sqlalchemy.exc.OperationalError: (psycopg2.OperationalError) FATAL: database does not exist - python

I am trying to populate a database with two tables in SQLAlchemy. I have already created the database test_database and now I am trying to create 2 tables inside this. I have already checked that this database is successfully created using \l. Following is the code for the file create.py which creates a database with two tables:
import os
from flask import Flask, render_template, request
from models import *
from flask_sqlalchemy import SQLAlchemy
app = Flask(__name__)
app.config["SQLALCHEMY_DATABASE_URI"] = 'postgresql://shammun:my_password#localhost:5432/test_database.db'
app.config["SQLALCHEMY_TRACK_MODIFICATIONS"] = False
# db = SQLAlchemy()
db.init_app(app)
def main():
db.create_all()
if __name__ == "__main__":
with app.app_context():
main()
This file create.py imports model.py which generates two tables, the code of which is given below:
from flask_sqlalchemy import SQLAlchemy
db = SQLAlchemy()
class Flight(db.Model):
__tablename__ = "flights"
id = db.Column(db.Integer, primary_key=True)
origin = db.Column(db.String, nullable=False)
destination = db.Column(db.String, nullable=False)
duration = db.Column(db.Integer, nullable=False)
class Passenger(db.Model):
__tablename__ = "passengers"
id = db.Column(db.Integer, primary_key=True)
name = db.Column(db.String, nullable=False)
flight_id = db.Column(db.Integer, db.ForeignKey("flights.id"), nullable=False)
Now, in the terminal when I run the file create.py, I get the following error:
sqlalchemy.exc.OperationalError: (psycopg2.OperationalError) FATAL: database "test_database.db" does not exist
Actually, this is almost the same question that I asked in this post db.create_all() doesn't create a database a month ago. The only difference is that I asked the wrong question that database was not created. Actually the question would be why the database wasn't found and why would it throw an error. As this question was closed and as I have tried so many times for a long time to resolve it and couldn't find any solution, I am asking almost the same question again. I will much appreciate if someone can help me to lift me from this bottleneck where I am stuck for a long time.

Check on what port is your postgres running using this command \conninfo
cause I doubt your PostgreSQL database is running on some different port.
Default port of PostgreSQL is 5432, but if it is already occupied by some other application then it tries next empty port and starts running on 5433
So in your app config variable of SQLALCHEMY_DATABASE_URI, try changing 5432 to 5433 and see if it works.
Edit 1:
Try removing .db from your database name test_database.db, and just put test_database
Change this:
app.config["SQLALCHEMY_DATABASE_URI"] = 'postgresql://shammun:my_password#localhost:5432/test_database.db'
To this:
app.config["SQLALCHEMY_DATABASE_URI"] = 'postgresql://shammun:my_password#localhost:5432/test_database'

Related

How to set schema_translate_map in SQLAlchemy object in Flask app

My app.py file
from flask import Flask
from flask_sqlalchemy import SQLAlchemy
from flask import Flask
from flask_sqlalchemy import SQLAlchemy
app = Flask(__name__)
app.config['SQLALCHEMY_DATABASE_URI'] = 'postgres:////tmp/test.db'
db = SQLAlchemy(app) # refer https://flask-sqlalchemy.palletsprojects.com/en/2.x/api/#flask_sqlalchemy.SQLAlchemy
One of my model classes, where I imported db
from app import db
Base = declarative_base()
# User class
class User(db.Model, Base):
id = db.Column(db.Integer, primary_key=True)
username = db.Column(db.String(80), unique=True, nullable=False)
email = db.Column(db.String(120), unique=True, nullable=False)
def __repr__(self):
return '<User %r>' % self.username
def get_user_by_id(self, id):
return self.query.get(id)
My database has the same set of tables in different schema (multi-tenancy) and there
I need to select the schema as per the request initiated by a particular tenant on the fly by using before_request (grabbing tenant_id from subdomain URL).
I found Postgres provides selecting the schema name on fly by using
schema_translate_map ref. https://docs.sqlalchemy.org/en/14/core/connections.html#translation-of-schema-names and that is under execution_options https://docs.sqlalchemy.org/en/14/core/connections.html#sqlalchemy.engine.Connection.execution_options
In my above code snippet where you see db = SQLAlchemy(app), as per official documentation, two parameters can be set in SQLAlchemy objct creation and they are - session_options and engine_options, but no execution_options ref. https://flask-sqlalchemy.palletsprojects.com/en/2.x/api/#flask_sqlalchemy.SQLAlchemy
But how do I set schema_translate_map setting when I am creating an object of SQLAlchemy
I tried this -
db = SQLAlchemy(app,
session_options={
"autocommit": True,
"autoflush": False,
"schema_translate_map": {
None: "public"
}
}
)
But obviously, it did not work, because schema_translate_map is under execution_options as mentioned here https://docs.sqlalchemy.org/en/14/core/connections.html#translation-of-schema-names
Anyone has an idea, how to set schema_translate_map at the time of creating SQLAlchemy object.
My goal is to set it dynamically for each request. I want to control it from this
centralized place, rather than going in each model file and specifying it when I execute
queries.
I am aware of doing this differently as suggested here https://stackoverflow.com/a/56490246/1560470
but my need is to set somewhere around db = SQLAlchemy(app) in app.py file only. Then after I import db in all my model classes (as shown above) and in those model classes, all queries execute under the selected schema.
I found a way to accomplish it. This is what needed
db = SQLAlchemy(app,
session_options={
"autocommit": True,
"autoflush": False
},
engine_options={
"execution_options":
{
"schema_translate_map": {
None: "public",
"abc": "xyz"
}
}
}
)

