Dask Multiprocessing - python

I am trying to run the following code. It works if executed in a shell but crashes if executed as macro (py macro.py). Please could you tell me what's wrong.
Thank you
import os
import sys
import dask
from dask.distributed import Client
def inc(x):
return x + 1
def add(x, y):
return x + y
client = Client(n_workers=2, threads_per_worker=2, memory_limit='1GB')
a = client.submit(inc, 10)
b = client.submit(inc, 20)
print(a.result())
print(b.result())

This is a problem with running scripts that create processes. You need to create your Client object within the if __name__ == "__main__": block
See the answer in where to put freeze_support() in a Python script? for more information.

Related

Python Multiprocessing workflow troubleshooting [duplicate]

I am trying my very first formal python program using Threading and Multiprocessing on a windows machine. I am unable to launch the processes though, with python giving the following message. The thing is, I am not launching my threads in the main module. The threads are handled in a separate module inside a class.
EDIT: By the way this code runs fine on ubuntu. Not quite on windows
RuntimeError:
Attempt to start a new process before the current process
has finished its bootstrapping phase.
This probably means that you are on Windows and you have
forgotten to use the proper idiom in the main module:
if __name__ == '__main__':
freeze_support()
...
The "freeze_support()" line can be omitted if the program
is not going to be frozen to produce a Windows executable.
My original code is pretty long, but I was able to reproduce the error in an abridged version of the code. It is split in two files, the first is the main module and does very little other than import the module which handles processes/threads and calls a method. The second module is where the meat of the code is.
testMain.py:
import parallelTestModule
extractor = parallelTestModule.ParallelExtractor()
extractor.runInParallel(numProcesses=2, numThreads=4)
parallelTestModule.py:
import multiprocessing
from multiprocessing import Process
import threading
class ThreadRunner(threading.Thread):
""" This class represents a single instance of a running thread"""
def __init__(self, name):
threading.Thread.__init__(self)
self.name = name
def run(self):
print self.name,'\n'
class ProcessRunner:
""" This class represents a single instance of a running process """
def runp(self, pid, numThreads):
mythreads = []
for tid in range(numThreads):
name = "Proc-"+str(pid)+"-Thread-"+str(tid)
th = ThreadRunner(name)
mythreads.append(th)
for i in mythreads:
i.start()
for i in mythreads:
i.join()
class ParallelExtractor:
def runInParallel(self, numProcesses, numThreads):
myprocs = []
prunner = ProcessRunner()
for pid in range(numProcesses):
pr = Process(target=prunner.runp, args=(pid, numThreads))
myprocs.append(pr)
# if __name__ == 'parallelTestModule': #This didnt work
# if __name__ == '__main__': #This obviously doesnt work
# multiprocessing.freeze_support() #added after seeing error to no avail
for i in myprocs:
i.start()
for i in myprocs:
i.join()
On Windows the subprocesses will import (i.e. execute) the main module at start. You need to insert an if __name__ == '__main__': guard in the main module to avoid creating subprocesses recursively.
Modified testMain.py:
import parallelTestModule
if __name__ == '__main__':
extractor = parallelTestModule.ParallelExtractor()
extractor.runInParallel(numProcesses=2, numThreads=4)
Try putting your code inside a main function in testMain.py
import parallelTestModule
if __name__ == '__main__':
extractor = parallelTestModule.ParallelExtractor()
extractor.runInParallel(numProcesses=2, numThreads=4)
See the docs:
"For an explanation of why (on Windows) the if __name__ == '__main__'
part is necessary, see Programming guidelines."
which say
"Make sure that the main module can be safely imported by a new Python
interpreter without causing unintended side effects (such a starting a
new process)."
... by using if __name__ == '__main__'
Though the earlier answers are correct, there's a small complication it would help to remark on.
In case your main module imports another module in which global variables or class member variables are defined and initialized to (or using) some new objects, you may have to condition that import in the same way:
if __name__ == '__main__':
import my_module
As #Ofer said, when you are using another libraries or modules, you should import all of them inside the if __name__ == '__main__':
So, in my case, ended like this:
if __name__ == '__main__':
import librosa
import os
import pandas as pd
run_my_program()
hello here is my structure for multi process
from multiprocessing import Process
import time
start = time.perf_counter()
def do_something(time_for_sleep):
print(f'Sleeping {time_for_sleep} second...')
time.sleep(time_for_sleep)
print('Done Sleeping...')
p1 = Process(target=do_something, args=[1])
p2 = Process(target=do_something, args=[2])
if __name__ == '__main__':
p1.start()
p2.start()
p1.join()
p2.join()
finish = time.perf_counter()
print(f'Finished in {round(finish-start,2 )} second(s)')
you don't have to put imports in the if __name__ == '__main__':, just running the program you wish to running inside
In yolo v5 with python 3.8.5
if __name__ == '__main__':
from yolov5 import train
train.run()
In my case it was a simple bug in the code, using a variable before it was created. Worth checking that out before trying the above solutions. Why I got this particular error message, Lord knows.
The below solution should work for both python multiprocessing and pytorch multiprocessing.
As other answers mentioned that the fix is to have if __name__ == '__main__': but I faced several issues in identifying where to start because I am using several scripts and modules. When I can call my first function inside main then everything before it started to create multiple processes (not sure why).
Putting it at the very first line (even before the import) worked. Only calling the first function return timeout error. The below is the first file of my code and multiprocessing is used after calling several functions but putting main in the first seems to be the only fix here.
if __name__ == '__main__':
from mjrl.utils.gym_env import GymEnv
from mjrl.policies.gaussian_mlp import MLP
