How to avoid memory error when using recursion? (Fibonacci Numbers) - python

I have the following exercise:
'''FIBONACCI
Compute the n'th Fibonacci number fib(n), defined recursively:
fib(0) == 0, fib(1) == 1, fib(n) = fib(n - 1) + fib(n - 2)
Input:
A single line containing an integer n, 0 <= n <= 10.000
Output:
A single line with the integer fib(n).
Example:
Input: 10
Output: 55
'''
My raw attempt so to speak:
def fib(n):
if n <= 1:
return n
if n >= 2:
return fib(n-1) + fib(n-2)
n = int(input()) # Read integer n from standard input
print(fib(n))
However this code can only handle up to around n = 500 before reaching maximum recursion depth. To increase that number and create code that can handle up to 10 000, I have tried two things: 1) To increase maximum recursion depth and 2) To use memoization in the form of a decorator. Now the code can handle up to about n = 2000:
import sys
from functools import lru_cache
sys.setrecursionlimit(10000)
#lru_cache(maxsize=None)
def fib(n):
if n <= 1:
return n
if n >= 2:
return fib(n-1) + fib(n-2)
n = int(input()) # Read integer n from standard input
print(fib(n))
With n > 2000 I get an memory error (stack overflow). How do I fix this? What more can I do? Is it even possible with my recursive function or do I have to change it in some way to make it work? Any help is appreciated!

A simple implementation of the nth Fibonacci number. There is no need to use recursion.
def fib(n):
if n == 0:
return 0
elif n == 1:
return 1
else:
fa, fb = 0, 1
for i in range(2, n + 1):
fa, fb = fb, fa + fb
return fb
(Note: this is not the fastest. It is O(n). An O(log n) solution is available -- e.g. here, see their method 5.)

With a recursive implementation, you will almost end up with trouble when trying to go to such great depths. Like #alaniwi stated, you can always implement it in a non-recursive method. Here's a O(n) time solution with a O(1) space complexity. (Note: Theoretically you can even get a O(log n) solution.)
from collections import deque
def fib(n):
past = deque([1], maxlen=2)
for _ in range(n): past.appendleft(sum(past))
return past[0]
Because the fibonacci function only requires the last two values of f, we can store only those and bubble upwards.

In the task they give a recursive definition of the fibonacci sequence but nothing is said about a recursive implementation.
This is an iterative implementation of the recursive definition:
def fib(n):
if n == 0:
return 0
f1, f2 = 0, 1
for i in range(1, n + 1):
f1, f2 = f2, f1 + f2
return f2

Related

why maximum recursion limit error is caused when code(1) is executed and no error when code(2) is executed

So here is the 2 python codes of Fibonacci series using recursive function. I wanted to know the difference between these code and why code(1) is not working, and code(2) works without any error?
This is not working and shows error of maximum recursion limit:
def f(n):
return f(n-1) + f(n-2)
n=8
f(n)
whereas this works:
def f(n):
if n == 0:
return 0
if n == 1:
return 1
else:
return f(n-1) + f(n-2)
f(4)
Your first code has no way of stopping. It does not have the base cases for n == 0 or n == 1, so it will continue infinitely downwards with negative numbers.
If you add:
if n <= 1:
return 0
you're golden. (allthough it is a very inefficient implementation of fibonacci).
Why is it inefficient, well because each subtree are calculated many times over. f(8) calls f(7) and f(6), but f(7) also call f(6), so you get an exponential recursive tree. Your running time will be O(2^n). This is really bad, normally you will not be able to calculate fib for n even as low as 50.
You can do better if you include memoization:
from functools import lru_cache
#lru_cache(maxsize=None)
def fib2(n):
if n <= 1:
return n
else:
return fib2(n-1) + fib2(n-2)
This will remember if you have called f(n) before and return the answer you did last time. The issue now is that you need to remember previous called numbers, so while your running time has decreased to O(n), your space requirement is now O(n) too.
You can improve on this again, by abandoning recursive functions all together and go
def fib3(n):
if n == 0:
return 0
f1 = 0
f2 = 1
for i in range(n-1):
f1,f2 = f2, f1+f2
return f2
This is better, since you are only remembering two numbers at any time.

