Import arabic CSV file using python - python

I have a .CSV file containing Arabic data and I need to view this file in jupyter using python and pandas.
But I have a problem with the encoding
What should I do ? any ideas please ?
This is my code
And this is the error

you might need to save the original CSV file as mentioned in this link
CSV file with Arabic characters is displayed as symbols in Excel

I have never encountered a problem like this before, but it seems that it is a problem in the decoding.
Check this question, it might help.
What you can always do is to check the encoding of your file; maybe is something else and not 'utf-8'.
The following code will help you do this:
from bs4 import UnicodeDammit
filename="absolute_path_of_your_file"
with open(filename, "rb") as file:
content = file.read()
suggestion = UnicodeDammit(content)
suggestion.original_encoding
The output will be the encoding of your file. I hope it helps and that I've correctly understood your problem.

Given that the decoder fails at character 15, I wonder if your file is correctly encoded as UTF-8, but then has some improperly encoded byte(s).
I was just dealing with this myself when a program improperly handled the RIGHT SINGLE QUOTATION MARK and wrote some corrupted UTF-8. I didn't know this till I ran it through a process in Python and got an error similar to yours:
UnicodeDecodeError: 'utf-8' codec can't decode byte 0xd5 in position 16: invalid continuation byte
Here's the bad text, which I've copied from VSCode:
Community Member�s monthly
So VSCode and Python cannot make sense of it. But everything else is obviously fine.
Here's a small-ish test you can run on your input file to see if the first 15-or-so characters are properly encoded as UTF-8. It uses and incremental decoder to build up a Unicode character byte-by-byte.
s starts as None, then when enough valid bytes have been passed in, the decoder returns the complete character, buffer keeps track of bytes that have been read but not decoded:
decoder = codecs.getincrementaldecoder("utf-8")()
with open("bad.txt", "rb") as f:
s = None
start = 0
b = f.read(1)
buffer = [b]
while b:
try:
s = decoder.decode(b, final=False)
except UnicodeDecodeError:
print(f"{start}-{start+len(buffer)}: error, could not decode byte(s) {buffer}")
sys.exit(1)
if s:
print(f"{start}-{start+len(buffer)}: {s}")
start += len(buffer)
buffer = []
b = f.read(1)
buffer.append(b)
When I run that on the sample text I included earlier, I get:
0-1: C
1-2: o
2-3: m
3-4: m
4-5: u
5-6: n
6-7: i
7-8: t
8-9: y
9-10:
10-11: M
11-12: e
12-13: m
13-14: b
14-15: e
15-16: r
16-18: error, could not decode byte(s) [b'\xd5', b's']
If you do see valid Arabic text before the error, then you'll need to manually pull out the bad characters and try again. Or, find the source and see if you can get it re-encoded properly.

Related

Why am I keep getting a UnicodeDecodeError in pandas read_csv() function even though I specified the correct encoding parameter? [duplicate]