from mjrl.baselines.quadratic_baseline import QuadraticBaseline
from mjrl.baselines.mlp_baseline import MLPBaseline
from mjrl.algos.npg_cg import NPG
from mjrl.algos.dapg import DAPG
from mjrl.algos.behavior_cloning import BC
from mjrl.utils.train_agent import train_agent
from mjrl.samplers.core import sample_paths
import os
import json
import mjrl.envs
import mj_envs
import time as timer
import pickle
import argparse
import numpy as np
# ===============================================================================
# Get command line arguments
# ===============================================================================
parser = argparse.ArgumentParser(description='Policy gradient algorithms with demonstration data.')
parser.add_argument('--output', type=str, required=True, help='location to store results')
parser.add_argument('--config', type=str, required=True, help='path to config file with exp params')
args = parser.parse_args()
JOB_DIR = args.output
if not os.path.exists(JOB_DIR):
os.mkdir(JOB_DIR)
with open(args.config, 'r') as f:
job_data = eval(f.read())
assert 'algorithm' in job_data.keys()
assert any([job_data['algorithm'] == a for a in ['NPG', 'BCRL', 'DAPG']])
job_data['lam_0'] = 0.0 if 'lam_0' not in job_data.keys() else job_data['lam_0']
job_data['lam_1'] = 0.0 if 'lam_1' not in job_data.keys() else job_data['lam_1']
EXP_FILE = JOB_DIR + '/job_config.json'
with open(EXP_FILE, 'w') as f:
json.dump(job_data, f, indent=4)
# ===============================================================================
# Train Loop
# ===============================================================================
e = GymEnv(job_data['env'])
policy = MLP(e.spec, hidden_sizes=job_data['policy_size'], seed=job_data['seed'])
baseline = MLPBaseline(e.spec, reg_coef=1e-3, batch_size=job_data['vf_batch_size'],
epochs=job_data['vf_epochs'], learn_rate=job_data['vf_learn_rate'])
# Get demonstration data if necessary and behavior clone
if job_data['algorithm'] != 'NPG':
print("========================================")
print("Collecting expert demonstrations")
print("========================================")
demo_paths = pickle.load(open(job_data['demo_file'], 'rb'))
########################################################################################
demo_paths = demo_paths[0:3]
print (job_data['demo_file'], len(demo_paths))
for d in range(len(demo_paths)):
feats = demo_paths[d]['features']
feats = np.vstack(feats)
demo_paths[d]['observations'] = feats
########################################################################################
bc_agent = BC(demo_paths, policy=policy, epochs=job_data['bc_epochs'], batch_size=job_data['bc_batch_size'],
lr=job_data['bc_learn_rate'], loss_type='MSE', set_transforms=False)
in_shift, in_scale, out_shift, out_scale = bc_agent.compute_transformations()
bc_agent.set_transformations(in_shift, in_scale, out_shift, out_scale)
bc_agent.set_variance_with_data(out_scale)
ts = timer.time()
print("========================================")
print("Running BC with expert demonstrations")
print("========================================")
bc_agent.train()
print("========================================")
print("BC training complete !!!")
print("time taken = %f" % (timer.time() - ts))
print("========================================")
# if job_data['eval_rollouts'] >= 1:
# score = e.evaluate_policy(policy, num_episodes=job_data['eval_rollouts'], mean_action=True)
# print("Score with behavior cloning = %f" % score[0][0])
if job_data['algorithm'] != 'DAPG':
# We throw away the demo data when training from scratch or fine-tuning with RL without explicit augmentation
demo_paths = None
# ===============================================================================
# RL Loop
# ===============================================================================
rl_agent = DAPG(e, policy, baseline, demo_paths,
normalized_step_size=job_data['rl_step_size'],
lam_0=job_data['lam_0'], lam_1=job_data['lam_1'],
seed=job_data['seed'], save_logs=True
)
print("========================================")
print("Starting reinforcement learning phase")
print("========================================")
ts = timer.time()
train_agent(job_name=JOB_DIR,
agent=rl_agent,
seed=job_data['seed'],
niter=job_data['rl_num_iter'],
gamma=job_data['rl_gamma'],
gae_lambda=job_data['rl_gae'],
num_cpu=job_data['num_cpu'],
sample_mode='trajectories',
num_traj=job_data['rl_num_traj'],
num_samples= job_data['rl_num_samples'],
save_freq=job_data['save_freq'],
evaluation_rollouts=job_data['eval_rollouts'])
print("time taken = %f" % (timer.time()-ts))
I ran into the same problem. #ofter method is correct because there are some details to pay attention to. The following is the successful debugging code I modified for your reference:
if __name__ == '__main__':
import matplotlib.pyplot as plt
import numpy as np
def imgshow(img):
img = img / 2 + 0.5
np_img = img.numpy()
plt.imshow(np.transpose(np_img, (1, 2, 0)))
plt.show()
dataiter = iter(train_loader)
images, labels = dataiter.next()
imgshow(torchvision.utils.make_grid(images))
print(' '.join('%5s' % classes[labels[i]] for i in range(4)))
For the record, I don't have a subroutine, I just have a main program, but I have the same problem as you. This demonstrates that when importing a Python library file in the middle of a program segment, we should add:
if __name__ == '__main__':
I tried the tricks mentioned above on the following very simple code. but I still cannot stop it from resetting on any of my Window machines with Python 3.8/3.10. I would very much appreciate it if you could tell me where I am wrong.
print('script reset')
def do_something(inp):
print('Done!')
if __name__ == '__main__':
from multiprocessing import Process, get_start_method
print('main reset')
print(get_start_method())
Process(target=do_something, args=[1]).start()
print('Finished')
output displays:
script reset
main reset
spawn
Finished
script reset
Done!
Update:
As far as I understand, you guys are not preventing either the script containing the __main__ or the .start() from resetting (which doesn't happen in Linux), rather you are suggesting workarounds so that we don't see the reset. One has to make all imports minimal and put them in each function separately, but it is still, relative to Linux, slow.

