Searchable database of files - python

I have 1000's of scanned field books as PDF. Each has a unique filename. In a spreadsheet I have metadata for each, where each row has:
index number, filename, info1, info2, info3, info4, etc.
filename is the exact file name of the PDF. info1 is just an example of a metadata field, such as 'Year' or whatever. There are only about 8 fields or so, not ever PDF is relevant to all of them.
I assume there should be a reasonable way to create a database, mysql, or other, reading the spreadsheet (which I can just saves as .csv or .txt or something). This part I am sure I can handle.
I want to be able to lookup/search for a pdf file based on entering in various search items based on the metadata, and get a list of results. In a web interface, or a custom window, and be able to click on the results and open the file. Basically a typical search window with predefined fields you can enter and get results - like at an old school library terminal.
I have decent coding skills in python, mostly math, but some file skills as well. Looking for guidance on what tools and approach I should take to this. My short term goal is to be able to query and find files and open whatever results. Long term want to be able to share this with the public so they can search and find stuff.
After trying to figure out what to search for online, I am obviously at a loss. How do you suggest I do this and what tools or libraries should I use. I cannot find an example of this online. Not sure how to word it.

The actual data stuff could be done with Pandas:
read the excel file into Pandas
perform the search on the Pandas dataframe, e.g. using df.query()
But this does not give you a GUI. For that you could go for a web app, using Flask or Django framework. That, however, one does not master over night :)
This is a good course to learn that kind of stuff: https://www.edx.org/course/cs50s-web-programming-with-python-and-javascript?index=product&queryID=01efddd992de28a8b1b27d136111a2a8&position=3

Related

How to use Python to automate the movement of data between two Excel workbooks with specific parameters

Thanks for taking the time to read my question.
I am working on a personal project to learn python scripting for excel, and I want to learn how to move data from one workbook to another.
In this example, I am emulating a company employee ledger that has name, position, address, and more (The organizations is by row so every employee takes up one row). But the project is to have a selected number of people be transferred to a new ledger (another excel file). So I have a list of emails in a .txt file (it could even be another excel file but I thought .txt would be easier), and I would want the script to run through the .txt file, get the emails, and look for any rows that have a matching email address(all emails are in cell 'B'). And if any are found, then copy that entire row to the new excel file.
I tried a lot of ways to make this work, but I could not figure it out. I am really new to python so I am not even sure if this is possible. Would really appreciate some help!
You have essentially two packages that will allow manipulation of Excel files. For reading in data and performing analysis the standard package for use is pandas. You can save the files as .xlsx however you are only really working with base table data and not the file itself (IE, you are extracing data FROM the file, not working WITH the file)
However what you need is really to perform manipulation on Excel files directly which is better done with openpyxl
You can also read files (such as your text file) using with open function that is native to Python and is not a third party import like pandas or openpyxl.
Part of learning to program includes learning how to use documentation.
As such, here is the documentation you require with sufficient examples to learn openpyxl: https://openpyxl.readthedocs.io/en/stable/
And you can learn about pandas here: https://pandas.pydata.org/docs/user_guide/index.html
And you can learn about python with open here: https://docs.python.org/3/tutorial/inputoutput.html
Hope this helps.
EDIT: It's possible I or another person can give you a specific example using your data / code etc, but you would have to provide it fully. Since you're learning, I suggest using the documentation or youtube.

How to convert pdf to xml /json using python code

Can any one help me on how to convert pdf file to xml file using python code? My pdf contains:
Unstructured data
It has images
Mathematical equations
Chemical Equations
Table Data
Logo's tag's etc.
I tried using PDFMiner, but my pdf data was not converted into .xml/json file format. Are there any libraries other than PDFMiner? PyPDF2, Tabula-py, PDFQuery, comelot, PyMuPDF, pdf to dox, pandas- these other libraries/utilities all not suitable for my requirement.
Please advise me on any other options. Thank you.
The first thing I would recommend you trying is GROBID (see here for the full documentation). You can play with an online demo here to see if fits your needs (select TEI -> Process Fulltext Document, and upload a PDF). You can also check out this from the Allen Institute (it is based on GROBID and has a handy function for converting TEI.XML to JSON).
The other package which--obviously--does a good job is the Adobe PDF Extract API (see here). It's of course a paid service but when you register for an account you get 1.000 document transactions for free. It's easy to implement in Python, well documented, and a good way for experimenting and getting a feel for the difficulties of reliable data extraction from PDF.
I worked with both options to extract text, figures, tables etc. from scientific papers. Both yielded good results. The main problem with out-of-the-box solutions is that, when you work with complex formats (or badly formatted docs), erroneously identified document elements are quite common (for example a footnote or a header gets merged with the main text). Both options are based on machine learning models and, at least for GROBID, it is possible to retrain these models for your specific task (I haven't tried this so far, so I don't know how worthwhile it is).
However, if your target PDFs are all of the same (simple) format (or if you can control their format) you should be fine with either option.