Creating a mysql database using sqlalchemy

I'm trying to create a mysql database using sqlalchemy.
I have a flask web app which contains an sqlite database. I'm trying to switch over to mysql. I'm fairly new to sqlalchemy and have learned how to create databases via sqlalchemy. However the databases were sqlite databases. I'm trying to use sqlalchemy to create a mysql database and after reading multiple posts i still can't seem to get it.
I've also installed python-mysqldb
Snippets of the original code used to create an sqlite database which was successful.
Base = declarative_base()
class Categories(Base):
__tablename__ = 'categories'
id = Column(Integer, primary_key=True)
name = Column(String, unique=True)
image = Column(String)
link = Column(String)
description = Column(String)
if __name__ =='__main__':
engine = create_engine('sqlite:///app/database/main.db', echo=True)
Base.metadata.create_all(engine)
mysql attempt
if __name__ =='__main__':
engine = create_engine('mysql://user:password#localhost/app/database/main.db', echo=True)
Base.metadata.create_all(engine)
mysql 2nd attempt
if __name__ =='__main__':
engine = create_engine('mysql://user:password#localhost/app/database/main.db', echo=True)
engine.execute("CREATE DATABASE main.db")
engine.execute("USE main.db")
The error i keep receiving.
sqlalchemy.exc.OperationalError: (_mysql_exceptions.OperationalError) (1049, "Unknown database 'app/database/main.db'") (Background on this error at: http://sqlalche.me/e/e3q8)
My best guess is that there's clearly something i'm missing about using mysql with sqlalchemy.
Any help to even point me in the right direction would be greatly appreciated.
a) The correct DBURI syntax for mysql is:
mysql://username:password#servername/databasename
b) The database databasename must be created first. So before you run the Python .create_all() you should connect to the db server using the command line mysql client and execute the CREATE DATABASE databasename statement to create an empty database:
$ mysql -u username -p
... type password
> CREATE DATABASE databasename;
c) You should now be able to run the Python code to create the tables in the empty database.

spatialite backend for geoalchemy2 in Python

I'm trying to SQLITE/spatialite with geoalchemy2. It seems to be possible according that link.
My problem comes I think from the custom engine.
What I have so far:
from flask_sqlalchemy import SQLAlchemy
from geoalchemy2 import Geometry
#and other imports...
app = Flask(__name__)
app.config['SQLALCHEMY_DATABASE_URI'] = 'sqlite:////Users/cricket/Documents/peas project/open-peas/localapp/test.db'
app.config['SQLALCHEMY_TRACK_MODIFICATIONS'] = False
app.config['SQLALCHEMY_ECHO'] = True
db = SQLAlchemy(app)
class Polygon(db.Model):
id = db.Column(db.Integer, primary_key=True)
name = db.Column(db.String(64), unique=True)
point = db.Column(Geometry("POLYGON"))
#app.before_first_request
def init_request():
db.create_all()
When I start the script, I get the message below:
cursor.execute(statement, parameters)
sqlalchemy.exc.OperationalError: (sqlite3.OperationalError) near "POLYGON": syntax error [SQL: '\nCREATE TABLE polygon (\n\tid INTEGER NOT NULL, \n\tname VARCHAR(64), \n\tpoint geometry(POLYGON,-1), \n\tPRIMARY KEY (id), \n\tUNIQUE (name)\n)\n\n'] (Background on this error at: http://sqlalche.me/e/e3q8)
Any idea how I could fix that ?
I had the same problem and it took a while to work it out. There are a bunch of layers (SQLAlchemy, Flask, SQLite, spatialite, Flask's SQLAlchemy extension, ....) working together. Hope this helps:
from sqlalchemy import event
db = SQLAlchemy(app)
#event.listens_for(db.engine, "connect")
def load_spatialite(dbapi_conn, connection_record):
# From https://geoalchemy-2.readthedocs.io/en/latest/spatialite_tutorial.html
dbapi_conn.enable_load_extension(True)
dbapi_conn.load_extension('/usr/lib/x86_64-linux-gnu/mod_spatialite.so')
Struggling with the same question, even with the accepted answer, I eventually realized that the management argument of the Geometry() constructor was missing, as explained here.
Following content should send the right sql command to DB API :
class Polygon(db.Model):
id = db.Column(db.Integer, primary_key=True)
name = db.Column(db.String(64), unique=True)
point = db.Column(Geometry("POLYGON", management = True))

