Just installed a package through anaconda (conda install graphviz), but ipython wouldn't find it.
I can see a graphviz folder in C:\Users\username\Anaconda\pkgs
But there's nothing in: C:\Users\username\Anaconda\Lib\site-packages
The graphviz conda package is no Python package. It simply puts the graphviz files into your virtual env's Library/ directory. Look e.g. for dot.exe in the Library/bin/ directory.
To install the graphviz Python package, you can use pip:
conda install pip and pip install graphviz.
Always prefer conda packages if they are available over pip packages. Search for the package you need (conda search pkgxy) and then install it (conda install pkgxy). If it is not available, you can always build your own conda packages or you can try anaconda.org for user-built packages.
Update Nov 25, 2018: There exists now a python-graphviz package at Anaconda.org which contains the Python interface for the graphviz tool. Simply install it with conda install python-graphviz.
(Thanks to wedran and g-kaklam for posting this solution and to endolith for notifying me).
Update May 26, 2022: According to the pygraphviz website, the conda-forge channel should be used: conda install -c conda-forge pygraphviz (thanks to ian-thompson)
On conda:
First install
conda install graphviz
Then the python-library for graphviz python-graphviz
gv_python is a dynamically loaded extension for python that provides
access to the graph facilities of graphviz.
conda install python-graphviz
There is also pydot package, which can parse and dump into DOT language, used by GraphViz
conda install pydot
for me the problem was solved by installing another supportive package.
so I installed graphviz package through anaconda
then I failed to import it
after that I installed a second package named python-graphviz also through anaconda
then I succeeded in importing graphviz module into my code
I hope this will help someone :)
You can actually install both packages at the same time. For me:
conda install -c anaconda graphviz python-graphviz
did the trick.
To install graphviz,
conda install -c anaconda graphviz
pip install graphviz
If conda command not found. Follow these:
export PATH=~/anaconda/bin:$PATH
conda --version # to check your conda version
Difference between conda and pip installation,refer this stackoverflow answer
I have followed the following steps and it worked fine for me.
1 . Download and install graphviz-2.38.msi from
https://graphviz.gitlab.io/_pages/Download/Download_windows.html
2 . Set the path variable
(a) Control Panel > System and Security > System > Advanced System Settings > Environment Variables > Path > Edit
(b) add 'C:\Program Files (x86)\Graphviz2.38\bin'
Graphviz is evidently included in Anaconda so as to be used with pydot or pydot-ng (both of which are included in Anaconda). You may want to consider using one of those instead of the 'graphviz' Python module.
For ubuntu users I recommend this way:
sudo apt-get install -y graphviz libgraphviz-dev
Remeber！ If you are using jupyter notebook, please restart it after the installing. That's work for me.
Because the condition before is a static variate as below:
Check if tensorflow is activated in your terminal
first deactivate it using
conda deactivate
then use the command
conda install python-graphviz
and then install
conda install graphviz
this is solution for UBUNTU USERS :) CHEERS :)
This command works officially for python:
conda install -c conda-forge python-graphviz
run this:
conda install python-graphviz
I am using anaconda for the same.
I installed graphviz using conda install graphviz in anaconda prompt.
and then installed pip install graphviz in the same command prompt. It worked for me.
I tried this way and worked for me.
conda install -c anaconda graphviz
pip install graphviz
Related
If I have a directory with setup.py, in pip, I can pip install . in the directory to install the package.
What if I am using conda?
conda install . makes conda to find a package named dot.
conda packages are a different structure than standard python packaging. As a result, the official, recommended and best-practice approach is to use conda to install pip within an activated conda environment, and use that to install standard packages:
conda install pip
NOTE: You want to use conda packages whenever they're available, as they have more features within a conda environment than non-conda packages.
conda install pip will install pip within the currently activated conda environment, and will ensure that it is integrated with conda so that, for example, conda list, will include any packages installed with pip.
NOTE: Commands like conda update will ignore pip installed packages, as it only checks conda channels for available updates, so they still need to be updated using pip. See this Question/Answer discussion:
Does conda update packages from pypi installed using pip install?
NOTE: See #kalefranz comment below regarding conda 4.6 experimental handling of packages.
