specific code, but maybe this is help enough to point you in the right direction.
Also, there exists a similar thread for TensorFlow specifically.

Keras: feed images into CNN and get image output

So far, I've been practicing neural networks on numerical datasets in pandas, but now I need to create a model that will take an image as input and output a binary mask of that image.
I have my training data as numpy arrays of shape (602, 2048, 2048, 1). 602 images of dimensions 2048x2048 with one channel. The array of output masks have the same dimensions.
What I can't figure out is how to define the first layer or how to correctly feed the data into the model. I would greatly appreciate your help on this issue
Well, this is not a "rule", but probably you will be using mostly 2D conv and related layers.
You feed everything as numpy arrays, as usual, maybe normalizing the values. Common options are:
Between 0 and 1 (just divide by 255.)
Between -1 and 1 (divide by 255., multiply by 2, subtract 1)
Caffe style: subtract from each channel a specific value to "center" the values based on their usual mean without rescaling them.
Your model should start with something like:
inputTensor = Input((2048,2048,1))
output = Conv2D(filters, kernel_size, .....)(inputTensor)
Or, in sequential models: model.add(Conv2D(...., input_shape=(2048,2048,1))
Later, it's up to you to decide which layers to use.
Conv2D
MaxPooling2D
Upsampling2D
Whether you're going to create a linear model or if you're going to divide branches, join branches, etc. is also your call.
Models in a U-Net style should be a good start for you.
What you can't do:
Don't use Flatten layers (actually you can, if you later reshape the output for having image dimensions... but why?)
Don't use Global Pooling layers (you don't want to sacrifice your spatial dimensions)

How to implement 1-D deconvolutional layer with a stride larger than one by tensorflow?

As this guide said [A guide to convolution arithmetic for deep learning], a deconvolutional layer can be transformed into an equivalent convolutional layer.
However, when the original convolution has a stride larger than one, the corresponded equivalent convolution of deconvolution should take a stretched input obtained by adding s−1 zeros between each input unit, where s is the stride in the original convolution.
Here is an example:
[The transpose of convolving a 3×3 kernel over a 5×5 input padded with a 1×1 border of zeros using 2×2 strides]
Here is the problem: because tensorflow only provides a 2-D version deconvolutional layer, if I want to implement a 1-D deconvolutional layer for an original convolutional layer with a stride larger than one, how can I add zeros between each input unit?
Thanks very much
I just found that the convolutional layer in keras has a parameter called dilation_rate, and it can cover my requirement.

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