Filling a dataframe from a dictionary keys and values: efficient way - python

I have the following dataframe as an example.
df_test = pd.DataFrame(data=0, index=["green","yellow","red"], columns=["bear","dog","cat"])
I have the following dictionary with keys and values that are the same or related to the index and columns od my dataframe.
d = {"green":["bear","dog"], "yellow":["bear"], "red":["bear"]}
I filled my dataframe according with the keys and values that are presented, using:
for k, v in d.items():
for x in v:
df_test.loc[k, x] = 1
My problem here is that the dataframe and the dictionary I'm working with are very large and it took too much time to compute. Is there a more efficient way to do it? Maybe iterating over rows in the dataframe instead of keys and values in the dictionary?

Because performance is important use MultiLabelBinarizer:
d = {"green":["bear","dog"], "yellow":["bear"], "red":["bear"]}
from sklearn.preprocessing import MultiLabelBinarizer
mlb = MultiLabelBinarizer()
df = pd.DataFrame(mlb.fit_transform(list(d.values())),
columns=mlb.classes_,
index=list(d.keys()))
print (df)
bear dog
green 1 1
yellow 1 0
red 1 0
And then add missing columns and index labels by DataFrame.reindex:
df_test = df.reindex(columns=df_test.columns, index=df_test.index, fill_value=0)
print (df_test)
bear dog cat
green 1 1 0
yellow 1 0 0
red 1 0 0

use get_dummies()
# convert dict to a Series
s = pd.Series(d)
# explode your list into columns and get dummies
df = pd.get_dummies(s.apply(pd.Series), prefix='', prefix_sep='')
bear dog
green 1 1
yellow 1 0
red 1 0
update
# convert dict to a Series
s = pd.Series(d)
# create a new data frame
df = pd.DataFrame(s.values.tolist(), index=s.index)
# get_dummies
new_df = pd.get_dummies(df, prefix='', prefix_sep='')

Related

Pandas groupby and get nunique of multiple columns in a dataframe

I have a dataframe like as below
stu_id,Mat_grade,sci_grade,eng_grade
1,A,C,A
1,A,C,A
1,B,C,A
1,C,C,A
2,D,B,B
2,D,C,B
2,D,D,C
2,D,A,C
tf = pd.read_clipboard(sep=',')
My objective is to
a) Find out how many different unique grades that a student got under Mat_grade, sci_grade and eng_grade
So, I tried the below
tf['mat_cnt'] = tf.groupby(['stu_id'])['Mat_grade'].nunique()
tf['sci_cnt'] = tf.groupby(['stu_id'])['sci_grade'].nunique()
tf['eng_cnt'] = tf.groupby(['stu_id'])['eng_grade'].nunique()
But this doesn't provide the expected output. Since, I have more than 100K unique ids, any efficient and elegant solution is really helpful
I expect my output to be like as below
You can specify columns names in list and for column cols call DataFrameGroupBy.nunique with rename:
cols = ['Mat_grade','sci_grade', 'eng_grade']
new = ['mat_cnt','sci_cnt','eng_cnt']
d = dict(zip(cols, new))
df = tf.groupby(['stu_id'], as_index=False)[cols].nunique().rename(columns=d)
print (df)
stu_id mat_cnt sci_cnt eng_cnt
0 1 3 1 1
1 2 1 4 2
Another idea is used named aggregation:
cols = ['Mat_grade','sci_grade', 'eng_grade']
new = ['mat_cnt','sci_cnt','eng_cnt']
d = {v: (k,'nunique') for k, v in zip(cols, new)}
print (d)
{'mat_cnt': ('Mat_grade', 'nunique'),
'sci_cnt': ('sci_grade', 'nunique'),
'eng_cnt': ('eng_grade', 'nunique')}
df = tf.groupby(['stu_id'], as_index=False).agg(**d)
print (df)
stu_id mat_cnt sci_cnt eng_cnt
0 1 3 1 1
1 2 1 4 2

How to filter dataframe by multiple dictionary sets

How to efficiently filter df by multiple dictionary sets. The example will be as following:
df = pd.DataFrame({'A':[10,20,20,10,20], 'B':[0,1,0,1,1], 'C':['up','down','up','down','down'],'D':[100,200,200,100,100]})
filter_sets = [{'A':10, 'B':0, 'C':'up'}, {'A':20, 'B':1, 'C':'down'}]
I only know that I can filter df by single dictionary by:
df.loc[(df[list(filter_set)] == pd.Series(filter_set)).all(axis=1)]
But is it possible to filter several dict masks at once?
** The format of filter_sets is not necessary to be something like above. If it can provide filter for multiple columns, then it is fine.
Use np.logical_or.reduce with list comprehension:
mask = np.logical_or.reduce([(df[list(x)]==pd.Series(x)).all(axis=1) for x in filter_sets])
#alternative solution
mask = (pd.concat([(df[list(x)]==pd.Series(x)).all(axis=1) for x in filter_sets], axis=1)
.any(axis=1))
df2 = df[mask]
print (df2)
A B C D
0 10 0 up 100
1 20 1 down 200
4 20 1 down 100
Or if all keys are same is possible create helper DataFrame with merge:
df2 = pd.DataFrame(filter_sets).merge(df)
print (df2)
A B C D
0 10 0 up 100
1 20 1 down 200
2 20 1 down 100