How to create a dynamic form with python using translated text as input?

I have an original text that I want to translate. I normally do it manually but I know I could save a lot of time translating automatically the most frequent words and expressions.
I will find out how to translate simple words, the problem is not here. I have read some books on python and I think using string manipulations can be done.
But I am lost about how to create the output file.
The output file will contain:
short empty forms ready to be filled wherever there is text that has not been translated
the translated words wherever they were in the original file
In the output file I will fill manually the empty forms, after pressing Tab the cursor should jump to the next exmpty form
I am lost here, I know how to do forms on html but the language I am used to is Python.
I would like to know what modules from Python I could use. I need some guidance on this.
Can you recommend me a book or a tool that explains how to do something similar to this?
This is what I want to do, assuming I have managed to create a simple database to translate colors from Spanish to English.
The first step contains the original file.
The second step contains the automatic translation.
In the third step I complete the manual translation.
After finishing everything is grouped into a normal txt file ready to be used.
I think it is quite clear. I don't expect people to tell me the code to do this, I just need to know what tools could be used to achieve my goal.
Thanks for editing.
To create an interface that works with a web browser, Flask for Python is a good method for creating webforms. There are tutorials available.
One method for storing data would be an SQLite file. That may be more than you need, so I'd recommend starting with a CSV file. Libraries exist in Python for both CSVs and SQLite.

How to create pdfs from rows in a dataset and save them

Very general question here. Need ideas. I have a dataset with about 20 rows. I want to use python or R to automatically take each of these rows and create 1 pdf per row. The pdf is formatted in a particular way that I need to be able to play around with.
Imagine each row is a student's name, and I need to make a pdf "Report Card" for each student. The report card will have a designated spot that says "Math Grade" and then the value will come from the dataset.
I want to be able to hit run, and have all 20 of the pdfs save to a folder on my machine. Eventually, I may try to have this run on a server or something so it is fully automatic. The pdfs ultimately get emailed out to a distribution list.
I am very pretty familiar with R, and mildly familiar with Python. I have no experience in HTML, but is that what I need here?
Any tutorials, ideas, explanations of the process I should use would be appreciated.
I thought about using plot.ly.dash. But I think that is mostly for viewing in a web browser. I want pdfs, so I don't know if that will work.

I need a starting point to code an app to extract text from pdf to excel

To start I just want to state that I'm an Electrical Engineer with basic knowledge of programming.
My requirement is as follows:
I want to create an app where I can load and view PDF files that
contain tables.
These PDF files tables are of irregular shapes and in a different
position on every page. (that's why tools like tabular couldn't help
me)
Each table entry is multiline and of irregular dimensions (I cannot
select a whole row at a time it has to be each element alone. simply
copying the lines to excel won't work either because it will need a
lot of formatting)
So I want to be able to select each table entry individually from the
table (like a selection or cropping box over the required text),
delete new line if there is a new line in the text and just keep spaces.
The generated excel (or access database I do not really mind any)
should be reviewable and saveable (if those are even words XD).
I have a good knowledge of python and a very elementary knowledge of Django and I'm seeking some expert who can tell me what do I really need to learn (and if possible where to learn it) to execute my project.
Is it very much for me to execute and if I can dedicate 10 hours a week, how much would it take me to execute such a project.
Thanks all for your help in advance.
Don't use Python, use Word. Open the pdf, then step through the tables collection to collect the data and put it into excel. See this for an example
Here are the advises i can provide you :
first of all, ask internet for questions :
https://lmddgtfy.net/?q=python%20library%20tabular%20pdf
-> Camelot , which is mentioned multiple time seems to be relevant
For the use of excel sheet, i present you one of the most famous library for manipulating DataFrame: Pandas
You can use small courses on internet which will offer you a quick ability to manage your project easier.
for the application, you can easily find on youtube courses on a library made by someone who will explain you how to do a basic application. It could offer you the entry point you are talking about. Then, You can just wonder what else do you need or simply want for making it better.
for the time needed, it depends on how much time do you need to understand the basics, how much time you spend on having a deeper comprehension. I think in one week, working during your free time with a real interest, it could be working( not perfect, but working, which is a good beginning)
PS: I am not sure if your question is relevant for the aims of stackoverflow. I suggest you to read this file. ( https://stackoverflow.com/help/how-to-ask)

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