Dynamically changing the recursion limit for a fibonnacci program python

I am trying to write a recursive multinacci (basically fibonacci numbers except the rabbits produce k pairs instead of 1 pair with each breeding cycle) function and I want it to work with all n. Here is my code so far:
from functools import lru_cache
from sys import getrecursionlimit, setrecursionlimit
def fibnum(n, k=1):
"""Returns the nth fibonacci number of order k"""
# check if recursionlimit needs increasing
return _fibnum(n, k)
#lru_cache(maxsize=None)
def _fibnum(n, k):
if n <= 0:
return 0
if n == 1:
return 1
return _fibnum(n-1, k) + k * _fibnum(n-2, k)
A few notes about the code: the first function is a wrapper around the second so as to the description text look right. The second function is memoized, which increases performance drastically.
I've noticed that when I try to find increasing values of fibnum in order (100, 400, 1000 etc.) I can get around the recursion limit since the memoization shortcuts the recursion. I want to be able to run my function for any number right off the bat. I've tried testing the bounds of the recursion limit for n and then setting the recursion limit to that, but the only one that seemed to work was n2, but that seems too high of a limit.
Any suggestions?
Note: at a later point, I would like to add a lifespan to the formula (which is basically subtract out fibnum(n- life_span, k)). How would this affect the recursion depth needed?
One way of sidestepping the stack limitations is to set up the Fibonacci recurrence in matrix form and use the matrix version of multiplication by successive halving and squaring. With this approach the stack growth is O(log n), so you can go to gigantic values of fib(n) with no worries. Here's an implementation:
def __matrix_fib__(n):
if n == 1:
return [0, 1]
else:
f = __matrix_fib__(n / 2)
c = f[0] * f[0] + f[1] * f[1]
d = f[1] * (f[1] + 2 * f[0])
if n % 2 == 0:
return [c, d]
else:
return [d, c + d]
def fib(n):
assert (n >= 0)
if n == 0:
return n
else:
return __matrix_fib__(n)[1]
ADDENDUM
This version adds the k parameter as requested...
def __matrix_fib__(n, k):
if n == 1:
return [0, 1]
else:
f = __matrix_fib__(n / 2, k)
c = k * f[0] * f[0] + f[1] * f[1]
d = f[1] * (f[1] + 2 * k * f[0])
if n % 2 == 0:
return [c, d]
else:
return [d, k * c + d]
def fib(n, k=1):
assert (n >= 0)
if n == 0:
return n
else:
return __matrix_fib__(n, k)[1]
I won't swear this is correct because I dashed it off between classes, but my tests produced the same answers as your version when given the same inputs.
Alternatively, you could use a class as a namespace to store the cache, then calculate results iteratively:
class Fib(object):
cache = [1, 1]
#classmethod
def get(cls, n):
if n < 1:
return 0
for i in range(len(cls.cache), n):
cls.cache.append(cls.cache[-1] + cls.cache[-2])
return cls.cache[n - 1]
Usage:
a = Fib()
print a.get(1000)
If you change fibnum to limit the call stack to 100 items by computing the first 100 fibnums, then the next 100 fibnums, then the next 100 fibnums, you can avoid a recursion limit.
This produces very little wasted work since you'll need to compute the first 100 fibnums to compute the last 100 fibnums anyways.
The number 100 is arbitrary, but should be less than sys.recursionlimit.
def fibnum(n, k=1):
"""Returns the nth fibonacci number of order k"""
# build up cache of fib values early in the sequence
for intermediate_n in range(100, n, 100):
_fibnum(intermediate_n, k)
return _fibnum(n, k)