Why is the below item failing? Why does it succeed with "latin-1" codec?
o = "a test of \xe9 char" #I want this to remain a string as this is what I am receiving
v = o.decode("utf-8")
Which results in:
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "C:\Python27\lib\encodings\utf_8.py",
line 16, in decode
return codecs.utf_8_decode(input, errors, True) UnicodeDecodeError:
'utf8' codec can't decode byte 0xe9 in position 10: invalid continuation byte
I had the same error when I tried to open a CSV file by pandas.read_csv
method.
The solution was change the encoding to latin-1:
pd.read_csv('ml-100k/u.item', sep='|', names=m_cols , encoding='latin-1')
In binary, 0xE9 looks like 1110 1001. If you read about UTF-8 on Wikipedia, you’ll see that such a byte must be followed by two of the form 10xx xxxx. So, for example:
>>> b'\xe9\x80\x80'.decode('utf-8')
u'\u9000'
But that’s just the mechanical cause of the exception. In this case, you have a string that is almost certainly encoded in latin 1. You can see how UTF-8 and latin 1 look different:
>>> u'\xe9'.encode('utf-8')
b'\xc3\xa9'
>>> u'\xe9'.encode('latin-1')
b'\xe9'
(Note, I'm using a mix of Python 2 and 3 representation here. The input is valid in any version of Python, but your Python interpreter is unlikely to actually show both unicode and byte strings in this way.)
It is invalid UTF-8. That character is the e-acute character in ISO-Latin1, which is why it succeeds with that codeset.
If you don't know the codeset you're receiving strings in, you're in a bit of trouble. It would be best if a single codeset (hopefully UTF-8) would be chosen for your protocol/application and then you'd just reject ones that didn't decode.
If you can't do that, you'll need heuristics.
Because UTF-8 is multibyte and there is no char corresponding to your combination of \xe9 plus following space.
Why should it succeed in both utf-8 and latin-1?
Here how the same sentence should be in utf-8:
>>> o.decode('latin-1').encode("utf-8")
'a test of \xc3\xa9 char'
If this error arises when manipulating a file that was just opened, check to see if you opened it in 'rb' mode
Use this, If it shows the error of UTF-8
pd.read_csv('File_name.csv',encoding='latin-1')
utf-8 code error usually comes when the range of numeric values exceeding 0 to 127.
the reason to raise this exception is:
1)If the code point is < 128, each byte is the same as the value of the code point.
2)If the code point is 128 or greater, the Unicode string can’t be represented in this encoding. (Python raises a UnicodeEncodeError exception in this case.)
In order to to overcome this we have a set of encodings, the most widely used is "Latin-1, also known as ISO-8859-1"
So ISO-8859-1 Unicode points 0–255 are identical to the Latin-1 values, so converting to this encoding simply requires converting code points to byte values; if a code point larger than 255 is encountered, the string can’t be encoded into Latin-1
when this exception occurs when you are trying to load a data set ,try using this format
df=pd.read_csv("top50.csv",encoding='ISO-8859-1')
Add encoding technique at the end of the syntax which then accepts to load the data set.
Well this type of error comes when u are taking input a particular file or data in pandas such as :-
data=pd.read_csv('/kaggle/input/fertilizers-by-product-fao/FertilizersProduct.csv)
Then the error is displaying like this :-
UnicodeDecodeError: 'utf-8' codec can't decode byte 0xf4 in position 1: invalid continuation byte
So to avoid this type of error can be removed by adding an argument
data=pd.read_csv('/kaggle/input/fertilizers-by-product-fao/FertilizersProduct.csv', encoding='ISO-8859-1')
This happened to me also, while i was reading text containing Hebrew from a .txt file.
I clicked: file -> save as and I saved this file as a UTF-8 encoding
TLDR: I would recommend investigating the source of the problem in depth before switching encoders to silence the error.
I got this error as I was processing a large number of zip files with additional zip files in them.
My workflow was the following:
Read zip
Read child zip
Read text from child zip
At some point I was hitting the encoding error above. Upon closer inspection, it turned out that some child zips erroneously contained further zips. Reading these zips as text lead to some funky character representation that I could silence with encoding="latin-1", but which in turn caused issues further down the line. Since I was working with international data it was not completely foolish to assume it was an encoding problem (I had problems with 0xc2: Â), but in the end it was not the actual issue.
In this case, I tried to execute a .py which active a path/file.sql.
My solution was to modify the codification of the file.sql to "UTF-8 without BOM" and it works!
You can do it with Notepad++.
i will leave a part of my code.
con = psycopg2.connect(host = sys.argv[1],
port = sys.argv[2],dbname = sys.argv[3],user = sys.argv[4], password = sys.argv[5])
cursor = con.cursor()
sqlfile = open(path, 'r')
I encountered this problem, and it turned out that I had saved my CSV directly from a google sheets file. In other words, I was in a google sheet file. I chose, save a copy, and then when my browser downloaded it, I chose Open. Then, I DIRECTLY saved the CSV. This was the wrong move.
What fixed it for me was first saving the sheet as an .xlsx file on my local computer, and from there exporting single sheet as .csv. Then the error went away for pd.read_csv('myfile.csv')
The solution was change to "UTF-8 sin BOM"

Python3 using UTF-8 data from bytes [duplicate]