How do I create a table in PostgreSQL with SQLAlchemy?

I tried to create a table in the "app" database, but got this error:
app=# CREATE TABLE users;
ERROR: syntax error at or near ";"
LINE 1: LINE 1: CREATE TABLE users;
^
The columns are defined in models.py which is why I don't create them here.
Do not create the tables in PostgreSQL, SQLAlchemy will create the table (and the columns) for you. All you need to do is create the database, which you have done. To create the tables with Flask-SQLAlchemy:
from flask import Flask
from flask_sqlalchemy import SQLAlchemy
app = Flask(__name__)
db = SQLAlchemy(app)
class User(db.Model):
id = db.Column(db.Integer, primary_key=True)
name = db.Column(db.String, nullable=False, unique=True)
with app.app_context():
db.create_all()
To address the error (although as stated above you should not do this), it is because that is not a full CREATE TABLE expression. You need to specify zero or more columns for the table.
CREATE TABLE my_table ();
In my case forgot to import my Model class and code
run without any error:).
If you call create_all() on interactive mode please ensure that you import particular Model class.
Note: Every time you make a change on Model class restart ipython.

Configuring Flask-SQLAlchemy to use multiple databases with Flask-Restless

I have a Flask app that uses Flask-SQLAlchemy and I'm trying to configure it to use multiple databases with the Flask-Restless package.
According to the docs, configuring your models to use multiple databases with __bind_key__ seems pretty straightforward.
However it doesn't seem to be working for me.
I create my app and initialise my database like this:
from flask import Flask
from flask.ext.sqlalchemy import SQLAlchemy
SQLALCHEMY_DATABASE_URI = 'postgres://db_user:db_pw#localhost:5432/db_name'
SQLALCHEMY_BINDS = {
'db1': SQLALCHEMY_DATABASE_URI,
'db2': 'mysql://db_user:db_pw#localhost:3306/db_name'
}
app = Flask(__name__)
db = SQLALchemy(app)
Then define my models including __bind_key__, which should tell SQLAlchemy which DB it needs to use:
class PostgresModel(db.Model):
__tablename__ = 'postgres_model_table'
__bind_key__ = 'db1'
id = db.Column(db.Integer, primary_key=True)
...
class MySQLModel(db.Model):
__tablename__ = 'mysql_model_table'
__bind_key__ = 'db2'
id = db.Column(db.Integer, primary_key=True)
...
Then I fire up Flask-Restless like this:
manager = restless.APIManager(app, flask_sqlalchemy_db=db)
manager.init_app(app, db)
auth_func = lambda: is_authenticated(app)
manager.create_api(PostgresModel,
methods=['GET'],
collection_name='postgres_model',
authentication_required_for=['GET'],
authentication_function=auth_func)
manager.create_api(MySQLModel,
methods=['GET'],
collection_name='mysql_model',
authentication_required_for=['GET'],
authentication_function=auth_func)
The app runs fine and when I hit http://localhost:5000/api/postgres_model/[id] I get the expected JSON response of the object from the Postgres DB (I'm guessing this is because I have it's credentials in SQLALCHEMY_DATABASE_URI).
Although when I hit http://localhost:5000/api/mysql_model/[id], I get a mysql_model_table does not exist error, indicating that it's looking in the Postgres DB, not the MySQL one.
What am I doing wrong here?
This was not working because of a simple typo:
__bind_key = 'db1'
Should have been
__bind_key__ = 'db1'
I've updated the original question and fixed the typo as an example of how this can work for others.

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