Efficient calculation of Fibonacci series

I'm working on a Project Euler problem: the one about the sum of the even Fibonacci numbers.
My code:
def Fibonacci(n):
if n == 0:
return 0
elif n == 1:
return 1
else:
return Fibonacci(n-1) + Fibonacci(n-2)
list1 = [x for x in range(39)]
list2 = [i for i in list1 if Fibonacci(i) % 2 == 0]
The problem's solution can be easily found by printing sum(list2). However, it is taking a lot of time to come up with the list2 I'm guessing. Is there any way to make this faster? Or is it okay even this way...
(the problem: By considering the terms in the Fibonacci sequence whose values do not exceed four million, find the sum of the even-valued terms.)
Yes. The primitive recursive solution takes a lot of time. The reason for this is that for each number calculated, it needs to calculate all the previous numbers more than once. Take a look at the following image.
It represents calculating Fibonacci(5) with your function. As you can see, it computes the value of Fibonacci(2) three times, and the value of Fibonacci(1) five times. That just gets worse and worse the higher the number you want to compute.
What makes it even worse is that with each fibonacci number you calculate in your list, you don't use the previous numbers you have knowledge of to speed up the computation – you compute each number "from scratch."
There are a few options to make this faster:
1. Create a list "from the bottom up"
The easiest way is to just create a list of fibonacci numbers up to the number you want. If you do that, you build "from the bottom up" or so to speak, and you can reuse previous numbers to create the next one. If you have a list of the fibonacci numbers [0, 1, 1, 2, 3], you can use the last two numbers in that list to create the next number.
This approach would look something like this:
>>> def fib_to(n):
... fibs = [0, 1]
... for i in range(2, n+1):
... fibs.append(fibs[-1] + fibs[-2])
... return fibs
...
Then you can get the first 20 fibonacci numbers by doing
>>> fib_to(20)
[0, 1, 1, 2, 3, 5, 8, 13, 21, 34, 55, 89, 144, 233, 377, 610, 987, 1597, 2584, 4181, 6765]
Or you can get the 17th fibonacci number from a list of the first 40 by doing
>>> fib_to(40)[17]
1597
2. Memoization (relatively advanced technique)
Another alternative to make it faster exists, but it is a little more complicated as well. Since your problem is that you re-compute values you have already computed, you can instead choose to save the values you have already computed in a dict, and try to get them from that before you recompute them. This is called memoization. It may look something like this:
>>> def fib(n, computed = {0: 0, 1: 1}):
... if n not in computed:
... computed[n] = fib(n-1, computed) + fib(n-2, computed)
... return computed[n]
This allows you to compute big fibonacci numbers in a breeze:
>>> fib(400)
176023680645013966468226945392411250770384383304492191886725992896575345044216019675
This is in fact such a common technique that Python 3 includes a decorator to do this for you. I present to you, automatic memoization!
import functools
#functools.lru_cache(None)
def fib(n):
if n < 2:
return n
return fib(n-1) + fib(n-2)
This does pretty much the same thing as the previous function, but with all the computed stuff handled by the lru_cache decorator.
3. Just count up (a naïve iterative solution)
A third method, as suggested by Mitch, is to just count up without saving the intermediary values in a list. You could imagine doing
>>> def fib(n):
... a, b = 0, 1
... for _ in range(n):
... a, b = b, a+b
... return a
I don't recommend these last two methods if your goal is to create a list of fibonacci numbers. fib_to(100) is going to be a lot faster than [fib(n) for n in range(101)] because with the latter, you still get the problem of computing each number in the list from scratch.
This is a very fast algorithm and it can find n-th Fibonacci number much faster than simple iterative approach presented in other answers, it is quite advanced though:
def fib(n):
v1, v2, v3 = 1, 1, 0 # initialise a matrix [[1,1],[1,0]]
for rec in bin(n)[3:]: # perform fast exponentiation of the matrix (quickly raise it to the nth power)
calc = v2*v2
v1, v2, v3 = v1*v1+calc, (v1+v3)*v2, calc+v3*v3
if rec=='1': v1, v2, v3 = v1+v2, v1, v2
return v2
You can read some more about involved math here.
Python doesn't optimize tail recursion, thus most solutions presented here will fail with Error: maximum recursion depth exceeded in comparison if n is too big (and by big, I mean 1000).
The recursion limit can be increased, but it will make Python crash on stack overflow in the operating system.
Note the difference in performance between fib_memo / fib_local and fib_lru / fib_local_exc: LRU cache is a lot slower and didn't even complete, because it produces a runtime error already for n = ~500:
import functools
from time import clock
#import sys
#sys.setrecursionlimit()
#functools.lru_cache(None)
def fib_lru(n):
if n < 2:
return n
return fib_lru(n-1) + fib_lru(n-2)
def fib_memo(n, computed = {0: 0, 1: 1}):
if n not in computed:
computed[n] = fib_memo(n-1, computed) + fib_memo(n-2, computed)
return computed[n]
def fib_local(n):
computed = {0: 0, 1: 1}
def fib_inner(n):
if n not in computed:
computed[n] = fib_inner(n-1) + fib_inner(n-2)
return computed[n]
return fib_inner(n)
def fib_local_exc(n):
computed = {0: 0, 1: 1}
def fib_inner_x(n):
try:
computed[n]
except KeyError:
computed[n] = fib_inner_x(n-1) + fib_inner_x(n-2)
return computed[n]
return fib_inner_x(n)
def fib_iter(n):
a, b = 0, 1
for i in range(n):
a, b = b, a + b
return a
def benchmark(n, *args):
print("-" * 80)
for func in args:
print(func.__name__)
start = clock()
try:
ret = func(n)
#print("Result:", ret)
except RuntimeError as e:
print("Error:", e)
print("Time:", "{:.8f}".format(clock() - start))