Why is the below item failing? Why does it succeed with "latin-1" codec?
o = "a test of \xe9 char" #I want this to remain a string as this is what I am receiving
v = o.decode("utf-8")
Which results in:
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "C:\Python27\lib\encodings\utf_8.py",
line 16, in decode
return codecs.utf_8_decode(input, errors, True) UnicodeDecodeError:
'utf8' codec can't decode byte 0xe9 in position 10: invalid continuation byte
I had the same error when I tried to open a CSV file by pandas.read_csv
method.
The solution was change the encoding to latin-1:
pd.read_csv('ml-100k/u.item', sep='|', names=m_cols , encoding='latin-1')
In binary, 0xE9 looks like 1110 1001. If you read about UTF-8 on Wikipedia, you’ll see that such a byte must be followed by two of the form 10xx xxxx. So, for example:
>>> b'\xe9\x80\x80'.decode('utf-8')
u'\u9000'
But that’s just the mechanical cause of the exception. In this case, you have a string that is almost certainly encoded in latin 1. You can see how UTF-8 and latin 1 look different:
>>> u'\xe9'.encode('utf-8')
b'\xc3\xa9'
>>> u'\xe9'.encode('latin-1')
b'\xe9'
(Note, I'm using a mix of Python 2 and 3 representation here. The input is valid in any version of Python, but your Python interpreter is unlikely to actually show both unicode and byte strings in this way.)
It is invalid UTF-8. That character is the e-acute character in ISO-Latin1, which is why it succeeds with that codeset.
If you don't know the codeset you're receiving strings in, you're in a bit of trouble. It would be best if a single codeset (hopefully UTF-8) would be chosen for your protocol/application and then you'd just reject ones that didn't decode.
If you can't do that, you'll need heuristics.
Because UTF-8 is multibyte and there is no char corresponding to your combination of \xe9 plus following space.
Why should it succeed in both utf-8 and latin-1?
Here how the same sentence should be in utf-8:
>>> o.decode('latin-1').encode("utf-8")
'a test of \xc3\xa9 char'
If this error arises when manipulating a file that was just opened, check to see if you opened it in 'rb' mode
Use this, If it shows the error of UTF-8
pd.read_csv('File_name.csv',encoding='latin-1')
utf-8 code error usually comes when the range of numeric values exceeding 0 to 127.
the reason to raise this exception is:
1)If the code point is < 128, each byte is the same as the value of the code point.
2)If the code point is 128 or greater, the Unicode string can’t be represented in this encoding. (Python raises a UnicodeEncodeError exception in this case.)
In order to to overcome this we have a set of encodings, the most widely used is "Latin-1, also known as ISO-8859-1"
So ISO-8859-1 Unicode points 0–255 are identical to the Latin-1 values, so converting to this encoding simply requires converting code points to byte values; if a code point larger than 255 is encountered, the string can’t be encoded into Latin-1
when this exception occurs when you are trying to load a data set ,try using this format
df=pd.read_csv("top50.csv",encoding='ISO-8859-1')
Add encoding technique at the end of the syntax which then accepts to load the data set.
Well this type of error comes when u are taking input a particular file or data in pandas such as :-
data=pd.read_csv('/kaggle/input/fertilizers-by-product-fao/FertilizersProduct.csv)
Then the error is displaying like this :-
UnicodeDecodeError: 'utf-8' codec can't decode byte 0xf4 in position 1: invalid continuation byte
So to avoid this type of error can be removed by adding an argument
data=pd.read_csv('/kaggle/input/fertilizers-by-product-fao/FertilizersProduct.csv', encoding='ISO-8859-1')
This happened to me also, while i was reading text containing Hebrew from a .txt file.
I clicked: file -> save as and I saved this file as a UTF-8 encoding
TLDR: I would recommend investigating the source of the problem in depth before switching encoders to silence the error.
I got this error as I was processing a large number of zip files with additional zip files in them.
My workflow was the following:
Read zip
Read child zip
Read text from child zip
At some point I was hitting the encoding error above. Upon closer inspection, it turned out that some child zips erroneously contained further zips. Reading these zips as text lead to some funky character representation that I could silence with encoding="latin-1", but which in turn caused issues further down the line. Since I was working with international data it was not completely foolish to assume it was an encoding problem (I had problems with 0xc2: Â), but in the end it was not the actual issue.
In this case, I tried to execute a .py which active a path/file.sql.
My solution was to modify the codification of the file.sql to "UTF-8 without BOM" and it works!
You can do it with Notepad++.
i will leave a part of my code.
con = psycopg2.connect(host = sys.argv[1],
port = sys.argv[2],dbname = sys.argv[3],user = sys.argv[4], password = sys.argv[5])
cursor = con.cursor()
sqlfile = open(path, 'r')
I encountered this problem, and it turned out that I had saved my CSV directly from a google sheets file. In other words, I was in a google sheet file. I chose, save a copy, and then when my browser downloaded it, I chose Open. Then, I DIRECTLY saved the CSV. This was the wrong move.
What fixed it for me was first saving the sheet as an .xlsx file on my local computer, and from there exporting single sheet as .csv. Then the error went away for pd.read_csv('myfile.csv')
The solution was change to "UTF-8 sin BOM"