Python code using multiprocessing running infinitely

I am trying to execute the following code in jupyter notebook using multiprocessing but the loop is running infinitely.
I need help resolving this issue.
import multiprocessing as mp
import numpy as np
def square(x):
return np.square(x)
x = np.arange(64)
pool = mp.Pool(4)
squared = pool.map(square, [x[16*i:16*i+16] for i in range(4)])
The output for mp.cpu_count() was 4.
You need to rewrite your code to be something like:
def main():
x = np.arange(64)
pool = mp.Pool(4)
squared = .....
if __name__ == '__main__':
main()
This code is currently being run in every process. You need it to only run in the one process that is doing the setup.
You forgot:
pool.close()
pool.join()

Python multiprocessing pool does not work when importing custom classes in the script

I have a simple Python script which runs a parallel pool:
import multiprocessing as mp
def square(x):
return x**2
if __name__ == '__main__':
pool = mp.Pool(4)
results=pool.map(square,range(1,20))
It works fine and as expected. However, if I import any simple custom class, such as the code below, it doesn't work any more. I start the script execution, but the script does not terminate. This is weird, as I do not use the imported class.
import multiprocessing as mp
from Person import Person
def square(x):
return x**2
if __name__ == '__main__':
pool = mp.Pool(4)
results=pool.map(square,range(1,20))
The class Person is very simple:
class Person:
def __init__(self, id):
self.id = id
What is the reason for this behavior and how can I fix it?
EDIT: I am using Windows 10

Logging nested functions using joblib Parallel and delayed calls

In one of my scripts I have something like:
import logging
from joblib import Parallel, delayed
def f_A(x):
logging.info("f_A "+str(x))
def f_B():
logging.info("f_B")
res = Parallel(n_jobs=2, prefer="processes")(delayed(f_A)(x) for x in range(10))
if __name__ == "__main__":
logging.basicConfig(level=logging.INFO)
f_B()
I would expect that when I run python script.py something like:
INFO:root:f_B
INFO:root:f_A
to be shown in the console, instead I see:
INFO:root:f_B
but no information from f_A is shown.
How can I get f_A --and eventually functions called from there-- to show in the logs?
I think the issue is due to default logging level that is DEBUG and the main process doesn't share propagate the level to the children. If you modify slightly the script to:
import logging
from joblib import Parallel, delayed
def f_A(x):
logging.basicConfig(level=logging.INFO)
logging.info("f_A "+str(x))
def f_B():
logging.info("f_B")
res = Parallel(n_jobs=2, prefer="processes")(delayed(f_A)(x) for x in range(10))
if __name__ == "__main__":
logging.basicConfig(level=logging.INFO)
f_B()
then everything works as intended.

Update variable from imported module with Python when using Threading

In a project, I would like to separate the visualization and calculation in two different modules. The goal is to transfer the variables of the calculation-module to a main-script, in order to visualize it with the visualization-script.
Following this post
Using global variables between files?,
I am able to use a config-script in order to transfer a variable between to scripts now. But unfortunately, this is not working when using threading. The Output of the main.py is always "get: 1".
Does anyone have an idea?
main.py:
from threading import Thread
from time import sleep
import viz
import change
add_Thread = Thread(target=change.add)
add_Thread.start()
viz.py:
import config
from time import sleep
while True:
config.init()
print("get:", config.x)
sleep(1)
config.py:
x = 1
def init():
global x
change.py:
import config
def add():
while True:
config.x += 1
config.init()
OK, fount the answer by myself. Problem was in the "main.py". One has to put the "import viz" after starting the thread:
from threading import Thread
from time import sleep
import change
add_Thread = Thread(target=change.add)
add_Thread.start()
import viz

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