print()
benchmark(500, fib_iter, fib_memo, fib_local, fib_local_exc, fib_lru)
Results:
fib_iter
Time: 0.00008168
fib_memo
Time: 0.00048622
fib_local
Time: 0.00044645
fib_local_exc
Time: 0.00146036
fib_lru
Error: maximum recursion depth exceeded in comparison
Time: 0.00112552
The iterative solution is by far the fastest and does not corrupt the stack even for n=100k (0.162 seconds). It does not return the intermediate Fibonacci numbers indeed.
If you want to compute the nth even Fibonacci number, you could adapt the iterative approach like this:
def fib_even_iter(n):
a, b = 0, 1
c = 1
while c < n:
a, b = b, a + b
if a % 2 == 0:
c += 1
return a
Or if you are interested in every even number on the way, use a generator:
def fib_even_gen(n):
a, b = 0, 1
c = 1
yield a
while c < n:
a, b = b, a + b
if a % 2 == 0:
yield a
c += 1
return a
for i, f in enumerate(fib_even_gen(100), 1):
print("{:3d}. {:d}".format(i, f))
Result:
1. 0
2. 2
3. 8
4. 34
5. 144
6. 610
7. 2584
8. 10946
9. 46368
10. 196418
11. 832040
12. 3524578
13. 14930352
14. 63245986
15. 267914296
16. 1134903170
17. 4807526976
18. 20365011074
19. 86267571272
20. 365435296162
21. 1548008755920
22. 6557470319842
23. 27777890035288
24. 117669030460994
25. 498454011879264
26. 2111485077978050
27. 8944394323791464
28. 37889062373143906
29. 160500643816367088
30. 679891637638612258
31. 2880067194370816120
32. 12200160415121876738
33. 51680708854858323072
34. 218922995834555169026
35. 927372692193078999176
36. 3928413764606871165730
37. 16641027750620563662096
38. 70492524767089125814114
39. 298611126818977066918552
40. 1264937032042997393488322
41. 5358359254990966640871840
42. 22698374052006863956975682
43. 96151855463018422468774568
44. 407305795904080553832073954
45. 1725375039079340637797070384
46. 7308805952221443105020355490
47. 30960598847965113057878492344
48. 131151201344081895336534324866
49. 555565404224292694404015791808
50. 2353412818241252672952597492098
51. 9969216677189303386214405760200
52. 42230279526998466217810220532898
53. 178890334785183168257455287891792
54. 757791618667731139247631372100066
55. 3210056809456107725247980776292056
56. 13598018856492162040239554477268290
57. 57602132235424755886206198685365216
58. 244006547798191185585064349218729154
59. 1033628323428189498226463595560281832
60. 4378519841510949178490918731459856482
61. 18547707689471986212190138521399707760
62. 78569350599398894027251472817058687522
63. 332825110087067562321196029789634457848
64. 1409869790947669143312035591975596518914
65. 5972304273877744135569338397692020533504
66. 25299086886458645685589389182743678652930
67. 107168651819712326877926895128666735145224
68. 453973694165307953197296969697410619233826
69. 1923063428480944139667114773918309212080528
70. 8146227408089084511865756065370647467555938
71. 34507973060837282187130139035400899082304280
72. 146178119651438213260386312206974243796773058
73. 619220451666590135228675387863297874269396512
74. 2623059926317798754175087863660165740874359106
75. 11111460156937785151929026842503960837766832936
76. 47068900554068939361891195233676009091941690850
77. 199387062373213542599493807777207997205533596336
78. 844617150046923109759866426342507997914076076194
79. 3577855662560905981638959513147239988861837901112
80. 15156039800290547036315704478931467953361427680642
81. 64202014863723094126901777428873111802307548623680
82. 271964099255182923543922814194423915162591622175362
83. 1152058411884454788302593034206568772452674037325128
84. 4880197746793002076754294951020699004973287771475874
85. 20672849399056463095319772838289364792345825123228624
86. 87571595343018854458033386304178158174356588264390370
87. 370959230771131880927453318055001997489772178180790104
88. 1571408518427546378167846658524186148133445300987550786
89. 6656593304481317393598839952151746590023553382130993248
90. 28197781736352815952563206467131172508227658829511523778
91. 119447720249892581203851665820676436622934188700177088360
92. 505988662735923140767969869749836918999964413630219877218
93. 2143402371193585144275731144820024112622791843221056597232
94. 9079598147510263717870894449029933369491131786514446266146
95. 38461794961234640015759308940939757590587318989278841661816
96. 162926777992448823780908130212788963731840407743629812913410
97. 690168906931029935139391829792095612517948949963798093315456
98. 2923602405716568564338475449381171413803636207598822186175234
99. 12384578529797304192493293627316781267732493780359086838016392
100. 52461916524905785334311649958648296484733611329035169538240802
Time: 0.00698620
That's the first 100 even Fibonacci numbers in ~7ms and includes the overhead of printing to terminal (easy to underestimate on Windows).
Based on the fact that fib(n) = fib(n-1)+fib(n-2), the straightforward solution is
def fib(n):
if (n <=1):
return(1)
else:
return(fib(n-1)+fib(n-2))
however, the problem here is that some values are calculated multiple times, and therefore it is very inefficient. The reason can be seen in this sketch:
Essentially, each recursive call to fib function has to compute all the previous fibonacci numbers for its own use. So, the most computed value will be fib(1) since it has to appear in all the leaf nodes of the tree shown by answer of #kqr. The complexity of this algorithm is the number of nodes of the tree, which is $O(2^n)$.
Now a better way is to keep track of two numbers, the current value and the previous value, so each call does not have to compute all the previous values. This is the second algorithm in the sketch, and can be implemented as follows
def fib(n):
if (n==0):
return(0,1)
elif (n==1):
return(1,1)
else:
a,b = fib(n-1)
return(b,a+b)
The complexity of this algorithm is linear $O(n)$, and some examples will be
>>> fib(1)
(1, 1)
>>> fib(2)
(1, 2)
>>> fib(4)
(3, 5)
>>> fib(6)
(8, 13)