If you're interested in creating your own conda package(s), take a look at this question/1st answer for a great run-down:
How to install my own python module (package) via conda and watch its changes
If you simply wish to install non-conda packages, using pip is the correct, and expected, way to go.
You can use pip install from within conda environment.
Just activate your environment using:
$ conda activate myenvironment
and use pip install . to install your package in environment's directory.
EDIT: As pointed by Chris Larson in another answert, you should install pip inside the environment using
$ conda install pip
in order to register packages correctly.
If I have a whl file, I can use pip install xxx.whl to install it.
From the documentation, conda install from a local file is also available, but the file should be a tarball file, i.e. .tar.bz2 files.
conda install /package-path/package-filename.tar.bz2 works. And if I have multiple tarballs, I can tar them to get a .tar file, then conda install /packages-path/packages-filename.tar installs the packages in it.
I have install py-xgboost from anaconda using:
conda install py-xgboost
where it is shown up when I run
conda list
conda env export
But from pip it doesnt show up:
pip freeze
Is there a way to make pip able to 'see' xg-boost that is installed from a conda package? The reason I need this is because I need speedml which has a dependency on xg-boost and speedml is only available to me from pip (the enterprise anaconda repo do not have speedml).
Thanks!!
This can actually be solved by using
--no-deps
as described in this SO question
So for example what I need is speedml but it requires xgboost then I create the conda environment, installed py-xgboostm, and run the following in same conda env.:
pip install speedml --no-dependencies
And afterwards speedml works!
What is the exact command for installation of the python iexfinance package when using the Anaconda command prompt? Using the pip commands mentioned under "install" here does not work. https://pypi.python.org/pypi/iexfinance
It seems this package is not available through anaconda distribution.
Usually, besides the conda install <package> command, you have the alternative:
conda install -c conda-forge <package>
In your case, you can create a conda environment:
conda create --name <yourenv> python=3.5
then source activate <yourenv>,
and inside this environment you install your package, like so:
pip3 install iexfinance
then proceed to install other packages with conda install <package> as you see fit.
Can conda install be used to install source-distributions (i.e. non-archived import packages that have a setup.py)?
Yes and no. You can not conda install per se. However, as the Conda documentation says, Conda ships with pip, so you should be able to pip install -e . your package. You can also install with traditional python setup.py [install|develop].
Remember to activate your Conda environment before installation if you're using one instead of site packages.
As mentioned by vaiski, you can use pip and/or setup.py to build and install the package, but this method is not ideal because packages installed with pip and conda do not respect each other's dependencies.
Thus, if the source distribution includes a conda build recipe (meta.yaml), then you can created the anaconda archive on your own machine by using the conda-build tool:
$ conda build meta.yaml
Afterwards, you will have a local tar.gz of the build package with meta-data that conda can understand. This is what you download from the internet whenever you install a package using conda.
Finally, you can install the package you built locally using:
$ conda install --use-local
I execute the code following on my machine( Win10, python 2.7, Anaconda&Spyder) and meet ImportError: No module named pydotplus .
import networkx as nx
from networkx.drawing.nx_pydot import write_dot
G = nx.DiGraph([(1,2),(2,3),(3,2)])
write_dot(G,'file.dot')
It clearly that I should install pydotplus package. I try to conda install pydotplus directly but says Error: Package missing in current win-64 channels. Then, I google it but find there is no information about how to install it on conda. By the way, I have install pydot on conda before.
Thanks for you help in advance!
Using conda install command below worked for me (globally installed):
conda install -c conda-forge pydotplus
Using Anaconda environments (per environment instance) you can install pydotplus using pip:
pip install pydotplus
I would personally recommend using the Anaconda environments to install your packages for a given solution as its a more modular and cleaner way of building solutions with Anaconda.
Installing via Anaconda environments referenced from answer on Quora, see:
https://www.quora.com/How-do-I-install-Python-packages-in-Anaconda
I tried conda install pydotplus, but it failed.
Then tried python -m pip install pydotplus and it worked.
Try
pip install pydotplus
if it isn't part of the conda universe.
Open Anaconda prompt:
pip install pydotplus