Error UnicodeDecodeError: 'utf-8' codec can't decode byte 0xff in position 0: invalid start byte

https://github.com/affinelayer/pix2pix-tensorflow/tree/master/tools
An error occurred when compiling "process.py" on the above site.
python tools/process.py --input_dir data -- operation resize --outp
ut_dir data2/resize
data/0.jpg -> data2/resize/0.png
Traceback (most recent call last):
File "tools/process.py", line 235, in <module>
main()
File "tools/process.py", line 167, in main
src = load(src_path)
File "tools/process.py", line 113, in load
contents = open(path).read()
File"/home/user/anaconda3/envs/tensorflow_2/lib/python3.5/codecs.py", line 321, in decode
(result, consumed) = self._buffer_decode(data, self.errors, final)
UnicodeDecodeError: 'utf-8' codec can't decode byte 0xff in position 0: invalid start byte
What is the cause of the error?
Python's version is 3.5.2.
Python tries to convert a byte-array (a bytes which it assumes to be a utf-8-encoded string) to a unicode string (str). This process of course is a decoding according to utf-8 rules. When it tries this, it encounters a byte sequence which is not allowed in utf-8-encoded strings (namely this 0xff at position 0).
Since you did not provide any code we could look at, we only could guess on the rest.
From the stack trace we can assume that the triggering action was the reading from a file (contents = open(path).read()). I propose to recode this in a fashion like this:
with open(path, 'rb') as f:
contents = f.read()
That b in the mode specifier in the open() states that the file shall be treated as binary, so contents will remain a bytes. No decoding attempt will happen this way.
Use this solution it will strip out (ignore) the characters and return the string without them. Only use this if your need is to strip them not convert them.
with open(path, encoding="utf8", errors='ignore') as f:
Using errors='ignore'
You'll just lose some characters. but if your don't care about them as they seem to be extra characters originating from a the bad formatting and programming of the clients connecting to my socket server.
Then its a easy direct solution.
reference
Use encoding format ISO-8859-1 to solve the issue.
Had an issue similar to this, Ended up using UTF-16 to decode. my code is below.
with open(path_to_file,'rb') as f:
contents = f.read()
contents = contents.rstrip("\n").decode("utf-16")
contents = contents.split("\r\n")
this would take the file contents as an import, but it would return the code in UTF format. from there it would be decoded and seperated by lines.
I've come across this thread when suffering the same error, after doing some research I can confirm, this is an error that happens when you try to decode a UTF-16 file with UTF-8.
With UTF-16 the first characther (2 bytes in UTF-16) is a Byte Order Mark (BOM), which is used as a decoding hint and doesn't appear as a character in the decoded string. This means the first byte will be either FE or FF and the second, the other.
Heavily edited after I found out the real answer
It simply means that one chose the wrong encoding to read the file.
On Mac, use file -I file.txt to find the correct encoding. On Linux, use file -i file.txt.
I had a similar issue with PNG files. and I tried the solutions above without success.
this one worked for me in python 3.8
with open(path, "rb") as f:
use only
base64.b64decode(a)
instead of
base64.b64decode(a).decode('utf-8')
This is due to the different encoding method when read the file. In python, it defaultly
encode the data with unicode. However, it may not works in various platforms.
I propose an encoding method which can help you solve this if 'utf-8' not works.
with open(path, newline='', encoding='cp1252') as csvfile:
reader = csv.reader(csvfile)
It should works if you change the encoding method here. Also, you can find other encoding method here standard-encodings , if above doesn't work for you.
Those getting similar errors while handling Pandas for data frames use the following solution.
example solution.
df = pd.read_csv("File path", encoding='cp1252')
I had this UnicodeDecodeError while trying to read a '.csv' file using pandas.read_csv(). In my case, I could not manage to overcome this issue using other encoder types. But instead of using
pd.read_csv(filename, delimiter=';')
I used:
pd.read_csv(open(filename, 'r'), delimiter=';')
which just seems working fine for me.
Note that: In open() function, use 'r' instead of 'rb'. Because 'rb' returns bytes object that causes to happen this decoder error in the first place, that is the same problem in the read_csv(). But 'r' returns str which is needed since our data is in .csv, and using the default encoding='utf-8' parameter, we can easily parse the data using read_csv() function.
if you are receiving data from a serial port, make sure you are using the right baudrate (and the other configs ) : decoding using (utf-8) but the wrong config will generate the same error
UnicodeDecodeError: 'utf-8' codec can't decode byte 0xff in position 0: invalid start byte
to check your serial port config on linux use : stty -F /dev/ttyUSBX -a
I had a similar issue and searched all the internet for this problem
if you have this problem just copy your HTML code in a new HTML file and use the normal <meta charset="UTF-8">
and it will work....
just create a new HTML file in the same location and use a different name
Check the path of the file to be read. My code kept on giving me errors until I changed the path name to present working directory. The error was:
newchars, decodedbytes = self.decode(data, self.errors)
UnicodeDecodeError: 'utf-8' codec can't decode byte 0xff in position 0: invalid start byte
If you are on a mac check if you for a hidden file, .DS_Store. After removing the file my program worked.
I had a similar problem.
Solved it by:
import io
with io.open(filename, 'r', encoding='utf-8') as fn:
lines = fn.readlines()
However, I had another problem. Some html files (in my case) were not utf-8, so I received a similar error. When I excluded those html files, everything worked smoothly.
So, except from fixing the code, check also the files you are reading from, maybe there is an incompatibility there indeed.
You have to use the encoding as latin1 to read this file as there are some special character in this file, use the below code snippet to read the file.
The problem here is the encoding type. When Python can't convert the data to be read, it gives an error.
You can you latin1 or other encoding values.
I say try and test to find the right one for your dataset.
I have the same issue when processing a file generated from Linux. It turns out it was related with files containing question marks..
Following code worked in my case:
df = pd.read_csv(filename,sep = '\t', encoding='cp1252')
If possible, open the file in a text editor and try to change the encoding to UTF-8. Otherwise do it programatically at the OS level.