I based this on an article on Fibonacci numbers on Wikipedia. The idea is to avoid looping and recursion and simply calculate the value as needed.
Not being a math wiz, selected one of the formulas and rendered it to code and tweaked it until the values came out right.
import cmath
def getFib(n):
#Given which fibonacci number we want, calculate its value
lsa = (1 / cmath.sqrt(5)) * pow(((1 + cmath.sqrt(5)) / 2), n)
rsa = (1 / cmath.sqrt(5)) * pow(((1 - cmath.sqrt(5)) / 2), n)
fib = lsa-rsa
#coerce to real so we can round the complex result
fn = round(fib.real)
return fn
#Demo using the function
s = ''
for m in range(0,30):
s = s + '(' + str(m) + ')' + str(getFib(m)) + ' '
print(s)
An O(1) solution
It turns out that there is a nice recursive formula for the sum of even Fibonacci numbers. The nth term in the sequence of sums of even Fibonacci numbers is S_{n} = 4*S_{n-1} + S_{n-2} + 2 Proof is left to the reader, but involves proving 1) even Fibo numbers are every third one, 2) proof of the formula above with induction using the definition of Fibo numbers. Using the logic from here, we can derive a closed-form formula for this with a little effort:
S_{n} = -1/2 + (1/4 + 3*sqrt(5)/20)*(2+sqrt(5))**n + (1/4 - 3*sqrt(5)/20)*(2-sqrt(5))**n
Despite the sqrt, this is integral for integral n, so this can be conveniently computed using the handy functions from my previous answer, or using a package such as sympy to handle the roots exactly.
import sympy as sp
one = sp.sympify(1) #to force casting to sympy types
k1 = -one/2
k2 = one/4 + 3*sp.sqrt(5)/20
k3 = one/4 - 3*sp.sqrt(5)/20
r1 = one
r2 = 2 + sp.sqrt(5)
r3 = 2 - sp.sqrt(5)
def even_sum_fibo(n):
#get the nth number in the sequence of even sums of Fibonacci numbers. If you want the sum of Fibos up to some number m, use n = m/3 (integer division)
return sp.simplify(k1*r1**n + k2*r2**n + k3*r3**n)
Here's a simple one without recursion and O(n)
def fibonacci(n):
a, b = 0, 1
for _ in range(n):
a, b = b, a + b
return a
Spoiler alert: don't read this if you're doing Project Euler Question 2 until you've had a crack at it yourself.
Closed-form series-summation-based approaches aside, this seems more efficient than most/all of what I've seen posted, as it only needs one rather cheap loop iteration per even Fibonacci number, so only 12 iterations to get to 4,000,000.
def sumOfEvenFibonacciNumbersUpTo(inclusiveLimit):
even = 0
next = 1
sum = 0
while even<=inclusiveLimit:
sum += even
even += next<<1
next = (even<<1)-next
return sum
import time
def calculate_fibonacci_1(n):
if n == 0:
return 0
if n == 1:
return 1
return calculate_fibonacci_1(n - 1) + calculate_fibonacci_1(n - 2)
def calculate_fibonacci_2(n):
fib = [0] * n
fib[0] = 1
fib[1] = 1
for i in range(2, n):
fib[i] = fib[i - 1] + fib[i - 2]
return fib[n-1]
def calculate_fibonacci_3(n):
a, b = 0, 1
for _ in range(n):
a, b = b, a + b
return a
def calculate_fibonacci_4(n):
v1, v2, v3 = 1, 1, 0
for rec in bin(n)[3:]:
calc = v2*v2
v1, v2, v3 = v1*v1+calc, (v1+v3)*v2, calc+v3*v3
if rec == '1':
v1, v2, v3 = v1+v2, v1, v2
return v2
def calculate_fibonacci_5(n):
if n == 0:
return (0, 1)
else:
a, b = calculate_fibonacci_5(n // 2)
c = a * (b * 2 - a)
d = a * a + b * b
if n % 2 == 0:
return (c, d)
else:
return (d, c + d)
n = 30
start = time.time()
calculate_fibonacci_1(n)
end = time.time()
print(end - start)
start = time.time()
calculate_fibonacci_2(n)
end = time.time()
print(end - start)
start = time.time()
calculate_fibonacci_3(n)
end = time.time()
print(end - start)
start = time.time()
calculate_fibonacci_4(n)
end = time.time()
print(end - start)
start = time.time()
calculate_fibonacci_5(n)
end = time.time()
print(end - start)
for n=30:
0.264876127243
6.19888305664e-06
8.10623168945e-06
7.15255737305e-06
4.05311584473e-06
for n=300:
>10s
3.19480895996e-05
1.78813934326e-05
7.15255737305e-06
6.19888305664e-06
for n=3000:
>10s
0.000766038894653
0.000277996063232
1.78813934326e-05
1.28746032715e-05
for n=30000:
>10s
0.0550990104675
0.0153529644012
0.000290870666504
0.000216007232666
for n=300000:
>10s
3.35211610794
0.979753017426
0.012097120285
0.00845909118652
for n=3000000:
>10s
>10s
>10s
0.466345071793
0.355515003204
for n=30000000:
>100s
>100s
>100s
16.4943139553
12.6505448818
disclaimer: codes of functions no. 4 and 5 were not written by me
kqr's solution nr 2 is my definite favourite.
However in this specific case we are loosing all our calculations between consequent calls within the list comprehension:
list2 = [i for i in list1 if fib(i) % 2 == 0]
, so I decided to go one step further and memoize it between loop steps as follows:
def cache_fib(ff):
comp = {0: 0, 1: 1}
def fib_cached(n, computed=comp):
return ff(n, computed)
return fib_cached
#cache_fib
def fib(n, computed={0: 0, 1: 1}):
if n not in computed:
computed[n] = fib(n - 1, computed) + fib(n - 2, computed)
return computed[n]
Solution in R, benchmark calculates 1 to 1000th Fibonacci number series in 1.9 seconds. Would be much faster in C++ or Fortran, in fact, since writing the initial post, I wrote an equivalent function in C++ which completed in an impressive 0.0033 seconds, even python completed in 0.3 seconds.
#Calculate Fibonnaci Sequence
fib <- function(n){
if(n <= 2)
return(as.integer(as.logical(n)))
k = as.integer(n/2)
a = fib(k + 1)
b = fib(k)
if(n %% 2 == 1)
return(a*a + b*b)
return(b*(2*a - b))
}
#Function to do every fibonacci number up to nmax
doFib <- function(nmax = 25,doPrint=FALSE){
res = sapply(0:abs(nmax),fib)
if(doPrint)
print(paste(res,collapse=","))
return(res)
}
#Benchmark
system.time(doFib(1000))
#user system elapsed
# 1.874 0.007 1.892
There is an O(1) solution: https://en.wikipedia.org/wiki/Fibonacci_number#Computation_by_rounding
import math
PHI = (1 + math.sqrt(5)) / 2
SQRT5 = math.sqrt(5)
def fast_fib(n):
if n < 0:
raise ValueError('Fibs for negative values are not defined.')
return round(math.pow(PHI, n) / SQRT5)
I realize this question was asked 8 years ago and it's been thoroughly answered… sorry to bounce it back up to the top. But there is always more to be said. I came across this in a search to improve my own algorithm, which I'd like to share.
I'd like to offer my own take since I see this wasn't really brought up. I think my algorithm is unique amongst the contributors thus far. I make use of well known Fibonacci number equations (wikipedia) in order to scale down the index. One or two others briefly cover a basic version, but I take it a step further.
This is a recursive algorithm, but I'm able to calculate Fib(2 million) in 0.15 seconds, Fib(10 million) in under 2 seconds, and Fib(100 million) in 75 seconds. All without error. I will say this, it isn't the fastest for calculating a whole list of consecutive Fibonacci numbers; this is best for picking out individuals that are very large.
Most algorithms mentioned so far - no matter how fast they may be - struggle to get above Fib(100) without recursion depth issues. A couple of contributors have eluded to parts of my algorithm, though they have some disadvantages that mine doesn't. Not saying mines the best or anything, but I think it's quite fast and can calculate really large fibs. I think it's worth adding to the discussion.
Best of all, I don't make any use of memory. No lists, dictionaries or arrays of any kind. No caches or memoization. Not even a single persistent saved constant. No special packages imported. Just basic, plain, python with basic integer types. Ive also extended the function to compute negative fibs with negligible impact to run time.
I should warn though… I'm a mathematician, not a programmer. I have no doubts this can be improved further. And I have no idea what the Big O is.
def fib(n):
if n<0: return int(pow(-1, (n&1)+1))*fib(-n)
if n == 0: return 0
if n==1 or n==2: return 1
if n==3: return 2
# n is multiple of 3
if n%3 == 0:
third = n//3
fibthird = fib(third)
return 5*pow(fibthird,3) + 3*pow(-1, third)*fibthird
# even n
if n&1==0:
return pow(fib((n>>1) + 1),2) - pow(fib((n>>1) - 1), 2)
# for odd n
return ( pow(fib((n>>1)+1),2) + pow(fib(n>>1),2) )
Run the code, tell me what you think. I'd love to hear from the community. I'm impressed by it, personally, and have been running it for a while. Can't find a way in my limited (programming) knowledge to improve it though. Trying to add lists, memoization, caches, etc., either fails to improve anything, or makes runtime worse. In the rare instance I find something that improves runtime, the benefits to runtime are negligible and the costs to memory are significant, and I don't think it's a fair trade.
Prime testing
For added fun, I include a basic probabilistic is_prime test below that relates to Fibonacci numbers:
def is_prime_fib(n):
# Fibonacci Probabilistic is_prime test. Compositeness deterministic.
if n==1: return False
if n==5: return True
if n%5 in [1,4] and fib(n-1) % n == 0: return True
if n%5 in [2,3] and fib(n+1) % n == 0: return True
return False
I include this just for fun even though its off topic. Its a well-known primality test using fibonacci numbers, but unfortunately it goes unused precisely because most fibonacci calculating algorithms are slow, cause recursion error, or otherwise produce inaccuracies, thus making the test unreliable and we naturally resort to other algorithms. I think the game can be changed a bit though.
On its own, the Fibonacci primality test is probabilistic. The n=1 and n=5 cases are oddities that fail to produce correct results, but they are too obvious to worry about. Aside from that, a False is deterministic in compositeness, a True is probabilistic in primeness. A composite that passes as true by this test is a Fibonacci Pseudoprime. In conjunction with other probabilistic tests, we can achieve emergent determinism.
Any problems like this will take a long time to run if there are a lot of levels of recursion. The recursive definition is good for coding the problem in a way that can be easily understood, but if you need it to run faster an iterative solution such as the answer in this thread will be much quicker.
Recursively calculating Fibonacci will be most inefficient than doing iteratively. My recommendation is:
Take the time to create a Fibonacci class as an iterator, and do the calculations independently for each element in the index, maybe with some #memoize decorator (and also here) to cache all previous calculations.
Hope this helps!
One fast way is to calculate the fib(n/2) number recursively:
fibs = {0: 0, 1: 1}
def fib(n):
if n in fibs: return fibs[n]
if n % 2 == 0:
fibs[n] = ((2 * fib((n / 2) - 1)) + fib(n / 2)) * fib(n / 2)
return fibs[n]
else:
fibs[n] = (fib((n - 1) / 2) ** 2) + (fib((n+1) / 2) ** 2)
return fibs[n]
from time import time
s=time()
print fib(1000000)
print time()-s
Haskell 1 liner :-
fibs = 0 : (f 1 1) where f a b = a : f b (a+b)
This code is extremely efficient and calculates Fibonacci numbers up to (10^1000) in less than a second !
This code will also be useful for this problem in Project Euler.
To find the sum of the first n even-valued fibonacci numbers directly, put 3n + 2 in your favourite method to efficiently compute a single fibonacci number, decrement by one and divide by two (fib((3*n+2) - 1)/2)). How did math dummies survive before OEIS?
This is some improved version of Fibonacci where we compute Fibonacci of number only once:
dicFib = { 0:0 ,1 :1 }
iterations = 0
def fibonacci(a):
if (a in dicFib):
return dicFib[a]
else :
global iterations
fib = fibonacci(a-2)+fibonacci(a-1)
dicFib[a] = fib
iterations += 1
return fib
print ("Fibonacci of 10 is:" , fibonacci(10))
print ("Fibonacci of all numbers:" ,dicFib)