Pandas Dataframe convert column of lists to multiple columns

I am trying to convert a dataframe that has list of various size for example something like this:
d={'A':[1,2,3],'B':[[1,2,3],[3,5],[4]]}
df = pd.DataFrame(data=d)
df
to something like this:
d1={'A':[1,2,3],'B-1':[1,0,0],'B-2':[1,0,0],'B-3':[1,1,0],'B-4':[0,0,1],'B-5':[0,1,0]}
df1 = pd.DataFrame(data=d1)
df1
Thank you for the help
explode the lists then get_dummies and sum over the original index. (max [credit to #JonClements] if you want true dummies and not counts in case there can be multiples). Then join the result back
dfB = pd.get_dummies(df['B'].explode()).sum(level=0).add_prefix('B-')
#dfB = pd.get_dummies(df['B'].explode()).max(level=0).add_prefix('B-')
df = pd.concat([df['A'], dfB], axis=1)
# A B-1 B-2 B-3 B-4 B-5
#0 1 1 1 1 0 0
#1 2 0 0 1 0 1
#2 3 0 0 0 1 0
You can use pop to remove the column you explode so you don't need to specify df[list_of_all_columns_except_B] in the concat:
df = pd.concat([df, pd.get_dummies(df.pop('B').explode()).sum(level=0).add_prefix('B-')],
axis=1)

Changing multiple column names

Let's say I have a data frame with such column names:
['a','b','c','d','e','f','g']
And I would like to change names from 'c' to 'f' (actually add string to the name of column), so the whole data frame column names would look like this:
['a','b','var_c_equal','var_d_equal','var_e_equal','var_f_equal','g']
Well, firstly I made a function that changes column names with the string i want:
df.rename(columns=lambda x: 'or_'+x+'_no', inplace=True)
But now I really want to understand how to implement something like this:
df.loc[:,'c':'f'].rename(columns=lambda x: 'var_'+x+'_equal', inplace=True)
You can a use a list comprehension for that like:
Code:
new_columns = ['var_{}_equal'.format(c) if c in 'cdef' else c for c in columns]
Test Code:
import pandas as pd
df = pd.DataFrame({'a':(1,2), 'b':(1,2), 'c':(1,2), 'd':(1,2)})
print(df)
df.columns = ['var_{}_equal'.format(c) if c in 'cdef' else c
for c in df.columns]
print(df)
Results:
a b c d
0 1 1 1 1
1 2 2 2 2
a b var_c_equal var_d_equal
0 1 1 1 1
1 2 2 2 2
One way is to use a dictionary instead of an anonymous function. Both the below variations assume the columns you need to rename are contiguous.
Contiguous columns by position
d = {k: 'var_'+k+'_equal' for k in df.columns[2:6]}
df = df.rename(columns=d)
Contiguous columns by name
If you need to calculate the numerical indices:
cols = df.columns.get_loc
d = {k: 'var_'+k+'_equal' for k in df.columns[cols('c'):cols('f')+1]}
df = df.rename(columns=d)
Specifically identified columns
If you want to provide the columns explicitly:
d = {k: 'var_'+k+'_equal' for k in 'cdef'}
df = df.rename(columns=d)

pandas convert grouped rows into columns

I have a dataframe such as:
label column1
a 1
a 2
b 6
b 4
I would like to make a dataframe with a new column, with the opposite value from column1 where the labels match. Such as:
label column1 column2
a 1 2
a 2 1
b 6 4
b 4 6
I know this is probably very simple to do with a groupby command but I've been searching and can't find anything.
The following uses groupby and apply and seems to work okay:
x = pd.DataFrame({ 'label': ['a','a','b','b'],
'column1': [1,2,6,4] })
y = x.groupby('label').apply(
lambda g: g.assign(column2 = np.asarray(g.column1[::-1])))
y = y.reset_index(drop=True) # optional: drop weird index
print(y)
you can try the code block below:
#create the Dataframe
df = pd.DataFrame({'label':['a','a','b','b'],
'column1':[1,2,6,4]})
#Group by label
a = df.groupby('label').first().reset_index()
b = df.groupby('label').last().reset_index()
#Concat those groups to create columns2
df2 = (pd.concat([b,a])
.sort_values(by='label')
.rename(columns={'column1':'column2'})
.reset_index()
.drop('index',axis=1))
#Merge with the original Dataframe
df = df.merge(df2,left_index=True,right_index=True,on='label')[['label','column1','column2']]
Hope this helps
Assuming their are only pairs of labels, you could use the following as well:
# Create dataframe
df = pd.DataFrame(data = {'label' :['a', 'a', 'b', 'b'],
'column1' :[1,2, 6,4]})
# iterate over dataframe, identify matching label and opposite value
for index, row in df.iterrows():
newvalue = int(df[(df.label == row.label) & (df.column1 != row.column1)].column1.values[0])
# set value to new column
df.set_value(index, 'column2', newvalue)
df.head()
You can use groupby with apply where create new Series with back order:
df['column2'] = df.groupby('label')["column1"] \
.apply(lambda x: pd.Series(x[::-1].values)).reset_index(drop=True)
print (df)
column1 label column2
0 1 a 2
1 2 a 1
2 6 b 4
3 4 b 6

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