Python can't write to a file despite printing perfectly fine

I'm running up against what I assume is some strange encoding error, but it's really baffling me. Basically I'm trying to write a unicode string to a file as an image, and the string representation is printed fine.
ìԉcïԁiԁúлt cúɭpâ ρáncéttá, ëɑ ëɭìt haϻ offícìà còлѕêɋûät. Sunt ԁësërúлt
but any way I try to write the string out to any relevant place I get the standard ascii encoding error:
UnicodeEncodeError: 'ascii' codec can't encode characters 0-3: ordinal not in range 128
I've tried setting the encoding of my source files, and ensuring that my system variable isn't set to ascii, and I've tried directly outputting to a file via:
python script.py > output.jpg
and none of it seems to have any effect. I feel a little silly for not being able to solve a simple encoding issue, but I've really got no clue as to where the ascii codec is even coming from at this point.
Relevant code:
def random_image(**kwargs):
image_array = numpy.random.rand(kwargs["dims"][0], kwargs["dims"][1], 3)*255
image = Image.fromarray(image_array.astype('uint8')).convert('RGBA')
format = kwargs.get("format", "JPEG")
output = StringIO.StringIO()
image.save(output, format=format)
content = output.getvalue()
output.close()
content = [str(ord(char)) for char in content]
return content
The first question is why do you store the contents of your image in the form of a Unicode string? Images typically contain arbitrary octets and should be represented with str (bytes in Python 3), not with the unicode type.
When you print a Unicode string to the screen, encoding is chosen based on the environment settings. When you print it to the file, you need to specify an encoding, otherwise ascii is assumed. To have your program default to something more sane for files, start it with:
encoding = sys.stdout.encoding or 'utf-8'
sys.stdout = codecs.getwriter(encoding)(sys.stdout, errors='replace')