print ("iterations:" ,iterations)
# ('Fibonacci of 10 is:', 55)
# ('Fibonacci of all numbers:', {0: 0, 1: 1, 2: 1, 3: 2, 4: 3, 5: 5, 6: 8, 7: 13, 8: 21, 9: 34, 10: 55})
# ('iterations:', 9)
Here we are storing Fibonacci of each number in dictionary. So you can see it calculates only once for each iteration and for Fibonacci(10) it is only 9 times.
O(1) SOLUTION
The formula is also called Binet's Formula (read more)
Basically, we can write it in python like this:
def fib(n):
a = ((1 + (5 ** 0.5)) / 2)**int(n)
b = ((1 - (5 ** 0.5)) / 2)**int(n)
return round((a - b) / (5 ** 0.5))
However, Because of the relatively low value of b, we can ignore it and the function can be as simple as
def fib(n):
return round((((1+(5**0.5))/2)**int(n))/(5**0.5))
You can use the equation with square roots to compute this if you don't use floating point arithmetic, but keep track of the coefficients some other way as you go. This gives an O(log n) arithmetic operation (as opposed to O(n log n) operations for memoization) algorithm.
def rootiply(a1,b1,a2,b2,c):
''' multipy a1+b1*sqrt(c) and a2+b2*sqrt(c)... return a,b'''
return a1*a2 + b1*b2*c, a1*b2 + a2*b1
def rootipower(a,b,c,n):
''' raise a + b * sqrt(c) to the nth power... returns the new a,b and c of the result in the same format'''
ar,br = 1,0
while n != 0:
if n%2:
ar,br = rootiply(ar,br,a,b,c)
a,b = rootiply(a,b,a,b,c)
n /= 2
return ar,br
def fib(k):
''' the kth fibonacci number'''
a1,b1 = rootipower(1,1,5,k)
a2,b2 = rootipower(1,-1,5,k)
a = a1-a2
b = b1-b2
a,b = rootiply(0,1,a,b,5)
# b should be 0!
assert b == 0
return a/2**k/5
if __name__ == "__main__":
assert rootipower(1,2,3,3) == (37,30) # 1+2sqrt(3) **3 => 13 + 4sqrt(3) => 39 + 30sqrt(3)
assert fib(10)==55
Just another one fast solution:
def fibonnaci(n):
a = []
while n != 1:
a.append(n&1)
n >>= 1
f1 = 1
f2 = 1
while a:
t = f1 * (f2 * 2 - f1)
f2 = f2 * f2 + f1 * f1
if a.pop() is 1:
f1 = f2
f2 += t
else:
f1 = t
return f1
I had done a little research and found out about a formula called Binet's formula.
This formula can calculate the nth number of the fibonacci sequence easily in O(1) time.
Here is my Java code translated to Python:
def fibonacci(n):
five_sqrt = 5 ** 0.5
return int(round((((1 + five_sqrt)/2) ** n)/five_sqrt))
for i in range(1, 21):
print(fibonacci(i))
Output:
1,
1,
2,
3,
5,
8,
13,
21,
34,
55,
89,
144,
233,
377,
610,
987,
1597,
2584,
4181,
6765
I know this is an old question but I figured I would give it a go anyways.
First, some basics. Every third Fibonacci number is even. Since F(1)+F(2)=F(3), F(4)+F(5)=F(6), etc, all the even Fibonacci numbers make up half the total sum of all Fibonacci numbers up to F(3X). We already have an easy way to find the sum of all Fibonacci numbers up to F(X). The answer is F(X+2)-1. All we have to do is divide that term by two and we have our answer.
Now a little sidetracking to how we solve Fibonacci in O(log2(X)) time. Phi is a very special number. Phi=(sqrt(5)+1)/2. Phi^2=1+Phi. In fact, Phi^X=F(X-1)+F(X)Phi. Bringing back highschool algebra, we know Phi^2X=(Phi^X)^2 = (F(X-1)+F(X)Phi)^2 = F(X-1)^2+2F(X-1)F(X)Phi+(F(X)^2)(Phi^2). We know Phi^2, so substitute and distribute. F(2X-1)+F(2X)Phi=Phi^2X=F(X-1)^2+F(X)^2+Phi(2F(X-1)F(X)+F(X)^2). Since Fibonacci numbers are integers that don't contain Phi, we now know that F(2X-1)=F(X-1)^2+F(X)^2. With the additional fact that F(2X+1)=F(X)+F(X+1), we can find F(2X)=F(X+1)^2-F(X-1)^2. Now lets code!
import math
def fibonacci(x):
a=1 #start at F(-1)
b=0 #start at F(0)
c=1 #start at F(1)
bits=int((math.log2(x)+1)//1) #number of bits in x
for i in range(bits,-1,-1):
#Times 2
d=b*b+a*a
e=c*c-a*a
f=d+e
a=d
b=e
c=f
bit=(x//(2**i))%2
#Plus 1
if bit==1:
a=b
b=c
c=a+b
return b
def fibsum(x):
y=x-(x%3)
return (fibonacci(y+2)-1)//2
print(fibsum(600))
Since Python 3.9, you can use the cache decorator. From the docs:
Returns the same as lru_cache(maxsize=None), creating a thin wrapper around a dictionary lookup for the function arguments. Because it never needs to evict old values, this is smaller and faster than lru_cache() with a size limit.
from functools import cache
#cache
def fibonacci(n):
if (n==2) or (n==1):
return 1
else:
return fibonacci(n-1) + fibonacci(n-2)
Although a late answer but it might be helpful
fib_dict = {}
def fib(n):
try:
return fib_dict[n]
except:
if n<=1:
fib_dict[n] = n
return n
else:
fib_dict[n] = fib(n-1) + fib (n-2)
return fib(n-1) + fib (n-2)
print fib(100)
This is much faster than the traditional way
Given the starting number and the maximum number; I think the following solution for fibonacci would be interesting. The good thing is that it doesn't include recursion - thus reducing memory burden.
# starting number is a
# largest number in the fibonacci sequence is b
def fibonacci(a,b):
fib_series = [a, a]
while sum(fib_series[-2:]) <=b:
next_fib = sum(fib_series[-2:])
fib_series.append(next_fib)
return fib_series
print('the fibonacci series for the range %s is %s'
%([3, 27], fibonacci(3, 27)))
the fibonacci series for the range [1, 12] is [3, 3, 6, 9, 15, 24]
Here is an Optimized Solution with the Dictionary
def Fibonacci(n):
if n<2 : return n
elif not n in fib_dict :
fib_dict[n]= Fibonacci(n-1) + Fibonacci(n-2)
return fib_dict[n]
#dictionary which store Fibonacci values with the Key
fib_dict = {}
print(Fibonacci(440))
This is much faster than everything above
from sympy import fibonacci
%timeit fibonacci(10000)
262 ns ± 10.8 ns per loop (mean ± std. dev. of 7 runs, 1000000 loops each)
Here are some more formulas, from OEIS:
F(n) = ((1+sqrt(5))^n - (1-sqrt(5))^n)/(2^n*sqrt(5))
Alternatively, F(n) = ((1/2+sqrt(5)/2)^n - (1/2-sqrt(5)/2)^n)/sqrt(5)
F(n) = round(phi^n/sqrt(5)); where phi is (1 + sqrt(5)) / 2
F(n+1) = Sum_{j=0..floor(n/2)} binomial(n-j, j)
Some of these formulas have implementations in the other comments above.

Function for factorial in Python

How do I go about computing a factorial of an integer in Python?
The easiest way is to use math.factorial (available in Python 2.6 and above):
import math
math.factorial(1000)
If you want/have to write it yourself, you can use an iterative approach:
def factorial(n):
fact = 1
for num in range(2, n + 1):
fact *= num
return fact
or a recursive approach:
def factorial(n):
if n < 2:
return 1
else:
return n * factorial(n-1)
Note that the factorial function is only defined for positive integers, so you should also check that n >= 0 and that isinstance(n, int). If it's not, raise a ValueError or a TypeError respectively. math.factorial will take care of this for you.
On Python 2.6 and up, try:
import math
math.factorial(n)
Existing solution
The shortest and probably the fastest solution is:
from math import factorial
print factorial(1000)
Building your own
You can also build your own solution. Generally you have two approaches. The one that suits me best is:
from itertools import imap
def factorial(x):
return reduce(long.__mul__, imap(long, xrange(1, x + 1)))
print factorial(1000)
(it works also for bigger numbers, when the result becomes long)
The second way of achieving the same is:
def factorial(x):
result = 1
for i in xrange(2, x + 1):
result *= i
return result
print factorial(1000)
def factorial(n):
if n < 2:
return 1
return n * factorial(n - 1)
For performance reasons, please do not use recursion. It would be disastrous.
def fact(n, total=1):
while True:
if n == 1:
return total
n, total = n - 1, total * n
Check running results
cProfile.run('fact(126000)')
4 function calls in 5.164 seconds
Using the stack is convenient (like recursive call), but it comes at a cost: storing detailed information can take up a lot of memory.
If the stack is high, it means that the computer stores a lot of information about function calls.
The method only takes up constant memory (like iteration).
Or using a 'for' loop
def fact(n):
result = 1
for i in range(2, n + 1):
result *= i
return result
Check running results
cProfile.run('fact(126000)')
4 function calls in 4.708 seconds
Or using the built-in function math
def fact(n):
return math.factorial(n)
Check running results
cProfile.run('fact(126000)')
5 function calls in 0.272 seconds
If you are using Python 2.5 or older, try
from operator import mul
def factorial(n):
return reduce(mul, range(1, n+1))
For newer versions of Python, there is factorial in the math module as given in other answers here.
def fact(n):
f = 1
for i in range(1, n + 1):
f *= i
return f
Another way to do it is to use np.prod shown below:
def factorial(n):
if n == 0:
return 1
else:
return np.prod(np.arange(1,n+1))
Non-recursive solution, no imports:
def factorial(x):
return eval(' * '.join(map(str, range(1, x + 1))))
You can also make it in one line recursively if you like it. It is just a matter of personal choice. Here we are using inline if else in Python, which is similar to the ternary operator in Java:
Expression1 ? Expression2 : Expression3
One line function call approach:
def factorial(n): return 1 if n == 0 else n * factorial(n-1)
One line lambda function approach:
(although it is not recommended to assign lambda functions directly to a name, as it is considered a bad practice and may bring inconsistency to your code. It's always good to know. See PEP8.)
factorial = lambda n: 1 if n == 0 else n * factorial(n-1)

finding the greatest Fibonacci number within limited time in python

I need a code that calculates nth fibonacci number as well as giving me the time used to calculate it, in python.
def fib(n):
if n==0 or n==1: return 1
else: return fib(n-1)+fib(n-2)
The calculation of the number step must use a such method.
This is a classic dynamic programming/recursion with memoization problem. Notice that in your code, you recursively call fib(x-1) a lot. This is a huge waste of effort: once you calculate it once, you should store it for later use so that you don't have to calculate it again. In Python 3 you can do this with the glorious functools.lru_cache
#lru_cache(maxsize=None)
def fib(n):
if n < 1:
return n
else:
return fib(n - 1) + fib(n - 2)
Unfortunately, since nobody uses Python 3.2 yet, you'll have to write your own. Here's some pseudocode:
cache = {0: 0, 1: 1}
def fib(n):
if n in cache:
return the cached value
else:
calculate fib(n) recursively
store the value in the cache
return the value
This technique is known as recursion with memoization. Equivalently, you can use dynamic programming: calculate the values from the bottom up:
fibs = [0, 1]
for i in range(2, n):
calculate fibs[i] using the previous values in fibs
append the new value
To time these functions, put them in a module (a file ending in .py) and use timeit from the command line:
(change directory to the one containing your module)
python -mtimeit "import <name of module>" "fib(3000)"
By the way, there is a closed-form expression for the nth Fibonacci number, which may prove faster/more useful:
where
Use the timeit module to time the function:
import timeit
def fib(x):
if x==0 or x==1: return 1
else: return fib(x-1)+fib(x-2)
print timeit.Timer('fib(5)', 'from __main__ import fib').timeit()
Output:
3.12172317505
To directly answer the question in the title, you can use time.time() to get the current time since the epoch in seconds and keep calculating the subsequent fibonacci number until the time limit is reached. I've chosen to use an efficient method of computing fibonacci numbers below to give you a better demonstrating of this concept.
def fibTimeLimited(limit):
start = time.time()
n, f0, f1 = 1, 0, 1
while time.time() < start + limit:
n += 1
f0, f1 = f1, f0+f1
return (n, f1)
Sample output:
Calculated 1st fibonacci number as 1 in 0.000001 seconds
Calculated 31st fibonacci number as 1346269 in 0.000010 seconds
Calculated 294th fibonacci number as 12384578529797304192493293627316781267732493780359086838016392 in 0.000100 seconds
Here is a very simple example that uses Python tuples instead of recursion.
import time
def fib(n):
cnt = 1
if n == 0:
return a
a = 0
b = 1
while n > cnt:
(a, b) = (b, b+a)
cnt += 1
return b
start = time.time()
result = fib(15)
runTime = time.time() - start
print result, runTime

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