Python Encoding\Decoding for writing to a text file

I've honestly spent a lot of time on this, and it's slowly killing me. I've stripped content from a PDF and stored it in an array. Now I'm trying to pull it back out of the array and write it into a txt file. However, I do not seem to be able to make it happen because of encoding issues.
allTheNTMs.append(contentRaw[s1:].encode("utf-8"))
for a in range(len(allTheNTMs)):
kmlDescription = allTheNTMs[a]
print kmlDescription #this prints out fine
outputFile.write(kmlDescription)
The error i'm getting is "unicodedecodeerror: ascii codec can't decode byte 0xc2 in position 213:ordinal not in range (128).
I'm just messing around now, but I've tried all kinds of ways to get this stuff to write out.
outputFile.write(kmlDescription).decode('utf-8')
Please forgive me if this is basic, I'm still learning Python (2.7).
Cheers!
EDIT1: Sample data looks something like the following:
Chart 3686 (plan, Morehead City) [ previous update 4997/11 ] NAD83 DATUM
Insert the accompanying block, showing amendments to coastline,
depths and dolphins, centred on: 34° 41´·19N., 76° 40´·43W.
Delete R 34° 43´·16N., 76° 41´·64W.
When I add the print type(raw), I get
Edit 2: When I just try to write the data, I receive the original error message (ascii codec can't decode byte...)
I will check out the suggested thread and video. Thanks folks!
Edit 3: I'm using Python 2.7
Edit 4: agf hit the nail on the head in the comments below when (s)he noticed that I was double encoding. I tried intentionally double encoding a string that had previously been working and produced the same error message that was originally thrown. Something like:
text = "Here's a string, but imagine it has some weird symbols and whatnot in it - apparently latin-1"
textEncoded = text.encode('utf-8')
textEncodedX2 = textEncoded.encode('utf-8')
outputfile.write(textEncoded) #Works!
outputfile.write(textEncodedX2) #failed
Once I figured out I was trying to double encode, the solution was the following:
allTheNTMs.append(contentRaw[s1:].encode("utf-8"))
for a in range(len(allTheNTMs)):
kmlDescription = allTheNTMs[a]
kmlDescriptionDecode = kmlDescription.decode("latin-1")
outputFile.write(kmlDescriptionDecode)
It's working now, and I sure appreciate all of your help!!
My guess is that output file you have opened has been opened with latin1 or even utf-8 codec hence you are not able to write utf-8 encoded data to that because it tries to reconvert it, otherwise to a normally opened file you can write any arbitrary data string, here is an example recreating similar error
u = u'सच्चिदानन्द हीरानन्द वात्स्यायन '
s = u.encode('utf-8')
f = codecs.open('del.text', 'wb',encoding='latin1')
f.write(s)
output:
Traceback (most recent call last):
File "/usr/lib/wingide4.1/src/debug/tserver/_sandbox.py", line 1, in <module>
# Used internally for debug sandbox under external interpreter
File "/usr/lib/python2.7/codecs.py", line 691, in write
return self.writer.write(data)
File "/usr/lib/python2.7/codecs.py", line 351, in write
data, consumed = self.encode(object, self.errors)
UnicodeDecodeError: 'ascii' codec can't decode byte 0xe0 in position 0: ordinal not in range(128)
Solution:
this will work, if you don't set any codec
f = open('del.txt', 'wb')
f.write(s)
other option is to directly write to file without encoding the unicode strings, if outputFile has been opened with correct codec e.g.
f = codecs.open('del.text', 'wb',encoding='utf-8')
f.write(u)
Your error message doesn't seem to appear to relate to any of your Python syntax but actually the fact you're trying to decode a Hex value which has no equivalent in UTF-8.
HEX 0xc2 appears to represent a latin character - an uppercase A with an accent on the top. Therefore, instead of using "allTheNTMs.append(contentRaw[s1:].encode("utf-8"))", try:-
allTheNTMs.append(contentRaw[s1:].encode("latin-1"))
I'm not an expert in Python so this may not work but it would appear you're trying to encode a latin character. Given the error message you are receiving too, it would appear that when trying to encode in UTF-8, Python only looks through the first 128 entries given that your error appears to indicate that entry "0Xc2" is out of range which indeed it is out of the first 128 entries of UTF-8.

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